CuGenDBv2

Gene ID	Spg001822
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	nuclear pore complex protein GP210 isoform X1
Genome location	scaffold10:2312865..2318303
RNA-Seq Expression	Spg001822
Synteny	Spg001822
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0003723 - RNA binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6581051.1 Nuclear pore complex protein 210, partial [Cucurbita argyrosperma subsp. sororia]

1.5e-185

86.65

Show/hide

Query:  LASFNDQLSGRWITTNESVVSVDTHSGVAEAVGPGSTEVLFEGSNLNLRTTVTVQNGYTVSVIAPVEILTNVPFPAKGYNFSVNFSGKDGTLLNDKRVLH
        +  FN QLSGRW TTN SV+SVD  SG+AEAVGPGSTEVLFEGSNLNLRTT TVQ GYT+SV+AP EILTNVPFPAKGYNFSVNFSGK GTLLNDKRVLH
Subjt:  LASFNDQLSGRWITTNESVVSVDTHSGVAEAVGPGSTEVLFEGSNLNLRTTVTVQNGYTVSVIAPVEILTNVPFPAKGYNFSVNFSGKDGTLLNDKRVLH

Query:  DCRVDPPFVGYAKPWLDLDYGNLYCLFFPYSPEHLAHSVPQLKAMRPDISVTIYASSREANQISGSASALFIGGFSVMEMGKSATQLILTPDSNKTVITI
        DCRVDP FVGYAKPWLDLD  N YCLFFPYSPEHLAHS P+LKAMRPDISVTIYASSRE +QISGSASALFIGGFSVMEMGKSATQLILTPDSNKTVITI
Subjt:  DCRVDPPFVGYAKPWLDLDYGNLYCLFFPYSPEHLAHSVPQLKAMRPDISVTIYASSREANQISGSASALFIGGFSVMEMGKSATQLILTPDSNKTVITI

Query:  LGNTDVELHWHERDLVIVGPISKEESGIAGRTEYEVKAMGTKRFKDKILITLAANGQRTEIDVFYEPREREAPETTFDATTIWATILGSLSLLILTITLF
        LGNTDVEL+ HERDLVI+GPISKE+SG+ G +EYEVKAMGTKRFKDKI+ITLAANGQRTEIDVFYEPRE+E     F  TTIWATILGSL LLILTI LF
Subjt:  LGNTDVELHWHERDLVIVGPISKEESGIAGRTEYEVKAMGTKRFKDKILITLAANGQRTEIDVFYEPREREAPETTFDATTIWATILGSLSLLILTITLF

Query:  ICFMDKPNRA---QPSQPSRPAITHTPTVTAPVTPDRRSPVVSNEQSPRTPQPFVDYVRQTIDETPYYKREGRRRFNVQNTF
        ICF+DKPNRA   QPSQPSRPA THTPT+TAPVTPDR SPV+SNEQSPRTPQPFVDYVRQTIDETPYYKREGRRRFNVQNTF
Subjt:  ICFMDKPNRA---QPSQPSRPAITHTPTVTAPVTPDRRSPVVSNEQSPRTPQPFVDYVRQTIDETPYYKREGRRRFNVQNTF

XP_022934340.1 nuclear pore complex protein GP210 isoform X1 [Cucurbita moschata]

1.0e-186

87.07

Show/hide

Query:  LASFNDQLSGRWITTNESVVSVDTHSGVAEAVGPGSTEVLFEGSNLNLRTTVTVQNGYTVSVIAPVEILTNVPFPAKGYNFSVNFSGKDGTLLNDKRVLH
        +  FN QLSGRW TTN SV+SVD  SG+A+AVGPGSTEVLFEGSNLNLRTT TVQ GYT+SV+AP EILTNVPFPAKGYNFSVNFSGK GTLLNDKRVLH
Subjt:  LASFNDQLSGRWITTNESVVSVDTHSGVAEAVGPGSTEVLFEGSNLNLRTTVTVQNGYTVSVIAPVEILTNVPFPAKGYNFSVNFSGKDGTLLNDKRVLH

Query:  DCRVDPPFVGYAKPWLDLDYGNLYCLFFPYSPEHLAHSVPQLKAMRPDISVTIYASSREANQISGSASALFIGGFSVMEMGKSATQLILTPDSNKTVITI
        DCRVDP FVGYAKPWLDLD  N YCLFFPYSPEHLAHS P+LKAMRPDISVTIYASSRE +QISGSASALFIGGFSVMEMGKSATQLILTPDSNKTVITI
Subjt:  DCRVDPPFVGYAKPWLDLDYGNLYCLFFPYSPEHLAHSVPQLKAMRPDISVTIYASSREANQISGSASALFIGGFSVMEMGKSATQLILTPDSNKTVITI

Query:  LGNTDVELHWHERDLVIVGPISKEESGIAGRTEYEVKAMGTKRFKDKILITLAANGQRTEIDVFYEPREREAPETTFDATTIWATILGSLSLLILTITLF
        LGNTDVEL+ HERDLVI+GPISKE+SG+ G +EYEVKAMGTKRFKDKI+ITLAANGQRTEIDVFYEPRE+E     F  TTIWATILGSL LLILTI LF
Subjt:  LGNTDVELHWHERDLVIVGPISKEESGIAGRTEYEVKAMGTKRFKDKILITLAANGQRTEIDVFYEPREREAPETTFDATTIWATILGSLSLLILTITLF

Query:  ICFMDKPNRAQPSQPSRPAITHTPTVTAPVTPDRRSPVVSNEQSPRTPQPFVDYVRQTIDETPYYKREGRRRFNVQNTF
        ICF+DKPNRAQPSQPSRPA THTPT+TAPVTPDR SPV+SNEQSPRTPQPFVDYVRQTIDETPYYKREGRRRFNVQNTF
Subjt:  ICFMDKPNRAQPSQPSRPAITHTPTVTAPVTPDRRSPVVSNEQSPRTPQPFVDYVRQTIDETPYYKREGRRRFNVQNTF

XP_022934341.1 nuclear pore complex protein GP210 isoform X2 [Cucurbita moschata]

1.0e-186

87.07

Show/hide

Query:  LASFNDQLSGRWITTNESVVSVDTHSGVAEAVGPGSTEVLFEGSNLNLRTTVTVQNGYTVSVIAPVEILTNVPFPAKGYNFSVNFSGKDGTLLNDKRVLH
        +  FN QLSGRW TTN SV+SVD  SG+A+AVGPGSTEVLFEGSNLNLRTT TVQ GYT+SV+AP EILTNVPFPAKGYNFSVNFSGK GTLLNDKRVLH
Subjt:  LASFNDQLSGRWITTNESVVSVDTHSGVAEAVGPGSTEVLFEGSNLNLRTTVTVQNGYTVSVIAPVEILTNVPFPAKGYNFSVNFSGKDGTLLNDKRVLH

Query:  DCRVDPPFVGYAKPWLDLDYGNLYCLFFPYSPEHLAHSVPQLKAMRPDISVTIYASSREANQISGSASALFIGGFSVMEMGKSATQLILTPDSNKTVITI
        DCRVDP FVGYAKPWLDLD  N YCLFFPYSPEHLAHS P+LKAMRPDISVTIYASSRE +QISGSASALFIGGFSVMEMGKSATQLILTPDSNKTVITI
Subjt:  DCRVDPPFVGYAKPWLDLDYGNLYCLFFPYSPEHLAHSVPQLKAMRPDISVTIYASSREANQISGSASALFIGGFSVMEMGKSATQLILTPDSNKTVITI

Query:  LGNTDVELHWHERDLVIVGPISKEESGIAGRTEYEVKAMGTKRFKDKILITLAANGQRTEIDVFYEPREREAPETTFDATTIWATILGSLSLLILTITLF
        LGNTDVEL+ HERDLVI+GPISKE+SG+ G +EYEVKAMGTKRFKDKI+ITLAANGQRTEIDVFYEPRE+E     F  TTIWATILGSL LLILTI LF
Subjt:  LGNTDVELHWHERDLVIVGPISKEESGIAGRTEYEVKAMGTKRFKDKILITLAANGQRTEIDVFYEPREREAPETTFDATTIWATILGSLSLLILTITLF

Query:  ICFMDKPNRAQPSQPSRPAITHTPTVTAPVTPDRRSPVVSNEQSPRTPQPFVDYVRQTIDETPYYKREGRRRFNVQNTF
        ICF+DKPNRAQPSQPSRPA THTPT+TAPVTPDR SPV+SNEQSPRTPQPFVDYVRQTIDETPYYKREGRRRFNVQNTF
Subjt:  ICFMDKPNRAQPSQPSRPAITHTPTVTAPVTPDRRSPVVSNEQSPRTPQPFVDYVRQTIDETPYYKREGRRRFNVQNTF

XP_022982533.1 nuclear pore complex protein GP210 isoform X1 [Cucurbita maxima]

1.3e-186

87.34

Show/hide

Query:  LASFNDQLSGRWITTNESVVSVDTHSGVAEAVGPGSTEVLFEGSNLNLRTTVTVQNGYTVSVIAPVEILTNVPFPAKGYNFSVNFSGKDGTLLNDKRVLH
        +  FN QLSGRW TTN SV+SVD  SG+AEAVGPGSTEVLFEGSNLNLRTT TVQ GYT+SV+AP EILTNVPFPAKGYNFSVN SGK GTLLNDKRVLH
Subjt:  LASFNDQLSGRWITTNESVVSVDTHSGVAEAVGPGSTEVLFEGSNLNLRTTVTVQNGYTVSVIAPVEILTNVPFPAKGYNFSVNFSGKDGTLLNDKRVLH

Query:  DCRVDPPFVGYAKPWLDLDYGNLYCLFFPYSPEHLAHSVPQLKAMRPDISVTIYASSREANQISGSASALFIGGFSVMEMGKSATQLILTPDSNKTVITI
        DCRVDP FVGYAKPWLDLD  NLYCLFFPYSPEHLAHS P+ KAMRPDISVTIYASSRE +QISGSASALFIGGFSVMEMGKSATQLILTPDSNKTVITI
Subjt:  DCRVDPPFVGYAKPWLDLDYGNLYCLFFPYSPEHLAHSVPQLKAMRPDISVTIYASSREANQISGSASALFIGGFSVMEMGKSATQLILTPDSNKTVITI

Query:  LGNTDVELHWHERDLVIVGPISKEESGIAGRTEYEVKAMGTKRFKDKILITLAANGQRTEIDVFYEPREREAPETTFDATTIWATILGSLSLLILTITLF
        LGNTDVEL+ HERDLVIVGPISKE+SG+ G +EYEVKAMGTKRFKDKI+ITLAANGQRTEIDVFYEPRE+E     F  TTIWATILGSL LLILTI LF
Subjt:  LGNTDVELHWHERDLVIVGPISKEESGIAGRTEYEVKAMGTKRFKDKILITLAANGQRTEIDVFYEPREREAPETTFDATTIWATILGSLSLLILTITLF

Query:  ICFMDKPNRAQPSQPSRPAITHTPTVTAPVTPDRRSPVVSNEQSPRTPQPFVDYVRQTIDETPYYKREGRRRFNVQNTF
        ICF+DKPNRAQPSQPSRPA THTPT+TAPVTPDR SPV+SNEQSPRTPQPFVDYVRQTIDETPYYKREGRRRFNVQNTF
Subjt:  ICFMDKPNRAQPSQPSRPAITHTPTVTAPVTPDRRSPVVSNEQSPRTPQPFVDYVRQTIDETPYYKREGRRRFNVQNTF

XP_022982534.1 nuclear pore complex protein GP210 isoform X2 [Cucurbita maxima]

1.3e-186

87.34

Show/hide

Query:  LASFNDQLSGRWITTNESVVSVDTHSGVAEAVGPGSTEVLFEGSNLNLRTTVTVQNGYTVSVIAPVEILTNVPFPAKGYNFSVNFSGKDGTLLNDKRVLH
        +  FN QLSGRW TTN SV+SVD  SG+AEAVGPGSTEVLFEGSNLNLRTT TVQ GYT+SV+AP EILTNVPFPAKGYNFSVN SGK GTLLNDKRVLH
Subjt:  LASFNDQLSGRWITTNESVVSVDTHSGVAEAVGPGSTEVLFEGSNLNLRTTVTVQNGYTVSVIAPVEILTNVPFPAKGYNFSVNFSGKDGTLLNDKRVLH

Query:  DCRVDPPFVGYAKPWLDLDYGNLYCLFFPYSPEHLAHSVPQLKAMRPDISVTIYASSREANQISGSASALFIGGFSVMEMGKSATQLILTPDSNKTVITI
        DCRVDP FVGYAKPWLDLD  NLYCLFFPYSPEHLAHS P+ KAMRPDISVTIYASSRE +QISGSASALFIGGFSVMEMGKSATQLILTPDSNKTVITI
Subjt:  DCRVDPPFVGYAKPWLDLDYGNLYCLFFPYSPEHLAHSVPQLKAMRPDISVTIYASSREANQISGSASALFIGGFSVMEMGKSATQLILTPDSNKTVITI

Query:  LGNTDVELHWHERDLVIVGPISKEESGIAGRTEYEVKAMGTKRFKDKILITLAANGQRTEIDVFYEPREREAPETTFDATTIWATILGSLSLLILTITLF
        LGNTDVEL+ HERDLVIVGPISKE+SG+ G +EYEVKAMGTKRFKDKI+ITLAANGQRTEIDVFYEPRE+E     F  TTIWATILGSL LLILTI LF
Subjt:  LGNTDVELHWHERDLVIVGPISKEESGIAGRTEYEVKAMGTKRFKDKILITLAANGQRTEIDVFYEPREREAPETTFDATTIWATILGSLSLLILTITLF

Query:  ICFMDKPNRAQPSQPSRPAITHTPTVTAPVTPDRRSPVVSNEQSPRTPQPFVDYVRQTIDETPYYKREGRRRFNVQNTF
        ICF+DKPNRAQPSQPSRPA THTPT+TAPVTPDR SPV+SNEQSPRTPQPFVDYVRQTIDETPYYKREGRRRFNVQNTF
Subjt:  ICFMDKPNRAQPSQPSRPAITHTPTVTAPVTPDRRSPVVSNEQSPRTPQPFVDYVRQTIDETPYYKREGRRRFNVQNTF

TrEMBL top hits

e value

%identity

Alignment

A0A1S4E5N1 nuclear pore complex protein GP210 isoform X2

8.7e-184

85.79

Show/hide

Query:  LASFNDQLSGRWITTNESVVSVDTHSGVAEAVGPGSTEVLFEGSNLNLRTTVTVQNGYTVSVIAPVEILTNVPFPAKGYNFSVNFSGKDGTLLNDKRVLH
        +  F  Q SGRWI+TNESV+SVD  SG+AEAVGPGSTEVLFEGSNLNLRTTVTVQ G+T+SV+APVEILTNVPFPAKGYNFSVNF G+ G LLNDKRVLH
Subjt:  LASFNDQLSGRWITTNESVVSVDTHSGVAEAVGPGSTEVLFEGSNLNLRTTVTVQNGYTVSVIAPVEILTNVPFPAKGYNFSVNFSGKDGTLLNDKRVLH

Query:  DCRVDPPFVGYAKPWLDLDYGNLYCLFFPYSPEHLAHSVPQLKAMRPDISVTIYASSREANQISGSASALFIGGFSVMEMGKSATQLILTPDSNKTVITI
        DCRVDPPFVGYAKPWLD DY N YCLFFPYSPEHLA S  + KAMRPDISVTIYASSRE++QI GSASALF+GGFSVMEM KSATQLILTPDSNKT ITI
Subjt:  DCRVDPPFVGYAKPWLDLDYGNLYCLFFPYSPEHLAHSVPQLKAMRPDISVTIYASSREANQISGSASALFIGGFSVMEMGKSATQLILTPDSNKTVITI

Query:  LGNTDVELHWHERDLVIVGPISKEESGIAGRTEYEVKAMGTKRFKDKILITLAANGQRTEIDVFYEPREREAPETTFDATTIWATILGSLSLLILTITLF
        LGNTDVELHWHERDLVIVGPISKEESG+ GR EYEVKAMGTKRF+DKILITLAANGQRTEIDV Y+P E+EA ET FD TTIWAT+LGSLSLLILTITLF
Subjt:  LGNTDVELHWHERDLVIVGPISKEESGIAGRTEYEVKAMGTKRFKDKILITLAANGQRTEIDVFYEPREREAPETTFDATTIWATILGSLSLLILTITLF

Query:  ICFMDKPNRAQPSQPS-RPAITHTPTVTAPVTPDRRSPVVSNEQSPRTPQPFVDYVRQTIDETPYYKREGRRRFNVQNTF
        IC++DKPNRAQPSQPS   A THTPTVTAP TPDR SPV+SNEQSPRTPQPFVDYVRQTIDETPYYKREGRRRFNVQNTF
Subjt:  ICFMDKPNRAQPSQPS-RPAITHTPTVTAPVTPDRRSPVVSNEQSPRTPQPFVDYVRQTIDETPYYKREGRRRFNVQNTF

A0A6J1F1J2 nuclear pore complex protein GP210 isoform X2

4.9e-187

87.07

Show/hide

Query:  LASFNDQLSGRWITTNESVVSVDTHSGVAEAVGPGSTEVLFEGSNLNLRTTVTVQNGYTVSVIAPVEILTNVPFPAKGYNFSVNFSGKDGTLLNDKRVLH
        +  FN QLSGRW TTN SV+SVD  SG+A+AVGPGSTEVLFEGSNLNLRTT TVQ GYT+SV+AP EILTNVPFPAKGYNFSVNFSGK GTLLNDKRVLH
Subjt:  LASFNDQLSGRWITTNESVVSVDTHSGVAEAVGPGSTEVLFEGSNLNLRTTVTVQNGYTVSVIAPVEILTNVPFPAKGYNFSVNFSGKDGTLLNDKRVLH

Query:  DCRVDPPFVGYAKPWLDLDYGNLYCLFFPYSPEHLAHSVPQLKAMRPDISVTIYASSREANQISGSASALFIGGFSVMEMGKSATQLILTPDSNKTVITI
        DCRVDP FVGYAKPWLDLD  N YCLFFPYSPEHLAHS P+LKAMRPDISVTIYASSRE +QISGSASALFIGGFSVMEMGKSATQLILTPDSNKTVITI
Subjt:  DCRVDPPFVGYAKPWLDLDYGNLYCLFFPYSPEHLAHSVPQLKAMRPDISVTIYASSREANQISGSASALFIGGFSVMEMGKSATQLILTPDSNKTVITI

Query:  LGNTDVELHWHERDLVIVGPISKEESGIAGRTEYEVKAMGTKRFKDKILITLAANGQRTEIDVFYEPREREAPETTFDATTIWATILGSLSLLILTITLF
        LGNTDVEL+ HERDLVI+GPISKE+SG+ G +EYEVKAMGTKRFKDKI+ITLAANGQRTEIDVFYEPRE+E     F  TTIWATILGSL LLILTI LF
Subjt:  LGNTDVELHWHERDLVIVGPISKEESGIAGRTEYEVKAMGTKRFKDKILITLAANGQRTEIDVFYEPREREAPETTFDATTIWATILGSLSLLILTITLF

Query:  ICFMDKPNRAQPSQPSRPAITHTPTVTAPVTPDRRSPVVSNEQSPRTPQPFVDYVRQTIDETPYYKREGRRRFNVQNTF
        ICF+DKPNRAQPSQPSRPA THTPT+TAPVTPDR SPV+SNEQSPRTPQPFVDYVRQTIDETPYYKREGRRRFNVQNTF
Subjt:  ICFMDKPNRAQPSQPSRPAITHTPTVTAPVTPDRRSPVVSNEQSPRTPQPFVDYVRQTIDETPYYKREGRRRFNVQNTF

A0A6J1F7E5 nuclear pore complex protein GP210 isoform X1

4.9e-187

87.07

Show/hide

Query:  LASFNDQLSGRWITTNESVVSVDTHSGVAEAVGPGSTEVLFEGSNLNLRTTVTVQNGYTVSVIAPVEILTNVPFPAKGYNFSVNFSGKDGTLLNDKRVLH
        +  FN QLSGRW TTN SV+SVD  SG+A+AVGPGSTEVLFEGSNLNLRTT TVQ GYT+SV+AP EILTNVPFPAKGYNFSVNFSGK GTLLNDKRVLH
Subjt:  LASFNDQLSGRWITTNESVVSVDTHSGVAEAVGPGSTEVLFEGSNLNLRTTVTVQNGYTVSVIAPVEILTNVPFPAKGYNFSVNFSGKDGTLLNDKRVLH

Query:  DCRVDPPFVGYAKPWLDLDYGNLYCLFFPYSPEHLAHSVPQLKAMRPDISVTIYASSREANQISGSASALFIGGFSVMEMGKSATQLILTPDSNKTVITI
        DCRVDP FVGYAKPWLDLD  N YCLFFPYSPEHLAHS P+LKAMRPDISVTIYASSRE +QISGSASALFIGGFSVMEMGKSATQLILTPDSNKTVITI
Subjt:  DCRVDPPFVGYAKPWLDLDYGNLYCLFFPYSPEHLAHSVPQLKAMRPDISVTIYASSREANQISGSASALFIGGFSVMEMGKSATQLILTPDSNKTVITI

Query:  LGNTDVELHWHERDLVIVGPISKEESGIAGRTEYEVKAMGTKRFKDKILITLAANGQRTEIDVFYEPREREAPETTFDATTIWATILGSLSLLILTITLF
        LGNTDVEL+ HERDLVI+GPISKE+SG+ G +EYEVKAMGTKRFKDKI+ITLAANGQRTEIDVFYEPRE+E     F  TTIWATILGSL LLILTI LF
Subjt:  LGNTDVELHWHERDLVIVGPISKEESGIAGRTEYEVKAMGTKRFKDKILITLAANGQRTEIDVFYEPREREAPETTFDATTIWATILGSLSLLILTITLF

Query:  ICFMDKPNRAQPSQPSRPAITHTPTVTAPVTPDRRSPVVSNEQSPRTPQPFVDYVRQTIDETPYYKREGRRRFNVQNTF
        ICF+DKPNRAQPSQPSRPA THTPT+TAPVTPDR SPV+SNEQSPRTPQPFVDYVRQTIDETPYYKREGRRRFNVQNTF
Subjt:  ICFMDKPNRAQPSQPSRPAITHTPTVTAPVTPDRRSPVVSNEQSPRTPQPFVDYVRQTIDETPYYKREGRRRFNVQNTF

A0A6J1J4U8 nuclear pore complex protein GP210 isoform X2

6.4e-187

87.34

Show/hide

Query:  LASFNDQLSGRWITTNESVVSVDTHSGVAEAVGPGSTEVLFEGSNLNLRTTVTVQNGYTVSVIAPVEILTNVPFPAKGYNFSVNFSGKDGTLLNDKRVLH
        +  FN QLSGRW TTN SV+SVD  SG+AEAVGPGSTEVLFEGSNLNLRTT TVQ GYT+SV+AP EILTNVPFPAKGYNFSVN SGK GTLLNDKRVLH
Subjt:  LASFNDQLSGRWITTNESVVSVDTHSGVAEAVGPGSTEVLFEGSNLNLRTTVTVQNGYTVSVIAPVEILTNVPFPAKGYNFSVNFSGKDGTLLNDKRVLH

Query:  DCRVDPPFVGYAKPWLDLDYGNLYCLFFPYSPEHLAHSVPQLKAMRPDISVTIYASSREANQISGSASALFIGGFSVMEMGKSATQLILTPDSNKTVITI
        DCRVDP FVGYAKPWLDLD  NLYCLFFPYSPEHLAHS P+ KAMRPDISVTIYASSRE +QISGSASALFIGGFSVMEMGKSATQLILTPDSNKTVITI
Subjt:  DCRVDPPFVGYAKPWLDLDYGNLYCLFFPYSPEHLAHSVPQLKAMRPDISVTIYASSREANQISGSASALFIGGFSVMEMGKSATQLILTPDSNKTVITI

Query:  LGNTDVELHWHERDLVIVGPISKEESGIAGRTEYEVKAMGTKRFKDKILITLAANGQRTEIDVFYEPREREAPETTFDATTIWATILGSLSLLILTITLF
        LGNTDVEL+ HERDLVIVGPISKE+SG+ G +EYEVKAMGTKRFKDKI+ITLAANGQRTEIDVFYEPRE+E     F  TTIWATILGSL LLILTI LF
Subjt:  LGNTDVELHWHERDLVIVGPISKEESGIAGRTEYEVKAMGTKRFKDKILITLAANGQRTEIDVFYEPREREAPETTFDATTIWATILGSLSLLILTITLF

Query:  ICFMDKPNRAQPSQPSRPAITHTPTVTAPVTPDRRSPVVSNEQSPRTPQPFVDYVRQTIDETPYYKREGRRRFNVQNTF
        ICF+DKPNRAQPSQPSRPA THTPT+TAPVTPDR SPV+SNEQSPRTPQPFVDYVRQTIDETPYYKREGRRRFNVQNTF
Subjt:  ICFMDKPNRAQPSQPSRPAITHTPTVTAPVTPDRRSPVVSNEQSPRTPQPFVDYVRQTIDETPYYKREGRRRFNVQNTF

A0A6J1J529 nuclear pore complex protein GP210 isoform X1

6.4e-187

87.34

Show/hide

Query:  LASFNDQLSGRWITTNESVVSVDTHSGVAEAVGPGSTEVLFEGSNLNLRTTVTVQNGYTVSVIAPVEILTNVPFPAKGYNFSVNFSGKDGTLLNDKRVLH
        +  FN QLSGRW TTN SV+SVD  SG+AEAVGPGSTEVLFEGSNLNLRTT TVQ GYT+SV+AP EILTNVPFPAKGYNFSVN SGK GTLLNDKRVLH
Subjt:  LASFNDQLSGRWITTNESVVSVDTHSGVAEAVGPGSTEVLFEGSNLNLRTTVTVQNGYTVSVIAPVEILTNVPFPAKGYNFSVNFSGKDGTLLNDKRVLH

Query:  DCRVDPPFVGYAKPWLDLDYGNLYCLFFPYSPEHLAHSVPQLKAMRPDISVTIYASSREANQISGSASALFIGGFSVMEMGKSATQLILTPDSNKTVITI
        DCRVDP FVGYAKPWLDLD  NLYCLFFPYSPEHLAHS P+ KAMRPDISVTIYASSRE +QISGSASALFIGGFSVMEMGKSATQLILTPDSNKTVITI
Subjt:  DCRVDPPFVGYAKPWLDLDYGNLYCLFFPYSPEHLAHSVPQLKAMRPDISVTIYASSREANQISGSASALFIGGFSVMEMGKSATQLILTPDSNKTVITI

Query:  LGNTDVELHWHERDLVIVGPISKEESGIAGRTEYEVKAMGTKRFKDKILITLAANGQRTEIDVFYEPREREAPETTFDATTIWATILGSLSLLILTITLF
        LGNTDVEL+ HERDLVIVGPISKE+SG+ G +EYEVKAMGTKRFKDKI+ITLAANGQRTEIDVFYEPRE+E     F  TTIWATILGSL LLILTI LF
Subjt:  LGNTDVELHWHERDLVIVGPISKEESGIAGRTEYEVKAMGTKRFKDKILITLAANGQRTEIDVFYEPREREAPETTFDATTIWATILGSLSLLILTITLF

Query:  ICFMDKPNRAQPSQPSRPAITHTPTVTAPVTPDRRSPVVSNEQSPRTPQPFVDYVRQTIDETPYYKREGRRRFNVQNTF
        ICF+DKPNRAQPSQPSRPA THTPT+TAPVTPDR SPV+SNEQSPRTPQPFVDYVRQTIDETPYYKREGRRRFNVQNTF
Subjt:  ICFMDKPNRAQPSQPSRPAITHTPTVTAPVTPDRRSPVVSNEQSPRTPQPFVDYVRQTIDETPYYKREGRRRFNVQNTF

SwissProt top hits

e value

%identity

Alignment

F4KHD8 Nuclear pore complex protein GP210

1.8e-85

45.21

Show/hide

Query:  NDQLSGRWITTNESVVSVDTHSGVAEAVGPGSTEVLFEGSNLNLRTTVTVQNGYTVSVIAPVEILTNVPFPAKGYNFSVNF-SGKDGTLLNDKRVLHDCR
        +++++G+W T+N SV+SV+  SG A+A+  GST V F+G  L L+T VTV  G T+ V +P E LTNV  PA+GY F V F   K     +  +   +C+
Subjt:  NDQLSGRWITTNESVVSVDTHSGVAEAVGPGSTEVLFEGSNLNLRTTVTVQNGYTVSVIAPVEILTNVPFPAKGYNFSVNF-SGKDGTLLNDKRVLHDCR

Query:  VDPPFVGYAKPWLDLDYGNLYCLFFPYSPEHLAHSVPQLKAMRPDISVTIYASSREANQISGSASALFIGGFSVMEMGKSATQLILTPDSNKTVITILGN
        VDPPF+GY KPW+DLD GN YCLFFPYSPEHL HS+   K M+P +S ++ AS +EA ++SGSASAL IGGFSV    K    L + PDSN T+I+++GN
Subjt:  VDPPFVGYAKPWLDLDYGNLYCLFFPYSPEHLAHSVPQLKAMRPDISVTIYASSREANQISGSASALFIGGFSVMEMGKSATQLILTPDSNKTVITILGN

Query:  TDVELHWHERDLVIVGPISKEESGIAGRTEYEVKAMGTKRFKDKILITLAANGQRTEIDVFYEPREREAPETTFDATTIWATILGSLSLLILTITLFICF
        TDV++H   +  + +  I +++ GIAG  +Y+V  + +++F D+I+ITL A GQ  EIDV Y+  E     ++ D  ++   IL  + +L++++ + +  
Subjt:  TDVELHWHERDLVIVGPISKEESGIAGRTEYEVKAMGTKRFKDKILITLAANGQRTEIDVFYEPREREAPETTFDATTIWATILGSLSLLILTITLFICF

Query:  MDKPNRAQPSQPSRPAITHTPTVTAPVTPDRRS-PVVSNEQSPRTPQPFVDYVRQTIDETPYYKREGRRRFNVQNT
        +D+    Q    +    T++    A  TP+RRS  V+ +E+SPRTP PF++YV++T+DETPYY+REGRRRFN QNT
Subjt:  MDKPNRAQPSQPSRPAITHTPTVTAPVTPDRRS-PVVSNEQSPRTPQPFVDYVRQTIDETPYYKREGRRRFNVQNT

Arabidopsis top hits

e value

%identity

Alignment

AT5G40480.1 embryo defective 3012

1.3e-86

45.21

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Query:  NDQLSGRWITTNESVVSVDTHSGVAEAVGPGSTEVLFEGSNLNLRTTVTVQNGYTVSVIAPVEILTNVPFPAKGYNFSVNF-SGKDGTLLNDKRVLHDCR
        +++++G+W T+N SV+SV+  SG A+A+  GST V F+G  L L+T VTV  G T+ V +P E LTNV  PA+GY F V F   K     +  +   +C+
Subjt:  NDQLSGRWITTNESVVSVDTHSGVAEAVGPGSTEVLFEGSNLNLRTTVTVQNGYTVSVIAPVEILTNVPFPAKGYNFSVNF-SGKDGTLLNDKRVLHDCR

Query:  VDPPFVGYAKPWLDLDYGNLYCLFFPYSPEHLAHSVPQLKAMRPDISVTIYASSREANQISGSASALFIGGFSVMEMGKSATQLILTPDSNKTVITILGN
        VDPPF+GY KPW+DLD GN YCLFFPYSPEHL HS+   K M+P +S ++ AS +EA ++SGSASAL IGGFSV    K    L + PDSN T+I+++GN
Subjt:  VDPPFVGYAKPWLDLDYGNLYCLFFPYSPEHLAHSVPQLKAMRPDISVTIYASSREANQISGSASALFIGGFSVMEMGKSATQLILTPDSNKTVITILGN

Query:  TDVELHWHERDLVIVGPISKEESGIAGRTEYEVKAMGTKRFKDKILITLAANGQRTEIDVFYEPREREAPETTFDATTIWATILGSLSLLILTITLFICF
        TDV++H   +  + +  I +++ GIAG  +Y+V  + +++F D+I+ITL A GQ  EIDV Y+  E     ++ D  ++   IL  + +L++++ + +  
Subjt:  TDVELHWHERDLVIVGPISKEESGIAGRTEYEVKAMGTKRFKDKILITLAANGQRTEIDVFYEPREREAPETTFDATTIWATILGSLSLLILTITLFICF

Query:  MDKPNRAQPSQPSRPAITHTPTVTAPVTPDRRS-PVVSNEQSPRTPQPFVDYVRQTIDETPYYKREGRRRFNVQNT
        +D+    Q    +    T++    A  TP+RRS  V+ +E+SPRTP PF++YV++T+DETPYY+REGRRRFN QNT
Subjt:  MDKPNRAQPSQPSRPAITHTPTVTAPVTPDRRS-PVVSNEQSPRTPQPFVDYVRQTIDETPYYKREGRRRFNVQNT

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGTGTTGAGGCGCAGCCAGGCGCTCGCCTATAGCGAGAGGCAAGGAGAGGAGAGGCCTTCACGCCTTGCAAGTTTCAATGATCAACTTTCTGGCCGGTGGATTACAAC
CAATGAAAGTGTTGTATCTGTGGATACGCATTCTGGAGTAGCTGAAGCAGTCGGTCCAGGTTCAACAGAAGTACTATTTGAAGGTTCAAATTTGAACTTACGGACTACAG
TGACGGTGCAGAATGGGTACACTGTGTCCGTCATTGCTCCAGTTGAAATTCTGACAAATGTTCCGTTCCCAGCAAAAGGATACAACTTCTCTGTGAATTTCAGTGGCAAA
GATGGAACTCTTCTAAATGATAAGAGAGTCCTGCACGACTGTAGAGTAGACCCTCCCTTTGTTGGATATGCAAAGCCATGGTTGGATCTTGACTATGGCAATTTATATTG
CCTCTTCTTCCCTTACTCACCGGAGCACTTGGCACATTCAGTGCCCCAGCTGAAGGCCATGAGACCAGATATATCTGTTACTATCTATGCTTCATCTCGAGAAGCCAACC
AAATTTCTGGATCTGCTTCTGCACTTTTTATTGGGGGCTTTTCAGTTATGGAGATGGGCAAGAGTGCAACACAATTGATTCTGACTCCAGACTCGAACAAGACTGTTATA
ACCATCTTGGGGAACACAGACGTTGAACTTCATTGGCATGAACGCGATTTGGTGATCGTCGGTCCCATTTCTAAAGAAGAATCTGGCATTGCTGGTCGTACAGAGTATGA
AGTGAAAGCAATGGGAACGAAGAGATTCAAAGATAAAATTCTCATCACATTGGCTGCCAACGGCCAGAGAACAGAAATTGATGTCTTCTATGAACCCAGAGAAAGAGAAG
CACCAGAAACCACCTTCGATGCGACAACCATTTGGGCTACGATACTTGGCTCTCTCTCCTTGCTCATATTGACTATTACTTTATTCATTTGTTTCATGGACAAACCTAAC
AGAGCTCAGCCCTCTCAGCCCTCTCGGCCTGCCATTACTCATACTCCAACTGTTACAGCACCTGTCACGCCTGATCGCAGAAGCCCTGTTGTCTCGAACGAACAATCTCC
TCGAACACCACAACCATTTGTAGACTATGTGAGGCAAACCATTGATGAGACTCCATATTACAAACGTGAGGGAAGACGGAGATTCAATGTGCAAAATACCTTCTAG

mRNA sequence

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Protein sequence

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MVLRRSQALAYSERQGEERPSRLASFNDQLSGRWITTNESVVSVDTHSGVAEAVGPGSTEVLFEGSNLNLRTTVTVQNGYTVSVIAPVEILTNVPFPAKGYNFSVNFSGK
DGTLLNDKRVLHDCRVDPPFVGYAKPWLDLDYGNLYCLFFPYSPEHLAHSVPQLKAMRPDISVTIYASSREANQISGSASALFIGGFSVMEMGKSATQLILTPDSNKTVI
TILGNTDVELHWHERDLVIVGPISKEESGIAGRTEYEVKAMGTKRFKDKILITLAANGQRTEIDVFYEPREREAPETTFDATTIWATILGSLSLLILTITLFICFMDKPN
RAQPSQPSRPAITHTPTVTAPVTPDRRSPVVSNEQSPRTPQPFVDYVRQTIDETPYYKREGRRRFNVQNTF

Spg001822 (gene) of Sponge gourd (cylindrica) v1 genome