; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg001839 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg001839
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionEmb|CAB67623.1
Genome locationscaffold10:460331..461105
RNA-Seq ExpressionSpg001839
SyntenySpg001839
Gene Ontology termsNA
InterPro domainsIPR008480 - Protein of unknown function DUF761, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048544.1 hypothetical protein E6C27_scaffold61G001730 [Cucumis melo var. makuwa]6.8e-2168.32Show/hide
Query:  HQQHHCQLQ----DQAEAEAEAETGV---CEEYEAEAEDLGRKSGGSSVIEMVKNCKEEAGEEFSLEKDIDHVADLFIRNFHRQMRMQKQNSLNRYQQML
        H Q H QLQ    D   AE E ETGV    EE EAEAE         SVIEMVKN KE+AGEEFSLEKDIDHVADLFIRNFHRQMRMQKQNSLNR  Q L
Subjt:  HQQHHCQLQ----DQAEAEAEAETGV---CEEYEAEAEDLGRKSGGSSVIEMVKNCKEEAGEEFSLEKDIDHVADLFIRNFHRQMRMQKQNSLNRYQQML

Query:  V
        +
Subjt:  V

KAG6588850.1 hypothetical protein SDJN03_17415, partial [Cucurbita argyrosperma subsp. sororia]1.4e-1854.69Show/hide
Query:  SDVTHQQHHCQLQ-------------------------------DQAEAEAEAETGVCEEYEAEAEDLGRKSGGSSVIEMVKNCKEEAGEEFSLEKDIDH
        S VTHQQ+ CQ+Q                               ++  AE  AETG   E E EA  +GR + G SVIEMVKN KEEAGEEFSLEKDID 
Subjt:  SDVTHQQHHCQLQ-------------------------------DQAEAEAEAETGVCEEYEAEAEDLGRKSGGSSVIEMVKNCKEEAGEEFSLEKDIDH

Query:  VADLFIRNFHRQMRMQKQNSLNRYQQML
        VADLFIRNFH QMRMQKQNSLNRY +ML
Subjt:  VADLFIRNFHRQMRMQKQNSLNRYQQML

XP_008450196.1 PREDICTED: uncharacterized protein LOC103491856 [Cucumis melo]8.9e-2170.71Show/hide
Query:  HQQHHCQLQ----DQAEAEAEAETGVCEEY-EAEAEDLGRKSGGSSVIEMVKNCKEEAGEEFSLEKDIDHVADLFIRNFHRQMRMQKQNSLNRYQQMLV
        H Q H QLQ    D   AE E ETGV  +Y EAEAE     SG  SVIEMVKN KE+AGEEFSLEKDIDHVADLFIRNFHRQMRMQKQNSLNR  Q L+
Subjt:  HQQHHCQLQ----DQAEAEAEAETGVCEEY-EAEAEDLGRKSGGSSVIEMVKNCKEEAGEEFSLEKDIDHVADLFIRNFHRQMRMQKQNSLNRYQQMLV

XP_011651332.1 uncharacterized protein LOC105434868 [Cucumis sativus]3.4e-2063.73Show/hide
Query:  HQQHHCQLQ--------DQAEAEAEAETGVCEEYEAEAEDLGRKSGGSSVIEMVKNCKEEAGEEFSLEKDIDHVADLFIRNFHRQMRMQKQNSLNRYQQM
        H Q H QLQ         + + E E ETGVC +YE EAE         SVIEMVKN KE+AGEEFSLEKDIDHVADLFIRNFH+QMRMQKQNSLNR  Q 
Subjt:  HQQHHCQLQ--------DQAEAEAEAETGVCEEYEAEAEDLGRKSGGSSVIEMVKNCKEEAGEEFSLEKDIDHVADLFIRNFHRQMRMQKQNSLNRYQQM

Query:  LV
        L+
Subjt:  LV

XP_038904099.1 uncharacterized protein LOC120090474 [Benincasa hispida]2.3e-2165.71Show/hide
Query:  HQQHHCQL---QDQAEAEAEAETGVCEEYE--------AEAEDLGRKSGGSSVIEMVKNCKEEAGEEFSLEKDIDHVADLFIRNFHRQMRMQKQNSLNRY
        HQQ H QL   QDQ  AE E ETGVC++YE        AEAE         SVIEMVK+ KE+AGEEFSLEKDIDHVADLFIRNFH+QMRMQKQNSLNR 
Subjt:  HQQHHCQL---QDQAEAEAEAETGVCEEYE--------AEAEDLGRKSGGSSVIEMVKNCKEEAGEEFSLEKDIDHVADLFIRNFHRQMRMQKQNSLNRY

Query:  QQMLV
         Q L+
Subjt:  QQMLV

TrEMBL top hitse value%identityAlignment
A0A0A0LCA7 Uncharacterized protein1.6e-2063.73Show/hide
Query:  HQQHHCQLQ--------DQAEAEAEAETGVCEEYEAEAEDLGRKSGGSSVIEMVKNCKEEAGEEFSLEKDIDHVADLFIRNFHRQMRMQKQNSLNRYQQM
        H Q H QLQ         + + E E ETGVC +YE EAE         SVIEMVKN KE+AGEEFSLEKDIDHVADLFIRNFH+QMRMQKQNSLNR  Q 
Subjt:  HQQHHCQLQ--------DQAEAEAEAETGVCEEYEAEAEDLGRKSGGSSVIEMVKNCKEEAGEEFSLEKDIDHVADLFIRNFHRQMRMQKQNSLNRYQQM

Query:  LV
        L+
Subjt:  LV

A0A1S3BPP6 uncharacterized protein LOC1034918564.3e-2170.71Show/hide
Query:  HQQHHCQLQ----DQAEAEAEAETGVCEEY-EAEAEDLGRKSGGSSVIEMVKNCKEEAGEEFSLEKDIDHVADLFIRNFHRQMRMQKQNSLNRYQQMLV
        H Q H QLQ    D   AE E ETGV  +Y EAEAE     SG  SVIEMVKN KE+AGEEFSLEKDIDHVADLFIRNFHRQMRMQKQNSLNR  Q L+
Subjt:  HQQHHCQLQ----DQAEAEAEAETGVCEEY-EAEAEDLGRKSGGSSVIEMVKNCKEEAGEEFSLEKDIDHVADLFIRNFHRQMRMQKQNSLNRYQQMLV

A0A5A7TZT4 Uncharacterized protein3.3e-2168.32Show/hide
Query:  HQQHHCQLQ----DQAEAEAEAETGV---CEEYEAEAEDLGRKSGGSSVIEMVKNCKEEAGEEFSLEKDIDHVADLFIRNFHRQMRMQKQNSLNRYQQML
        H Q H QLQ    D   AE E ETGV    EE EAEAE         SVIEMVKN KE+AGEEFSLEKDIDHVADLFIRNFHRQMRMQKQNSLNR  Q L
Subjt:  HQQHHCQLQ----DQAEAEAEAETGV---CEEYEAEAEDLGRKSGGSSVIEMVKNCKEEAGEEFSLEKDIDHVADLFIRNFHRQMRMQKQNSLNRYQQML

Query:  V
        +
Subjt:  V

A0A6J1EKV0 uncharacterized protein LOC1114352501.5e-1854.1Show/hide
Query:  SDVTHQQHHCQLQDQAEAEAEAETGVCEE-------------------------YEAEAEDLGRKSGGSSVIEMVKNCKEEAGEEFSLEKDIDHVADLFI
        S VTHQQ+ CQ+Q     +A+   GV EE                          E E E    ++ G SVIEMVKN KEEAGEEFSLEKDID VADLFI
Subjt:  SDVTHQQHHCQLQDQAEAEAEAETGVCEE-------------------------YEAEAEDLGRKSGGSSVIEMVKNCKEEAGEEFSLEKDIDHVADLFI

Query:  RNFHRQMRMQKQNSLNRYQQML
        RNFH QMRMQKQNSLNRY +ML
Subjt:  RNFHRQMRMQKQNSLNRYQQML

A0A6J1JR68 uncharacterized protein LOC1114867274.5e-1853.17Show/hide
Query:  SDVTHQQHHCQLQDQAEAEAEAETGVCEEYEA--------------EAEDLGRKSG---------------GSSVIEMVKNCKEEAGEEFSLEKDIDHVA
        S V HQQ+ CQ+Q     EA+   GV EE                   E+ G K+G               G SVIEMVKN KEEAGEEFSLEKDID VA
Subjt:  SDVTHQQHHCQLQDQAEAEAEAETGVCEEYEA--------------EAEDLGRKSG---------------GSSVIEMVKNCKEEAGEEFSLEKDIDHVA

Query:  DLFIRNFHRQMRMQKQNSLNRYQQML
        DLFIRNFH QMRMQKQNSLNRY +ML
Subjt:  DLFIRNFHRQMRMQKQNSLNRYQQML

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G13880.1 unknown protein1.3e-0946Show/hide
Query:  IIEEHDVCAESDVTHQQHHCQLQDQAEAEAEAETGVCEEYEAEAEDLGRKSGGSSVIEMVKNCKEEAGEEFSLEKDIDHVADLFIRNFHRQMRMQKQNSL
        ++   +V A S      H   +Q Q   E + E G  E+Y      L    G  SVIEMVK+ KE+ GEEF LE +ID VADLFI  FHRQM +QKQ SL
Subjt:  IIEEHDVCAESDVTHQQHHCQLQDQAEAEAEAETGVCEEYEAEAEDLGRKSGGSSVIEMVKNCKEEAGEEFSLEKDIDHVADLFIRNFHRQMRMQKQNSL

AT5G47920.1 unknown protein2.0e-1557.53Show/hide
Query:  EYEAEAEDLGRKSGGSSVIEMVKNCKEEAGEEFSLEKDIDHVADLFIRNFHRQMRMQKQNSLNRYQQMLVDGT
        E E +  DL  +  GSSVI+MV+  KEE GE F LE +IDHVADLFI  FH+QM++QK  S  RYQ+ML  GT
Subjt:  EYEAEAEDLGRKSGGSSVIEMVKNCKEEAGEEFSLEKDIDHVADLFIRNFHRQMRMQKQNSLNRYQQMLVDGT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGTCTTTTTGCTTTGTTCGGGGCGGGAAATGGGCATGAAAATGATTCCCATTGATGGACGTTTCATTGAACATGAAGAAGGAATCATTGAAGAACATGATGTGTG
CGCTGAGAGCGATGTCACCCATCAACAGCATCACTGCCAACTACAAGATCAAGCAGAAGCAGAAGCAGAAGCAGAAACAGGGGTTTGCGAGGAGTACGAAGCAGAAGCAG
AAGATTTGGGAAGAAAAAGTGGTGGGTCGTCGGTGATTGAGATGGTGAAGAATTGCAAGGAAGAAGCAGGGGAAGAGTTCAGCCTTGAGAAGGACATCGACCATGTTGCT
GATTTGTTCATAAGGAATTTCCATCGGCAGATGAGGATGCAGAAGCAGAATTCTCTCAACAGATACCAACAAATGCTTGTTGATGGAACCCTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGTCTTTTTGCTTTGTTCGGGGCGGGAAATGGGCATGAAAATGATTCCCATTGATGGACGTTTCATTGAACATGAAGAAGGAATCATTGAAGAACATGATGTGTG
CGCTGAGAGCGATGTCACCCATCAACAGCATCACTGCCAACTACAAGATCAAGCAGAAGCAGAAGCAGAAGCAGAAACAGGGGTTTGCGAGGAGTACGAAGCAGAAGCAG
AAGATTTGGGAAGAAAAAGTGGTGGGTCGTCGGTGATTGAGATGGTGAAGAATTGCAAGGAAGAAGCAGGGGAAGAGTTCAGCCTTGAGAAGGACATCGACCATGTTGCT
GATTTGTTCATAAGGAATTTCCATCGGCAGATGAGGATGCAGAAGCAGAATTCTCTCAACAGATACCAACAAATGCTTGTTGATGGAACCCTCTGA
Protein sequenceShow/hide protein sequence
MLVFLLCSGREMGMKMIPIDGRFIEHEEGIIEEHDVCAESDVTHQQHHCQLQDQAEAEAEAETGVCEEYEAEAEDLGRKSGGSSVIEMVKNCKEEAGEEFSLEKDIDHVA
DLFIRNFHRQMRMQKQNSLNRYQQMLVDGTL