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Spg001992 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg001992
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCACTA en-spm transposon protein
Genome locationscaffold10:3827977..3828720
RNA-Seq ExpressionSpg001992
SyntenySpg001992
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038887408.1 poly [ADP-ribose] polymerase 1-like isoform X1 [Benincasa hispida]1.2e-1545.54Show/hide
Query:  MLGQSREHDASTVYEEDADPVVVGSSTEPSSAQASGSNAL-----RG--RRPRGHSRNIKIDRYVATHNRIPIHIDESIGKPVCKFATQFSGTIGCLTRD
        +L  S +   + +  +  D   +GSSTE  +  ASGS +      RG  RR RGHSRN+++DR+V  H RI I IDE +GKPVC  AT+FS  IG + R+
Subjt:  MLGQSREHDASTVYEEDADPVVVGSSTEPSSAQASGSNAL-----RG--RRPRGHSRNIKIDRYVATHNRIPIHIDESIGKPVCKFATQFSGTIGCLTRD

Query:  TIPLHYKSWPEV
        TIPL  K W +V
Subjt:  TIPLHYKSWPEV

XP_038887409.1 poly [ADP-ribose] polymerase 1-like isoform X2 [Benincasa hispida]1.2e-1545.54Show/hide
Query:  MLGQSREHDASTVYEEDADPVVVGSSTEPSSAQASGSNAL-----RG--RRPRGHSRNIKIDRYVATHNRIPIHIDESIGKPVCKFATQFSGTIGCLTRD
        +L  S +   + +  +  D   +GSSTE  +  ASGS +      RG  RR RGHSRN+++DR+V  H RI I IDE +GKPVC  AT+FS  IG + R+
Subjt:  MLGQSREHDASTVYEEDADPVVVGSSTEPSSAQASGSNAL-----RG--RRPRGHSRNIKIDRYVATHNRIPIHIDESIGKPVCKFATQFSGTIGCLTRD

Query:  TIPLHYKSWPEV
        TIPL  K W +V
Subjt:  TIPLHYKSWPEV

XP_038887411.1 poly [ADP-ribose] polymerase 1-like isoform X4 [Benincasa hispida]1.2e-1545.54Show/hide
Query:  MLGQSREHDASTVYEEDADPVVVGSSTEPSSAQASGSNAL-----RG--RRPRGHSRNIKIDRYVATHNRIPIHIDESIGKPVCKFATQFSGTIGCLTRD
        +L  S +   + +  +  D   +GSSTE  +  ASGS +      RG  RR RGHSRN+++DR+V  H RI I IDE +GKPVC  AT+FS  IG + R+
Subjt:  MLGQSREHDASTVYEEDADPVVVGSSTEPSSAQASGSNAL-----RG--RRPRGHSRNIKIDRYVATHNRIPIHIDESIGKPVCKFATQFSGTIGCLTRD

Query:  TIPLHYKSWPEV
        TIPL  K W +V
Subjt:  TIPLHYKSWPEV

XP_038887413.1 uncharacterized protein LOC120077557 isoform X5 [Benincasa hispida]1.2e-1545.54Show/hide
Query:  MLGQSREHDASTVYEEDADPVVVGSSTEPSSAQASGSNAL-----RG--RRPRGHSRNIKIDRYVATHNRIPIHIDESIGKPVCKFATQFSGTIGCLTRD
        +L  S +   + +  +  D   +GSSTE  +  ASGS +      RG  RR RGHSRN+++DR+V  H RI I IDE +GKPVC  AT+FS  IG + R+
Subjt:  MLGQSREHDASTVYEEDADPVVVGSSTEPSSAQASGSNAL-----RG--RRPRGHSRNIKIDRYVATHNRIPIHIDESIGKPVCKFATQFSGTIGCLTRD

Query:  TIPLHYKSWPEV
        TIPL  K W +V
Subjt:  TIPLHYKSWPEV

XP_038887414.1 poly [ADP-ribose] polymerase 1-like isoform X6 [Benincasa hispida]1.2e-1545.54Show/hide
Query:  MLGQSREHDASTVYEEDADPVVVGSSTEPSSAQASGSNAL-----RG--RRPRGHSRNIKIDRYVATHNRIPIHIDESIGKPVCKFATQFSGTIGCLTRD
        +L  S +   + +  +  D   +GSSTE  +  ASGS +      RG  RR RGHSRN+++DR+V  H RI I IDE +GKPVC  AT+FS  IG + R+
Subjt:  MLGQSREHDASTVYEEDADPVVVGSSTEPSSAQASGSNAL-----RG--RRPRGHSRNIKIDRYVATHNRIPIHIDESIGKPVCKFATQFSGTIGCLTRD

Query:  TIPLHYKSWPEV
        TIPL  K W +V
Subjt:  TIPLHYKSWPEV

TrEMBL top hitse value%identityAlignment
A0A5A7T9T1 Uncharacterized protein1.8e-0934.53Show/hide
Query:  FCRDDVDPIVVPPQD-------------LNKQTMLGQSREHDASTVYEEDADPVVVGSSTEPSSAQASG-SNALRGRRPRGHSRNIKIDRYVATHNRIPI
        FCR DV+P VV  ++             +N +T   QS + D  T             S +PS+   S      RGR  RG+ RNI++D++V  H +I I
Subjt:  FCRDDVDPIVVPPQD-------------LNKQTMLGQSREHDASTVYEEDADPVVVGSSTEPSSAQASG-SNALRGRRPRGHSRNIKIDRYVATHNRIPI

Query:  HIDESIGKPVCKFATQFSGTIGCLTRDTIPLHYKSWPEV
         I+E  GKPV  FA + +  IG   R+TIPL  ++W  V
Subjt:  HIDESIGKPVCKFATQFSGTIGCLTRDTIPLHYKSWPEV

A0A5A7TFG0 Transposon protein, putative, CACTA, En/Spm sub-class1.8e-0934.53Show/hide
Query:  FCRDDVDPIVVPPQD-------------LNKQTMLGQSREHDASTVYEEDADPVVVGSSTEPSSAQASG-SNALRGRRPRGHSRNIKIDRYVATHNRIPI
        FCR DV+P VV  ++             +N +T   QS + D  T             S +PS+   S      RGR  RG+ RNI++D++V  H +I I
Subjt:  FCRDDVDPIVVPPQD-------------LNKQTMLGQSREHDASTVYEEDADPVVVGSSTEPSSAQASG-SNALRGRRPRGHSRNIKIDRYVATHNRIPI

Query:  HIDESIGKPVCKFATQFSGTIGCLTRDTIPLHYKSWPEV
         I+E  GKPV  FA + +  IG   R+TIPL  ++W  V
Subjt:  HIDESIGKPVCKFATQFSGTIGCLTRDTIPLHYKSWPEV

A0A5A7TRX4 DUF4216 domain-containing protein6.8e-0937.6Show/hide
Query:  FCRDDVDPIVVPPQDLNKQTMLGQSREHDASTVYEEDADPVVVGSSTEPSSAQASGSNALRGRRPRGHSRNIKIDRYVATHNRIPIHIDESIGKPVCKFA
        FCR DV+P VV  ++   Q    QSR            D   +   TE    Q+S S+   GR  RG+ RNI++D++V  H +I I I+E  GKPV  FA
Subjt:  FCRDDVDPIVVPPQDLNKQTMLGQSREHDASTVYEEDADPVVVGSSTEPSSAQASGSNALRGRRPRGHSRNIKIDRYVATHNRIPIHIDESIGKPVCKFA

Query:  TQFSGTIGCLTRDTIPLHYKSWPEV
         + +  IG   R+TIPL  ++W  V
Subjt:  TQFSGTIGCLTRDTIPLHYKSWPEV

A0A5A7US78 Uncharacterized protein5.2e-0933.81Show/hide
Query:  FCRDDVDPIVVPPQD-------------LNKQTMLGQSREHDASTVYEEDADPVVVGSSTEPSSAQASG-SNALRGRRPRGHSRNIKIDRYVATHNRIPI
        FCR DV+P VV  ++             +N +T   QS + D  T             S +PS+   S      RGR  RG+ RNI++D++V  H +I I
Subjt:  FCRDDVDPIVVPPQD-------------LNKQTMLGQSREHDASTVYEEDADPVVVGSSTEPSSAQASG-SNALRGRRPRGHSRNIKIDRYVATHNRIPI

Query:  HIDESIGKPVCKFATQFSGTIGCLTRDTIPLHYKSWPEV
         I+E  GKPV  F  + +  IG   R+TIPL  ++W  V
Subjt:  HIDESIGKPVCKFATQFSGTIGCLTRDTIPLHYKSWPEV

A0A5D3E0V3 Uncharacterized protein5.2e-0933.81Show/hide
Query:  FCRDDVDPIVVPPQD-------------LNKQTMLGQSREHDASTVYEEDADPVVVGSSTEPSSAQASG-SNALRGRRPRGHSRNIKIDRYVATHNRIPI
        FCR DV+P VV  ++             +N +T   QS + D  T             S +PS+   S      RGR  RG+ RNI++D++V  H +I I
Subjt:  FCRDDVDPIVVPPQD-------------LNKQTMLGQSREHDASTVYEEDADPVVVGSSTEPSSAQASG-SNALRGRRPRGHSRNIKIDRYVATHNRIPI

Query:  HIDESIGKPVCKFATQFSGTIGCLTRDTIPLHYKSWPEV
         I+E  GKPV  F  + +  IG   R+TIPL  ++W  V
Subjt:  HIDESIGKPVCKFATQFSGTIGCLTRDTIPLHYKSWPEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGCTCCCCTCTTGGGGGATGTAGTCAATGTAGTCCATAAACCTATACAGTTCAATGCATTTTGTAGAGACGATGTTGACCCTATTGTCGTTCCACCTCAAGATTT
GAATAAACAGACCATGTTGGGTCAAAGTCGAGAGCACGATGCATCGACGGTGTATGAAGAGGATGCGGACCCCGTAGTGGTTGGTTCCTCGACTGAGCCTTCATCTGCTC
AAGCTTCAGGATCGAATGCATTGCGAGGAAGACGACCGAGAGGACATAGTCGAAACATCAAAATTGATCGGTATGTGGCTACACACAATAGGATACCCATTCACATTGAT
GAGTCCATCGGCAAACCAGTGTGTAAGTTTGCTACACAATTCAGCGGGACGATTGGTTGCCTCACACGAGATACAATTCCGTTGCATTACAAGAGTTGGCCTGAGGTCCG
CCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGCTCCCCTCTTGGGGGATGTAGTCAATGTAGTCCATAAACCTATACAGTTCAATGCATTTTGTAGAGACGATGTTGACCCTATTGTCGTTCCACCTCAAGATTT
GAATAAACAGACCATGTTGGGTCAAAGTCGAGAGCACGATGCATCGACGGTGTATGAAGAGGATGCGGACCCCGTAGTGGTTGGTTCCTCGACTGAGCCTTCATCTGCTC
AAGCTTCAGGATCGAATGCATTGCGAGGAAGACGACCGAGAGGACATAGTCGAAACATCAAAATTGATCGGTATGTGGCTACACACAATAGGATACCCATTCACATTGAT
GAGTCCATCGGCAAACCAGTGTGTAAGTTTGCTACACAATTCAGCGGGACGATTGGTTGCCTCACACGAGATACAATTCCGTTGCATTACAAGAGTTGGCCTGAGGTCCG
CCAATGA
Protein sequenceShow/hide protein sequence
MFAPLLGDVVNVVHKPIQFNAFCRDDVDPIVVPPQDLNKQTMLGQSREHDASTVYEEDADPVVVGSSTEPSSAQASGSNALRGRRPRGHSRNIKIDRYVATHNRIPIHID
ESIGKPVCKFATQFSGTIGCLTRDTIPLHYKSWPEVRQ