; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg001916 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg001916
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionheterogeneous nuclear ribonucleoprotein 1
Genome locationscaffold10:2276851..2287655
RNA-Seq ExpressionSpg001916
SyntenySpg001916
Gene Ontology termsGO:0006378 - mRNA polyadenylation (biological process)
GO:0010468 - regulation of gene expression (biological process)
GO:0048576 - positive regulation of short-day photoperiodism, flowering (biological process)
GO:0048578 - positive regulation of long-day photoperiodism, flowering (biological process)
GO:0005654 - nucleoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003730 - mRNA 3'-UTR binding (molecular function)
GO:0097157 - pre-mRNA intronic binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581052.1 Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp. sororia]3.4e-18388.24Show/hide
Query:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPSHADGASAGKIFVGGLPRETTSGWFFFLRLYVSYA--------VDRKTGHPRGFGFVTYADHS
        MSENSMDSK NDAATNGEH+DAKPLNHKDDGSRHDPPSH DGASAGKIFVGGLPRETTS    F++ +  Y          DRKTGHPRGFGFVTYAD S
Subjt:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPSHADGASAGKIFVGGLPRETTSGWFFFLRLYVSYA--------VDRKTGHPRGFGFVTYADHS

Query:  VVDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRL
        VVDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRL
Subjt:  VVDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRL

Query:  ELAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDSYGEFGGGGYGGGFRAGGPYSARGGSYGGYGGNDFSGYGMYGAGGIGAYREDPSMGYSAR
        ELAGSQVEIKKAEPKKANPPP PSKRYHDSRPSYSG YGD+YGEFGGGGYGGGFRAGGPY ARGG YGGYGGNDFSGYGMYG GGIGAYREDPSMGYSAR
Subjt:  ELAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDSYGEFGGGGYGGGFRAGGPYSARGGSYGGYGGNDFSGYGMYGAGGIGAYREDPSMGYSAR

Query:  YGAGFSRGYDFRGGYGGPDESYGAYNSGGAPNAGGYAGSYDMGMGTGYPAGGRGSFYGSR----------GAGGYDGAGSAPSGRYHPYGR
        YGAGFSRGYDFRGGYGGPDESYGAYNS  APN GGYAGSYDMG+GTGYP+GGRGSFYGSR          G GGYDGAGSAPSGRYHPYGR
Subjt:  YGAGFSRGYDFRGGYGGPDESYGAYNSGGAPNAGGYAGSYDMGMGTGYPAGGRGSFYGSR----------GAGGYDGAGSAPSGRYHPYGR

KAG7017783.1 Nuclear pore complex protein, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-18585.99Show/hide
Query:  GLAISLVHLSSPPSSLQAPLFPLMSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPSHADGASAGKIFVGGLPRETTSGWFFFLRLYVSYA-----
        GLA SLV LS P   L +   PLMSENSMDSK NDAATNGEH+DAKPLNHKDDGSRHDPPSH DGASAGKIFVGGLPRETTS    F++ +  Y      
Subjt:  GLAISLVHLSSPPSSLQAPLFPLMSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPSHADGASAGKIFVGGLPRETTSGWFFFLRLYVSYA-----

Query:  ---VDRKTGHPRGFGFVTYADHSVVDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSR
            DRKTGHPRGFGFVTYAD SVVDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSR
Subjt:  ---VDRKTGHPRGFGFVTYADHSVVDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSR

Query:  GFGFITFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDSYGEFGGGGYGGGFRAGGPYSARGGSYGGYGGNDFSG
        GFGFITFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPP PSKRYHDSRPSYSG YGD+YGEFGGGGYGGGFRAGGPY ARGG YGGYGGNDFSG
Subjt:  GFGFITFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDSYGEFGGGGYGGGFRAGGPYSARGGSYGGYGGNDFSG

Query:  YGMYGAGGIGAYREDPSMGYSARYGAGFSRGYDFRGGYGGPDESYGAYNSGGAPNAGGYAGSYDMGMGTGYPAGGRGSFYGSR----------GAGGYDG
        YGMYG GGIGAYREDPSMGY+ARYGAGFSRGYDFRGGYGGPDESYGAYNS  APN GGYAGSYDMG+GTGYP+GGRGSFYGSR          G GGYDG
Subjt:  YGMYGAGGIGAYREDPSMGYSARYGAGFSRGYDFRGGYGGPDESYGAYNSGGAPNAGGYAGSYDMGMGTGYPAGGRGSFYGSR----------GAGGYDG

Query:  AGSAPSGRYHPYGR
        AGSAPSGRYHPYGR
Subjt:  AGSAPSGRYHPYGR

XP_022934343.1 heterogeneous nuclear ribonucleoprotein 1 [Cucurbita moschata]4.4e-18388.01Show/hide
Query:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPSHADGASAGKIFVGGLPRETTSGWFFFLRLYVSYA--------VDRKTGHPRGFGFVTYADHS
        MSENSMDSK NDAATNGEH+DAKPLNHKDDGSRHDPPSH DGASAGKIFVGGLPRETTS    F++ +  Y          DRKTGHPRGFGFVTYAD S
Subjt:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPSHADGASAGKIFVGGLPRETTSGWFFFLRLYVSYA--------VDRKTGHPRGFGFVTYADHS

Query:  VVDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRL
        VVDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRL
Subjt:  VVDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRL

Query:  ELAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDSYGEFGGGGYGGGFRAGGPYSARGGSYGGYGGNDFSGYGMYGAGGIGAYREDPSMGYSAR
        ELAGSQVEIKKAEPKKANPPP PSKRYHDSRPSYSG YGD+YGEFGGGGYGGGFRAGGPY ARGG YGGYGGNDFSGYGMYG GGIGAYREDPSMGYSAR
Subjt:  ELAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDSYGEFGGGGYGGGFRAGGPYSARGGSYGGYGGNDFSGYGMYGAGGIGAYREDPSMGYSAR

Query:  YGAGFSRGYDFRGGYGGPDESYGAYNSGGAPNAGGYAGSYDMGMGTGYPAGGRGSFYGSR-----------GAGGYDGAGSAPSGRYHPYGR
        YGAGFSRGYDFRGGYGGPDESYGAYNS  APN GGYAGSYDMG+GTGYP+GGRGSFYGSR           G GGYDGAGSAPSGRYHPYGR
Subjt:  YGAGFSRGYDFRGGYGGPDESYGAYNSGGAPNAGGYAGSYDMGMGTGYPAGGRGSFYGSR-----------GAGGYDGAGSAPSGRYHPYGR

XP_022982535.1 heterogeneous nuclear ribonucleoprotein 1 [Cucurbita maxima]5.7e-18388.21Show/hide
Query:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPSHADGASAGKIFVGGLPRETTSGWFFFLRLYVSYA--------VDRKTGHPRGFGFVTYADHS
        MSENSMDSK NDAATNGEH+DAKPLNHKDDGSRHDPPSH DGASAGKIFVGGLPRETTS    F++ +  Y          DRKTGHPRGFGFVTYAD S
Subjt:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPSHADGASAGKIFVGGLPRETTSGWFFFLRLYVSYA--------VDRKTGHPRGFGFVTYADHS

Query:  VVDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRL
        VVDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRL
Subjt:  VVDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRL

Query:  ELAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDSYGEFGGGGYGGGFRAGGPYSARGGSYGGYGGNDFSGYGMYGAGGIGAYREDPSMGYSAR
        ELAGSQVEIKKAEPKK+NPPP PSKRYHDSRPSYSG YGD+YGEFGGGGYGGGFRAGGPY ARGG YGGYGGNDFSGYGMYG GGIGAYREDPSMGYSAR
Subjt:  ELAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDSYGEFGGGGYGGGFRAGGPYSARGGSYGGYGGNDFSGYGMYGAGGIGAYREDPSMGYSAR

Query:  YGAGFSRGYDFRGGYGGPDESYGAYNSGGAPNAGGYAGSYDMGMGTGYPAGGRGSFYGSR---------GAGGYDGAGSAPSGRYHPYGR
        YGAGFSRGYDFRGGYGGPDESYGAYNS  APN GGYAGSYDMG+GTGYP+GGRGSFYGSR         G GGYDGAGSAPSGRYHPYGR
Subjt:  YGAGFSRGYDFRGGYGGPDESYGAYNSGGAPNAGGYAGSYDMGMGTGYPAGGRGSFYGSR---------GAGGYDGAGSAPSGRYHPYGR

XP_023528997.1 LOW QUALITY PROTEIN: nuclear pore complex protein GP210 [Cucurbita pepo subsp. pepo]1.8e-18488.52Show/hide
Query:  PLMSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPSHADGASAGKIFVGGLPRETTSGWFFFLRLYVSYA--------VDRKTGHPRGFGFVTYAD
        PLMSENSMDSK NDAATNGEH+DAKPLNHKDDGSRHDPPSH DGASAGKIFVGGLPRETTS    F++ +  Y          DRKTGHPRGFGFVTYAD
Subjt:  PLMSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPSHADGASAGKIFVGGLPRETTSGWFFFLRLYVSYA--------VDRKTGHPRGFGFVTYAD

Query:  HSVVDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGN
         SVVDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGN
Subjt:  HSVVDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGN

Query:  RLELAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDSYGEFGGGGYGGGFRAGGPYSARGGSYGGYGGNDFSGYGMYGAGGIGAYREDPSMGYS
        RLELAGSQVEIKKAEPKKANPPP PSKRYHDSRPSYSG YGD+YGEFGGGGYGGGFRAGGPY ARGG YGGYGGNDFSGYGMYG GGIGAYREDPSMGYS
Subjt:  RLELAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDSYGEFGGGGYGGGFRAGGPYSARGGSYGGYGGNDFSGYGMYGAGGIGAYREDPSMGYS

Query:  ARYGAGFSRGYDFRGGYGGPDESYGAYNSGGAPNAGGYAGSYDMGMGTGYPAGGRGSFYGSR---------GAGGYDGAGSAPSGRYHPYGR
        ARYGAGFSRGYDFRGGYGGPDESYGAYNS  APN GGYAGSYDMG+GTGYP+GGRGSFYGSR         G GGYDGAGSAPSGRYHPYGR
Subjt:  ARYGAGFSRGYDFRGGYGGPDESYGAYNSGGAPNAGGYAGSYDMGMGTGYPAGGRGSFYGSR---------GAGGYDGAGSAPSGRYHPYGR

TrEMBL top hitse value%identityAlignment
A0A0A0LG75 Uncharacterized protein4.7e-18388.83Show/hide
Query:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPSHADGASAGKIFVGGLPRETTSGWFFFLRLYVSYA--------VDRKTGHPRGFGFVTYADHS
        MSENSMDSKPND ATNGEH+DAKPLNHKDDGSRHDPPSH DGASAGKIFVGGLPRETTS    F++ +  Y          DRKTGHPRGFGFVTYAD S
Subjt:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPSHADGASAGKIFVGGLPRETTSGWFFFLRLYVSYA--------VDRKTGHPRGFGFVTYADHS

Query:  VVDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRL
        VVDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYG VKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRL
Subjt:  VVDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRL

Query:  ELAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDSYGEFGGGGYGGGFRAGGPYSARGGSYGGYGGNDFSGYGMYGAGGIGAYREDPSMGYSAR
        E+AGSQVEIKKAEPKKANPPPAPSKR+HDSRPSYSG YGD+YGEFGGGGYGG FRAGGPY ARGG YGGYGGNDFSGYGMYG GG+GAYREDPSMGYSAR
Subjt:  ELAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDSYGEFGGGGYGGGFRAGGPYSARGGSYGGYGGNDFSGYGMYGAGGIGAYREDPSMGYSAR

Query:  YGAGFSRGYDFRGGYGGPDESYGAYNSGGAPNAGGYAGSYDMGMGTGYPAGGRGSFYGSR----GAGGYDGAGSAPSGRYHPYGR
        YGA FSRGYDFRGGYGGPDESYGAYNSGGAP+ GGYAGSYDMGMGTGY AGGRGSFYGSR    G GGYDGAGSAPSGRYHPYGR
Subjt:  YGAGFSRGYDFRGGYGGPDESYGAYNSGGAPNAGGYAGSYDMGMGTGYPAGGRGSFYGSR----GAGGYDGAGSAPSGRYHPYGR

A0A1S4E4Y8 heterogeneous nuclear ribonucleoprotein 11.3e-18089.3Show/hide
Query:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPSHADGASAGKIFVGGLPRETTSGWFFFLRLYVSYA--------VDRKTGHPRGFGFVTYADHS
        MSENSMDSKPND ATNGEHDDAKPLNHKDDGSRHDPP H DGASAGKIFVGGLPRETTS    F++ +  Y          DRKTGHPRGFGFVTYAD S
Subjt:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPSHADGASAGKIFVGGLPRETTSGWFFFLRLYVSYA--------VDRKTGHPRGFGFVTYADHS

Query:  VVDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRL
        VVDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYG VKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRL
Subjt:  VVDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRL

Query:  ELAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGY-GDSYGEFGGGGYGGGFRAGGPYSARGGSYGGYGGNDFSGYGMYGAGGIGAYREDPSMGYSA
        E+AGSQVEIKKAEPKKANPPPAPSKRYH+SRPSYSG Y GD+YGEFGGGGYGG FRAGGPY ARGG YGGYGGNDFSGYGMYG GG+GAYREDPSMGYSA
Subjt:  ELAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGY-GDSYGEFGGGGYGGGFRAGGPYSARGGSYGGYGGNDFSGYGMYGAGGIGAYREDPSMGYSA

Query:  RYGAGFSRGYDFRGGYGGPDESYGAYNSGGAPNAGGYAGSYDMGMGTGYPAGGRGSFYGSR-GAGGYDGAGSAPSGRYHPYGR
        RYGA FSRGYDFRGGYGGPDESYGAYNSGGAPN GGYA SYDMGMGTGY AGGRGSFYGSR G GGYDGAGSAPSGRYHPYGR
Subjt:  RYGAGFSRGYDFRGGYGGPDESYGAYNSGGAPNAGGYAGSYDMGMGTGYPAGGRGSFYGSR-GAGGYDGAGSAPSGRYHPYGR

A0A5D3D587 Heterogeneous nuclear ribonucleoprotein 11.3e-18089.3Show/hide
Query:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPSHADGASAGKIFVGGLPRETTSGWFFFLRLYVSYA--------VDRKTGHPRGFGFVTYADHS
        MSENSMDSKPND ATNGEHDDAKPLNHKDDGSRHDPP H DGASAGKIFVGGLPRETTS    F++ +  Y          DRKTGHPRGFGFVTYAD S
Subjt:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPSHADGASAGKIFVGGLPRETTSGWFFFLRLYVSYA--------VDRKTGHPRGFGFVTYADHS

Query:  VVDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRL
        VVDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYG VKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRL
Subjt:  VVDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRL

Query:  ELAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGY-GDSYGEFGGGGYGGGFRAGGPYSARGGSYGGYGGNDFSGYGMYGAGGIGAYREDPSMGYSA
        E+AGSQVEIKKAEPKKANPPPAPSKRYH+SRPSYSG Y GD+YGEFGGGGYGG FRAGGPY ARGG YGGYGGNDFSGYGMYG GG+GAYREDPSMGYSA
Subjt:  ELAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGY-GDSYGEFGGGGYGGGFRAGGPYSARGGSYGGYGGNDFSGYGMYGAGGIGAYREDPSMGYSA

Query:  RYGAGFSRGYDFRGGYGGPDESYGAYNSGGAPNAGGYAGSYDMGMGTGYPAGGRGSFYGSR-GAGGYDGAGSAPSGRYHPYGR
        RYGA FSRGYDFRGGYGGPDESYGAYNSGGAPN GGYA SYDMGMGTGY AGGRGSFYGSR G GGYDGAGSAPSGRYHPYGR
Subjt:  RYGAGFSRGYDFRGGYGGPDESYGAYNSGGAPNAGGYAGSYDMGMGTGYPAGGRGSFYGSR-GAGGYDGAGSAPSGRYHPYGR

A0A6J1F7E2 heterogeneous nuclear ribonucleoprotein 12.1e-18388.01Show/hide
Query:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPSHADGASAGKIFVGGLPRETTSGWFFFLRLYVSYA--------VDRKTGHPRGFGFVTYADHS
        MSENSMDSK NDAATNGEH+DAKPLNHKDDGSRHDPPSH DGASAGKIFVGGLPRETTS    F++ +  Y          DRKTGHPRGFGFVTYAD S
Subjt:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPSHADGASAGKIFVGGLPRETTSGWFFFLRLYVSYA--------VDRKTGHPRGFGFVTYADHS

Query:  VVDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRL
        VVDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRL
Subjt:  VVDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRL

Query:  ELAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDSYGEFGGGGYGGGFRAGGPYSARGGSYGGYGGNDFSGYGMYGAGGIGAYREDPSMGYSAR
        ELAGSQVEIKKAEPKKANPPP PSKRYHDSRPSYSG YGD+YGEFGGGGYGGGFRAGGPY ARGG YGGYGGNDFSGYGMYG GGIGAYREDPSMGYSAR
Subjt:  ELAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDSYGEFGGGGYGGGFRAGGPYSARGGSYGGYGGNDFSGYGMYGAGGIGAYREDPSMGYSAR

Query:  YGAGFSRGYDFRGGYGGPDESYGAYNSGGAPNAGGYAGSYDMGMGTGYPAGGRGSFYGSR-----------GAGGYDGAGSAPSGRYHPYGR
        YGAGFSRGYDFRGGYGGPDESYGAYNS  APN GGYAGSYDMG+GTGYP+GGRGSFYGSR           G GGYDGAGSAPSGRYHPYGR
Subjt:  YGAGFSRGYDFRGGYGGPDESYGAYNSGGAPNAGGYAGSYDMGMGTGYPAGGRGSFYGSR-----------GAGGYDGAGSAPSGRYHPYGR

A0A6J1J2Y6 heterogeneous nuclear ribonucleoprotein 12.8e-18388.21Show/hide
Query:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPSHADGASAGKIFVGGLPRETTSGWFFFLRLYVSYA--------VDRKTGHPRGFGFVTYADHS
        MSENSMDSK NDAATNGEH+DAKPLNHKDDGSRHDPPSH DGASAGKIFVGGLPRETTS    F++ +  Y          DRKTGHPRGFGFVTYAD S
Subjt:  MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPSHADGASAGKIFVGGLPRETTSGWFFFLRLYVSYA--------VDRKTGHPRGFGFVTYADHS

Query:  VVDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRL
        VVDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRL
Subjt:  VVDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRL

Query:  ELAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDSYGEFGGGGYGGGFRAGGPYSARGGSYGGYGGNDFSGYGMYGAGGIGAYREDPSMGYSAR
        ELAGSQVEIKKAEPKK+NPPP PSKRYHDSRPSYSG YGD+YGEFGGGGYGGGFRAGGPY ARGG YGGYGGNDFSGYGMYG GGIGAYREDPSMGYSAR
Subjt:  ELAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDSYGEFGGGGYGGGFRAGGPYSARGGSYGGYGGNDFSGYGMYGAGGIGAYREDPSMGYSAR

Query:  YGAGFSRGYDFRGGYGGPDESYGAYNSGGAPNAGGYAGSYDMGMGTGYPAGGRGSFYGSR---------GAGGYDGAGSAPSGRYHPYGR
        YGAGFSRGYDFRGGYGGPDESYGAYNS  APN GGYAGSYDMG+GTGYP+GGRGSFYGSR         G GGYDGAGSAPSGRYHPYGR
Subjt:  YGAGFSRGYDFRGGYGGPDESYGAYNSGGAPNAGGYAGSYDMGMGTGYPAGGRGSFYGSR---------GAGGYDGAGSAPSGRYHPYGR

SwissProt top hitse value%identityAlignment
P09651 Heterogeneous nuclear ribonucleoprotein A18.1e-2335.29Show/hide
Query:  KIFVGGLPRETT--------SGWFFFLRLYVSYAVDRKTGHPRGFGFVTYADHSVVDKVIE-DTHIINGKQVEIKRTIPKGSSS--SRDFKTKKIFVGGI
        K+F+GGL  ETT          W       V    D  T   RGFGFVTYA    VD  +    H ++G+ VE KR + +  S         KKIFVGGI
Subjt:  KIFVGGLPRETT--------SGWFFFLRLYVSYAVDRKTGHPRGFGFVTYADHSVVDKVIE-DTHIINGKQVEIKRTIPKGSSS--SRDFKTKKIFVGGI

Query:  PTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDSYG
            +E   RD+F QYG+++  +IM D  + + RGF F+TF+   +VD ++       + G   E++KA  K+     + S+R      ++ GG G  +G
Subjt:  PTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDSYG

Query:  EFGGGGYGGGFRAGGPY--SARGGSYGGYGG--NDFSGYGMYGAGGIGAYREDPSMGYSARYGAGFSRGYDFRG-GYGGPDESYGAYNSGGAPNAGGYAG
             G GG F   G +  S  GG YGG G   N F   G YG GG G        G S  YG+G  +GY  +G GYGG   SY +YN+GG    GG +G
Subjt:  EFGGGGYGGGFRAGGPY--SARGGSYGGYGG--NDFSGYGMYGAGGIGAYREDPSMGYSARYGAGFSRGYDFRG-GYGGPDESYGAYNSGGAPNAGGYAG

Query:  SYDMGMGTGYPAGG----RGSFYGSRGAGGYDGAGSAPSG
        S + G G  Y   G    + S +G    G + G  S P G
Subjt:  SYDMGMGTGYPAGG----RGSFYGSRGAGGYDGAGSAPSG

Q08473 RNA-binding protein squid1.9e-2434.15Show/hide
Query:  ATNGEHDDAKPLNHKDDGSRHDPPSHADGASAGKIFVGGLPRETTS-------GWFFFLRLYVSYAVDRKTGHPRGFGFVTYADHSVVDKV-IEDTHIIN
        +TNG  D+    + + D  R             K+FVGGL  ETT        G +  +   ++   D +TG  RGF F+ + +   +DKV   D HIIN
Subjt:  ATNGEHDDAKPLNHKDDGSRHDPPSHADGASAGKIFVGGLPRETTS-------GWFFFLRLYVSYAVDRKTGHPRGFGFVTYADHSVVDKV-IEDTHIIN

Query:  GKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLELAGSQVEIKKAE
         K+V+ K+   +           KIFVGG+ T + ++E + +F Q+G + E ++  D   S+ +GF FITF++EQ V DLL    + ++AG +V++K+A 
Subjt:  GKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLELAGSQVEIKKAE

Query:  PKKANPPPAPSKRYHDSRPSYSGGYGDSYGEFGGGGYGGGFRAGGPYSARGGSYGGYGGNDFSGYGMYGAGGIGAYREDPSMGYSARYGAGFSRGYDFRG
        PK  N      +          G  G   G  G GGYGG       +  + GSYGGYGG    GYG YGAGG G Y           Y  G+  GYD+  
Subjt:  PKKANPPPAPSKRYHDSRPSYSGGYGDSYGEFGGGGYGGGFRAGGPYSARGGSYGGYGGNDFSGYGMYGAGGIGAYREDPSMGYSARYGAGFSRGYDFRG

Query:  GYGGPDESYGAYNSGGAPNAGGYAGSYDMGMGTGYPAGGRGSFYGSRGAGGYDGAGSAPSGRYHPY
        GY G    YG Y  G   N  G  G  +MG G G P GG G   G    GG    G     R+ PY
Subjt:  GYGGPDESYGAYNSGGAPNAGGYAGSYDMGMGTGYPAGGRGSFYGSRGAGGYDGAGSAPSGRYHPY

Q6URK4 Heterogeneous nuclear ribonucleoprotein A32.4e-2236.08Show/hide
Query:  HDPPSHADGASAGKIFVGGLPRETTSG--------WFFFLRLYVSYAVDRKTGHPRGFGFVTYADHSVVDKVI-EDTHIINGKQVEIKRTIPKGSS--SS
        HDP    +     K+F+GGL  ETT          W       V    D +T   RGFGFVTY+    VD  +    H ++G+ VE KR + +  S    
Subjt:  HDPPSHADGASAGKIFVGGLPRETTSG--------WFFFLRLYVSYAVDRKTGHPRGFGFVTYADHSVVDKVI-EDTHIINGKQVEIKRTIPKGSS--SS

Query:  RDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPPAPSKRYHDS
             KKIFVGGI    +E   RD+F +YG+++  ++M D  + + RGF F+TF+    VD ++       + G   E+KKA  K+     A S+R    
Subjt:  RDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPPAPSKRYHDS

Query:  RPSYSGGYGDSYGEFGGGGYGGGFRAGGPYSARGGSYGGYGGNDFSGYGMYGAGGIGAYREDPSMGYSARYGAGFSRGYDFRGGYGGPDESYGAYNSGGA
        R   SG +    G FGGG  GG F  GG +  RGG YGG GG     YG    GG G Y  +   G    YG G   GY  RGGYGG    YG  N GG 
Subjt:  RPSYSGGYGDSYGEFGGGGYGGGFRAGGPYSARGGSYGGYGGNDFSGYGMYGAGGIGAYREDPSMGYSARYGAGFSRGYDFRGGYGGPDESYGAYNSGGA

Query:  PNAGGYAGSYDMGMGTGYPAGGR--GSFYGSRGAGGYDGAGSAPSGRYHPYG
           GG  G YD     GY  GG   G  YG  G G Y+  G+    +   YG
Subjt:  PNAGGYAGSYDMGMGTGYPAGGR--GSFYGSRGAGGYDGAGSAPSGRYHPYG

Q8BG05 Heterogeneous nuclear ribonucleoprotein A32.4e-2236.08Show/hide
Query:  HDPPSHADGASAGKIFVGGLPRETTSG--------WFFFLRLYVSYAVDRKTGHPRGFGFVTYADHSVVDKVI-EDTHIINGKQVEIKRTIPKGSS--SS
        HDP    +     K+F+GGL  ETT          W       V    D +T   RGFGFVTY+    VD  +    H ++G+ VE KR + +  S    
Subjt:  HDPPSHADGASAGKIFVGGLPRETTSG--------WFFFLRLYVSYAVDRKTGHPRGFGFVTYADHSVVDKVI-EDTHIINGKQVEIKRTIPKGSS--SS

Query:  RDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPPAPSKRYHDS
             KKIFVGGI    +E   RD+F +YG+++  ++M D  + + RGF F+TF+    VD ++       + G   E+KKA  K+     A S+R    
Subjt:  RDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPPAPSKRYHDS

Query:  RPSYSGGYGDSYGEFGGGGYGGGFRAGGPYSARGGSYGGYGGNDFSGYGMYGAGGIGAYREDPSMGYSARYGAGFSRGYDFRGGYGGPDESYGAYNSGGA
        R   SG +    G FGGG  GG F  GG +  RGG YGG GG     YG    GG G Y  +   G    YG G   GY  RGGYGG    YG  N GG 
Subjt:  RPSYSGGYGDSYGEFGGGGYGGGFRAGGPYSARGGSYGGYGGNDFSGYGMYGAGGIGAYREDPSMGYSARYGAGFSRGYDFRGGYGGPDESYGAYNSGGA

Query:  PNAGGYAGSYDMGMGTGYPAGGR--GSFYGSRGAGGYDGAGSAPSGRYHPYG
           GG  G YD     GY  GG   G  YG  G G Y+  G+    +   YG
Subjt:  PNAGGYAGSYDMGMGTGYPAGGR--GSFYGSRGAGGYDGAGSAPSGRYHPYG

Q8W034 Heterogeneous nuclear ribonucleoprotein 13.1e-3036.46Show/hide
Query:  GKIFVGGLPRETTSGWF---FFLRLYVSYAV---DRKTGHPRGFGFVTYADHSVVDKVIEDTHIINGKQVEIKRTIPK--------------GSSSSRDF
        GK+FVGG+  ET        F     VS A+   D+ TG PRGFGFV ++D SV+D+V+++ H I+ ++V++KR + +                SS  D 
Subjt:  GKIFVGGLPRETTSGWF---FFLRLYVSYAV---DRKTGHPRGFGFVTYADHSVVDKVIEDTHIINGKQVEIKRTIPK--------------GSSSSRDF

Query:  --KTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANP----------PP
          KTKKIFVGG+P ++ ++EFR +F  YG V +  IM D +T+R RGFGF++F++E AVD +L +    +L+G QVE+K+A PK ANP            
Subjt:  --KTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANP----------PP

Query:  APSKRYHDSRPSYSG-----------GYGDSYGEFGGGGYGGGFRAGGPYSARGGSYGGYGGNDFSGYGMYGAGGIGAYREDPSMGYSARYGAGFSRGYD
           + Y  +  SY G             G+    +G  GYG G+   G   A  G+YGGY G+   GYG     G GA    P  GY +  G      +D
Subjt:  APSKRYHDSRPSYSG-----------GYGDSYGEFGGGGYGGGFRAGGPYSARGGSYGGYGGNDFSGYGMYGAGGIGAYREDPSMGYSARYGAGFSRGYD

Query:  --FRGGYGGPDESYGAYNSG-GAPNA-----------------GGYAGSYDMGMGTGYP---AGGRGSFYGSR--GAGGYDGAG
             GYG P    GA +SG G P A                 GGY+GS D G G        GGR S  GS   G+GGY G G
Subjt:  --FRGGYGGPDESYGAYNSG-GAPNA-----------------GGYAGSYDMGMGTGYP---AGGRGSFYGSR--GAGGYDGAG

Arabidopsis top hitse value%identityAlignment
AT1G17640.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.3e-4339.71Show/hide
Query:  SHADGASAGKIFVGGLPRETTSGWF------FFLRLYVSYAVDRKTGHPRGFGFVTYADHSVVDKVIEDTHIINGKQVEIKRTIPKGSSSS---RDFKTK
        S +  +S GK+FVGG+  ETT+  F      F   +      DR TG+PRGFGFVT+AD +V +KV+E+ H+I+ ++V++KRT+P+G   +      KT+
Subjt:  SHADGASAGKIFVGGLPRETTSGWF------FFLRLYVSYAVDRKTGHPRGFGFVTYADHSVVDKVIEDTHIINGKQVEIKRTIPKGSSSS---RDFKTK

Query:  KIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPPA----PSKRYHDSRP
        KIFVGG+P  ++EDE +++F  YG++ EHQIM DH T RSRGFGF+TF+TE +VD L ++G   EL   QVEIK+AEPK+     +     +   +D   
Subjt:  KIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPPA----PSKRYHDSRP

Query:  SYSGGYGDSYGEFGG-GGYGGGFRAGGPYSARGGSYGGYGGNDF-SGYGMYGAGGIGAYREDPSMGYSARYGAGFSRGYDFRGGYGGPDESYGAYNSG-G
        SYSG   + Y  + G GGYGG              YG Y GN   +  G YG GG          GY   YG G   G  F  GYG     Y    SG G
Subjt:  SYSGGYGDSYGEFGG-GGYGGGFRAGGPYSARGGSYGGYGGNDF-SGYGMYGAGGIGAYREDPSMGYSARYGAGFSRGYDFRGGYGGPDESYGAYNSG-G

Query:  APNAGGYAGSYDMGMGTGYPAGGRGSFYGSRGAGGYDGAGSAPSGRYHPY
           A  Y G    G G    + G+G+  G+ G+G           RYHPY
Subjt:  APNAGGYAGSYDMGMGTGYPAGGRGSFYGSRGAGGYDGAGSAPSGRYHPY

AT2G33410.1 RNA-binding (RRM/RBD/RNP motifs) family protein8.1e-3436.36Show/hide
Query:  GKIFVGGLPRETTSGWF------FFLRLYVSYAVDRKTGHPRGFGFVTYADHSVVDKVIEDTHIINGKQVEIKRTI------PKGSS----SSRDF----
        GK+F+GG+  +T           F   L V+   ++ TG PRGFGFV ++D +V+D+V++D H I+ + V++KR +      P G S    +SR+F    
Subjt:  GKIFVGGLPRETTSGWF------FFLRLYVSYAVDRKTGHPRGFGFVTYADHSVVDKVIEDTHIINGKQVEIKRTI------PKGSS----SSRDF----

Query:  --KTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPPA---------
          +TKKIFVGG+P ++  DEFR +F  YG V +  IM D +T R RGFGF++F++E +V DL+ +    +L G QVE+K+A PK ANP  A         
Subjt:  --KTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPPA---------

Query:  -------------------PSKRYHDSR------PSYSG-GYGDSYG----EFGGGGYGG-GFRAGGPY---SARGGSYG-----GYGGNDFSGYGMYGA
                            S RY   +      P Y G GYG  YG      G GG+GG G  AG PY   S  G  +G      +G    SGYG  G 
Subjt:  -------------------PSKRYHDSR------PSYSG-GYGDSYG----EFGGGGYGG-GFRAGGPY---SARGGSYG-----GYGGNDFSGYGMYGA

Query:  GGIGAYREDPSMGYSARYGAGFSRGYDFRG-GYGGPDESYG---AY-----NSGGAPN---AGGYAGSYDMGMGTGYPAGGRGSFYGSRGAGGYDG
        G    +      G +    AG S GY  +G GYGG D SYG   AY      SG  PN    GGYA + D        +GG G+  G+ G  GY G
Subjt:  GGIGAYREDPSMGYSARYGAGFSRGYDFRG-GYGGPDESYG---AY-----NSGGAPN---AGGYAGSYDMGMGTGYPAGGRGSFYGSRGAGGYDG

AT3G13224.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.1e-5459.44Show/hide
Query:  SRHDPPSHADGASAGKIFVGGLPRETTSGWF---FFLRLYVSYAV---DRKTGHPRGFGFVTYADHSVVDKVIEDTHIINGKQVEIKRTIPKGS--SSSR
        SR+D     DGAS GKIF+GGL ++TT+  F   F     ++ +V   DR TG PRGFGF+T+AD SVVDKVIEDTH+INGKQVEIKRTIPKG+  + S+
Subjt:  SRHDPPSHADGASAGKIFVGGLPRETTSGWF---FFLRLYVSYAV---DRKTGHPRGFGFVTYADHSVVDKVIEDTHIINGKQVEIKRTIPKGS--SSSR

Query:  DFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLELAGSQVEIKK
        D KTKKIFVGGIP++V EDE +DFF +YG V EHQ++RDH T+RSRGFGF+ F++E+ VD+LL+ GN +++A +QV + K
Subjt:  DFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLELAGSQVEIKK

AT3G13224.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.5e-7252.2Show/hide
Query:  SRHDPPSHADGASAGKIFVGGLPRETTSGWF---FFLRLYVSYAV---DRKTGHPRGFGFVTYADHSVVDKVIEDTHIINGKQVEIKRTIPKGS--SSSR
        SR+D     DGAS GKIF+GGL ++TT+  F   F     ++ +V   DR TG PRGFGF+T+AD SVVDKVIEDTH+INGKQVEIKRTIPKG+  + S+
Subjt:  SRHDPPSHADGASAGKIFVGGLPRETTSGWF---FFLRLYVSYAV---DRKTGHPRGFGFVTYADHSVVDKVIEDTHIINGKQVEIKRTIPKGS--SSSR

Query:  DFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPPAPSKRYHDSR
        D KTKKIFVGGIP++V EDE +DFF +YG V EHQ++RDH T+RSRGFGF+ F++E+ VD+LL+ GN +++A +QVEIKKAEPKK+     PS   H   
Subjt:  DFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPPAPSKRYHDSR

Query:  PSYSGGYGDSYGEFGG--GGYG---GGFRA-GGPYSARGGSYG---GYGGNDF-SGYGMYGAGGIGAYREDPSMGYSAR---YGAGF-SRGYDFRGGYGG
         S +  Y    G +GG  GGYG   G  R+ GGP S   G YG   G  G +F  GY  YG G +G YR +P +GYS+R   YG+GF   GY  RGG G 
Subjt:  PSYSGGYGDSYGEFGG--GGYG---GGFRA-GGPYSARGGSYG---GYGGNDF-SGYGMYGAGGIGAYREDPSMGYSAR---YGAGF-SRGYDFRGGYGG

Query:  PDESYGAYNSGGAPNAGGYAGSYDMGMGTGYPAGGRGSFYGSRGAGGYDGAGSAPSGRYHPYGR
           +Y  Y  GG    GGY G    G G  Y +GG G  Y   GAGG  G G + S RYHPY R
Subjt:  PDESYGAYNSGGAPNAGGYAGSYDMGMGTGYPAGGRGSFYGSRGAGGYDGAGSAPSGRYHPYGR

AT5G40490.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.1e-9454.44Show/hide
Query:  MDSKPNDAATNGEHDDAKPLNH-KDDGSRHDPPSHADGASAGKIFVGGLPRETTSGWFFFLRLYVSYA--------VDRKTGHPRGFGFVTYADHSVVDK
        MD    +     E  D KP    +DD  +  P S     SAGKIFVGGL RETTS    FL+ +  Y          DRKTG PRGFGFVTYAD SVVDK
Subjt:  MDSKPNDAATNGEHDDAKPLNH-KDDGSRHDPPSHADGASAGKIFVGGLPRETTSGWFFFLRLYVSYA--------VDRKTGHPRGFGFVTYADHSVVDK

Query:  VIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLELAG
        VI+D HII GKQVEIKRTIP+GS SS DFKTKKIFVGGIP+SVD+DEF++FFMQ+GE+KEHQIMRDHST RSRGFGF+T+E+E  VD LLA GNR+EL+G
Subjt:  VIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLELAG

Query:  SQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDSYGEFGGGGY---GGGFRAGGPY-SARGGSYGGYGGNDFSGYGMYG-AGGIGAYREDPSMGYSA
        +QVEIKKAEPKK N    PSKR+ DSR ++ GGYGD YG   GGGY   GG +++GG Y   R G YGGYGG +F GYG  G  GG+G YR +P++GYS 
Subjt:  SQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDSYGEFGGGGY---GGGFRAGGPY-SARGGSYGGYGGNDFSGYGMYG-AGGIGAYREDPSMGYSA

Query:  RY---GAGFSR-GYDF---------------------RGGYGGPDESY---------GAYNSG-GAPNAGGY--AGSYDM---------GMGTGYPAGGR
        RY   G G++R GY                        GGYGGP  SY         G Y  G G    GGY   G YDM         G G G    G 
Subjt:  RY---GAGFSR-GYDF---------------------RGGYGGPDESY---------GAYNSG-GAPNAGGY--AGSYDM---------GMGTGYPAGGR

Query:  GSFYGSRGAGGYDGAGSAPSGRYHPYGR
        GSFYG  G GG  G G   SGRYHPYGR
Subjt:  GSFYGSRGAGGYDGAGSAPSGRYHPYGR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTTCATATTTTCTGGTTTTGCAAGATTGCTCGCTCCCAGTGGAAAAGCTCTCAATTCTGGCACATTTGGTCACCCAGACCTGCTGCTAATTTTTCTCTACTTCTC
ATGGACTGTCAAGAGCCTTTGTGTGGTCGGATTTCGCTGTTCTTGTCGCGTTTTTGTATGGTCTCTATGGAATGCTCGAAATGGTTTGAAATTTCAAGATCTCTCTCCGT
TGCATGATCTTGGTGAGTGGGCGAATAAGTACATTCATACCTTTCAGGTTGCTGACTTGTCTGTCTGTTTCAGTCGGTCCCCACCGCTCAGGCGTTCTCCGGTTCGCTGG
CAGCCCCCTCCAGGCGATTATTTCAAGGTCAATGTAGATGCTGGTTTCCTCCAGGATCTTGGTGAGAATATTGATTTGGCTGAGGCTCATGTCGTTATAGAAGGTGTTTG
TCTATCTCATCATATGGGTTTTCGACCAATTATGATCGAATCAGACTCCCAACATGTGATTAATCTTCTCTCCGATCCGTCGGATGACTTGTCTGACGTTGGCGGCTTAG
CCATTTCCCTCGTTCACTTGTCTTCTCCCCCCTCCTCTCTTCAAGCTCCTCTGTTCCCTTTAATGTCGGAAAACTCCATGGATTCCAAGCCGAATGATGCTGCCACTAAT
GGTGAACACGACGACGCCAAGCCCTTGAACCACAAAGACGACGGGAGTAGACACGACCCTCCCTCCCATGCCGACGGAGCCAGTGCTGGGAAAATCTTCGTTGGGGGTTT
ACCGCGGGAAACGACTTCCGGTTGGTTTTTTTTTTTACGGTTGTACGTTTCCTATGCAGTTGACCGCAAGACTGGACATCCCCGCGGATTCGGGTTTGTGACTTATGCTG
ATCACTCTGTGGTAGATAAAGTCATTGAGGACACACATATTATTAATGGGAAACAAGTGGAAATCAAGCGAACAATACCCAAAGGTTCTTCCAGCTCTCGCGATTTCAAG
ACTAAGAAGATTTTTGTTGGTGGAATTCCTACATCTGTAGATGAAGATGAGTTCAGGGATTTCTTTATGCAATATGGTGAGGTTAAGGAGCACCAGATCATGCGTGACCA
CTCCACTAGTCGGTCTCGTGGGTTTGGTTTTATTACATTTGAGACAGAGCAAGCAGTTGATGATCTCTTGGCAAATGGAAACAGGCTTGAGTTGGCAGGCAGTCAGGTGG
AGATCAAGAAGGCAGAGCCGAAAAAGGCAAATCCTCCTCCAGCTCCTTCAAAGAGATACCATGATTCAAGGCCAAGTTACAGTGGTGGCTATGGGGATTCATATGGGGAG
TTTGGAGGTGGCGGGTATGGTGGTGGTTTTAGGGCAGGCGGACCATACAGTGCTAGAGGTGGTAGCTATGGTGGATATGGTGGAAATGATTTTAGTGGCTATGGAATGTA
TGGTGCTGGTGGCATTGGAGCTTACAGGGAAGACCCCTCCATGGGATATTCTGCTCGTTATGGAGCAGGCTTCAGCAGAGGTTATGATTTTAGAGGTGGTTATGGTGGAC
CTGATGAGAGTTATGGTGCGTATAACAGCGGTGGTGCTCCTAATGCTGGTGGGTATGCAGGTAGCTATGACATGGGCATGGGCACTGGATACCCTGCTGGTGGTAGAGGC
TCCTTCTATGGAAGTAGAGGAGCAGGAGGATATGATGGTGCGGGGAGTGCTCCAAGTGGTCGATATCATCCTTATGGACGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTTTCATATTTTCTGGTTTTGCAAGATTGCTCGCTCCCAGTGGAAAAGCTCTCAATTCTGGCACATTTGGTCACCCAGACCTGCTGCTAATTTTTCTCTACTTCTC
ATGGACTGTCAAGAGCCTTTGTGTGGTCGGATTTCGCTGTTCTTGTCGCGTTTTTGTATGGTCTCTATGGAATGCTCGAAATGGTTTGAAATTTCAAGATCTCTCTCCGT
TGCATGATCTTGGTGAGTGGGCGAATAAGTACATTCATACCTTTCAGGTTGCTGACTTGTCTGTCTGTTTCAGTCGGTCCCCACCGCTCAGGCGTTCTCCGGTTCGCTGG
CAGCCCCCTCCAGGCGATTATTTCAAGGTCAATGTAGATGCTGGTTTCCTCCAGGATCTTGGTGAGAATATTGATTTGGCTGAGGCTCATGTCGTTATAGAAGGTGTTTG
TCTATCTCATCATATGGGTTTTCGACCAATTATGATCGAATCAGACTCCCAACATGTGATTAATCTTCTCTCCGATCCGTCGGATGACTTGTCTGACGTTGGCGGCTTAG
CCATTTCCCTCGTTCACTTGTCTTCTCCCCCCTCCTCTCTTCAAGCTCCTCTGTTCCCTTTAATGTCGGAAAACTCCATGGATTCCAAGCCGAATGATGCTGCCACTAAT
GGTGAACACGACGACGCCAAGCCCTTGAACCACAAAGACGACGGGAGTAGACACGACCCTCCCTCCCATGCCGACGGAGCCAGTGCTGGGAAAATCTTCGTTGGGGGTTT
ACCGCGGGAAACGACTTCCGGTTGGTTTTTTTTTTTACGGTTGTACGTTTCCTATGCAGTTGACCGCAAGACTGGACATCCCCGCGGATTCGGGTTTGTGACTTATGCTG
ATCACTCTGTGGTAGATAAAGTCATTGAGGACACACATATTATTAATGGGAAACAAGTGGAAATCAAGCGAACAATACCCAAAGGTTCTTCCAGCTCTCGCGATTTCAAG
ACTAAGAAGATTTTTGTTGGTGGAATTCCTACATCTGTAGATGAAGATGAGTTCAGGGATTTCTTTATGCAATATGGTGAGGTTAAGGAGCACCAGATCATGCGTGACCA
CTCCACTAGTCGGTCTCGTGGGTTTGGTTTTATTACATTTGAGACAGAGCAAGCAGTTGATGATCTCTTGGCAAATGGAAACAGGCTTGAGTTGGCAGGCAGTCAGGTGG
AGATCAAGAAGGCAGAGCCGAAAAAGGCAAATCCTCCTCCAGCTCCTTCAAAGAGATACCATGATTCAAGGCCAAGTTACAGTGGTGGCTATGGGGATTCATATGGGGAG
TTTGGAGGTGGCGGGTATGGTGGTGGTTTTAGGGCAGGCGGACCATACAGTGCTAGAGGTGGTAGCTATGGTGGATATGGTGGAAATGATTTTAGTGGCTATGGAATGTA
TGGTGCTGGTGGCATTGGAGCTTACAGGGAAGACCCCTCCATGGGATATTCTGCTCGTTATGGAGCAGGCTTCAGCAGAGGTTATGATTTTAGAGGTGGTTATGGTGGAC
CTGATGAGAGTTATGGTGCGTATAACAGCGGTGGTGCTCCTAATGCTGGTGGGTATGCAGGTAGCTATGACATGGGCATGGGCACTGGATACCCTGCTGGTGGTAGAGGC
TCCTTCTATGGAAGTAGAGGAGCAGGAGGATATGATGGTGCGGGGAGTGCTCCAAGTGGTCGATATCATCCTTATGGACGGTAA
Protein sequenceShow/hide protein sequence
MFFIFSGFARLLAPSGKALNSGTFGHPDLLLIFLYFSWTVKSLCVVGFRCSCRVFVWSLWNARNGLKFQDLSPLHDLGEWANKYIHTFQVADLSVCFSRSPPLRRSPVRW
QPPPGDYFKVNVDAGFLQDLGENIDLAEAHVVIEGVCLSHHMGFRPIMIESDSQHVINLLSDPSDDLSDVGGLAISLVHLSSPPSSLQAPLFPLMSENSMDSKPNDAATN
GEHDDAKPLNHKDDGSRHDPPSHADGASAGKIFVGGLPRETTSGWFFFLRLYVSYAVDRKTGHPRGFGFVTYADHSVVDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFK
TKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDSYGE
FGGGGYGGGFRAGGPYSARGGSYGGYGGNDFSGYGMYGAGGIGAYREDPSMGYSARYGAGFSRGYDFRGGYGGPDESYGAYNSGGAPNAGGYAGSYDMGMGTGYPAGGRG
SFYGSRGAGGYDGAGSAPSGRYHPYGR