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Spg001998 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg001998
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionIntegrase catalytic domain-containing protein
Genome locationscaffold8:33712706..33715578
RNA-Seq ExpressionSpg001998
SyntenySpg001998
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]7.2e-1041.38Show/hide
Query:  KNLFPKVFKDVNFQ-ERMEIMKKRDFLN-----EKGF----SNRAGTLPEFISRVISQYKWQEFCAHPQEVVVPLVREFYADLREESISMAIVRGKMVSF
        K +  K  K V F+ E  E   + +  N     EKGF    S   G LP FI++VI+Q+ W++FCAHP++ +VPLVREFYA+L +   +   VRG  VS+
Subjt:  KNLFPKVFKDVNFQ-ERMEIMKKRDFLN-----EKGF----SNRAGTLPEFISRVISQYKWQEFCAHPQEVVVPLVREFYADLREESISMAIVRGKMVSF

Query:  SSIDINKVYRLKAPLN
        S   IN V+ L  P++
Subjt:  SSIDINKVYRLKAPLN

PON42276.1 hypothetical protein PanWU01x14_283280 [Parasponia andersonii]1.8e-0840.22Show/hide
Query:  EIMKKRDFLNEKGF---SNRAGTLPEFISRVISQYKWQEFCAHPQEVVVPLVREFYADLREESISMAIVRGKMVSFSSIDINKVYRLKAPLN
        E ++ R    EKGF   +++    P FI  VI+Q+ WQ FCAHP++++ PLVREFYA++         VRG  V  S+  IN +Y L  P++
Subjt:  EIMKKRDFLNEKGF---SNRAGTLPEFISRVISQYKWQEFCAHPQEVVVPLVREFYADLREESISMAIVRGKMVSFSSIDINKVYRLKAPLN

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]4.2e-1040.17Show/hide
Query:  MKKRDFLNEKGF----SNRAGTLPEFISRVISQYKWQEFCAHPQEVVVPLVREFYADLREESISMAIVRGKMVSFSSIDINKVYRLKAPLNPRGNDVIRN
        ++ R    EKGF    S   G LP FI++VI+Q+ W++FCAHP++ +VPLVREFYA+L +   +   VRG  VS+S   IN V+ L  P++   ++ I+N
Subjt:  MKKRDFLNEKGF----SNRAGTLPEFISRVISQYKWQEFCAHPQEVVVPLVREFYADLREESISMAIVRGKMVSFSSIDINKVYRLKAPLNPRGNDVIRN

Query:  HLCQTDEGSIETCGQQG
           Q     +ET    G
Subjt:  HLCQTDEGSIETCGQQG

PON65868.1 hypothetical protein PanWU01x14_113570 [Parasponia andersonii]4.6e-0938.26Show/hide
Query:  KNLFPKVFKDVNFQERM------EIMKKRDFLNEKGF---SNRAGTLPEFISRVISQYKWQEFCAHPQEVVVPLVREFYADLREESISMAIVRGKMVSFS
        K +  K  K V F+         E ++ R    EKGF   +++    P FI+ VI+Q+ WQ FCAHP++ +VPLVREFYA++         VRG  V  S
Subjt:  KNLFPKVFKDVNFQERM------EIMKKRDFLNEKGF---SNRAGTLPEFISRVISQYKWQEFCAHPQEVVVPLVREFYADLREESISMAIVRGKMVSFS

Query:  SIDINKVYRLKAPLN
        S  IN +Y L  P++
Subjt:  SIDINKVYRLKAPLN

PON85987.1 hypothetical protein TorRG33x02_181920, partial [Trema orientale]1.4e-0837.93Show/hide
Query:  KNLFPKVFKDVNFQER------MEIMKKRDFLNEKGF----SNRAGTLPEFISRVISQYKWQEFCAHPQEVVVPLVREFYADLREESISMAIVRGKMVSF
        K +  K  K V F+         E ++K+    EKGF    S   G  P FI++VI+Q+ W++FCAHP++ +VPLVREFYA+L +       VRG  V +
Subjt:  KNLFPKVFKDVNFQER------MEIMKKRDFLNEKGF----SNRAGTLPEFISRVISQYKWQEFCAHPQEVVVPLVREFYADLREESISMAIVRGKMVSF

Query:  SSIDINKVYRLKAPLN
        +   IN V+ L  P++
Subjt:  SSIDINKVYRLKAPLN

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)3.5e-1041.38Show/hide
Query:  KNLFPKVFKDVNFQ-ERMEIMKKRDFLN-----EKGF----SNRAGTLPEFISRVISQYKWQEFCAHPQEVVVPLVREFYADLREESISMAIVRGKMVSF
        K +  K  K V F+ E  E   + +  N     EKGF    S   G LP FI++VI+Q+ W++FCAHP++ +VPLVREFYA+L +   +   VRG  VS+
Subjt:  KNLFPKVFKDVNFQ-ERMEIMKKRDFLN-----EKGF----SNRAGTLPEFISRVISQYKWQEFCAHPQEVVVPLVREFYADLREESISMAIVRGKMVSF

Query:  SSIDINKVYRLKAPLN
        S   IN V+ L  P++
Subjt:  SSIDINKVYRLKAPLN

A0A2P5B0K0 Uncharacterized protein8.6e-0940.22Show/hide
Query:  EIMKKRDFLNEKGF---SNRAGTLPEFISRVISQYKWQEFCAHPQEVVVPLVREFYADLREESISMAIVRGKMVSFSSIDINKVYRLKAPLN
        E ++ R    EKGF   +++    P FI  VI+Q+ WQ FCAHP++++ PLVREFYA++         VRG  V  S+  IN +Y L  P++
Subjt:  EIMKKRDFLNEKGF---SNRAGTLPEFISRVISQYKWQEFCAHPQEVVVPLVREFYADLREESISMAIVRGKMVSFSSIDINKVYRLKAPLN

A0A2P5BCG4 Uncharacterized protein (Fragment)2.0e-1040.17Show/hide
Query:  MKKRDFLNEKGF----SNRAGTLPEFISRVISQYKWQEFCAHPQEVVVPLVREFYADLREESISMAIVRGKMVSFSSIDINKVYRLKAPLNPRGNDVIRN
        ++ R    EKGF    S   G LP FI++VI+Q+ W++FCAHP++ +VPLVREFYA+L +   +   VRG  VS+S   IN V+ L  P++   ++ I+N
Subjt:  MKKRDFLNEKGF----SNRAGTLPEFISRVISQYKWQEFCAHPQEVVVPLVREFYADLREESISMAIVRGKMVSFSSIDINKVYRLKAPLNPRGNDVIRN

Query:  HLCQTDEGSIETCGQQG
           Q     +ET    G
Subjt:  HLCQTDEGSIETCGQQG

A0A2P5CXV1 Uncharacterized protein2.3e-0938.26Show/hide
Query:  KNLFPKVFKDVNFQERM------EIMKKRDFLNEKGF---SNRAGTLPEFISRVISQYKWQEFCAHPQEVVVPLVREFYADLREESISMAIVRGKMVSFS
        K +  K  K V F+         E ++ R    EKGF   +++    P FI+ VI+Q+ WQ FCAHP++ +VPLVREFYA++         VRG  V  S
Subjt:  KNLFPKVFKDVNFQERM------EIMKKRDFLNEKGF---SNRAGTLPEFISRVISQYKWQEFCAHPQEVVVPLVREFYADLREESISMAIVRGKMVSFS

Query:  SIDINKVYRLKAPLN
        S  IN +Y L  P++
Subjt:  SIDINKVYRLKAPLN

A0A2P5EK98 Uncharacterized protein (Fragment)6.5e-0937.93Show/hide
Query:  KNLFPKVFKDVNFQER------MEIMKKRDFLNEKGF----SNRAGTLPEFISRVISQYKWQEFCAHPQEVVVPLVREFYADLREESISMAIVRGKMVSF
        K +  K  K V F+         E ++K+    EKGF    S   G  P FI++VI+Q+ W++FCAHP++ +VPLVREFYA+L +       VRG  V +
Subjt:  KNLFPKVFKDVNFQER------MEIMKKRDFLNEKGF----SNRAGTLPEFISRVISQYKWQEFCAHPQEVVVPLVREFYADLREESISMAIVRGKMVSF

Query:  SSIDINKVYRLKAPLN
        +   IN V+ L  P++
Subjt:  SSIDINKVYRLKAPLN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCCGAGCAATGGGAGCTCAGAGACGTGTTGTTCTTGAAGAGGAAGCGAATAGGAACAAACCATTCGTTACCTATAGTGCAAGGAAGAGAAGTCCTAAGAAAAATGT
GCCCGAAAAGCCGCTTGTTATCGAGCCACTCAAAGTAGCAAGAATGCCACCGGACGTTTTTGAAGGCATCATCCACCAAGCTGTGGCAAAGGCTCTCGTGATTGCTGAAG
GATACAGGACTGAACAAGAAGCTTTGAAGGAGGTTGAGGCTGAGAGAGAGATGGAAAATCAGCACATGATGGAGGAGGATGAGTCTGCGAGAAAAGAGATCTTGAAGAAG
AGGAAAGACAAGAGGCCGAGAGGACCAAATTATGCTGCTGGGCGACTGGAGGGAGCAAATTCTGTGCTGCAGCAAAACTGGGAGCAGAAACTGCCACGTCACAGCTCGTT
AGCCAACTTCATGAACCGACTTCTGTTGAGTTATTTTCGGGATAAAGGAGCAAGGAGAGCCTTACACGAACCCAACAATGACCCACCAGCAGCTGACAGCACCTCTTTGG
GAGAGAAGAGGGATGAAGAGGAAAAAGAAAGCAAGGAGGCCGAGACCTCCACTGACTCAGAGACAGAATCCGACTCAGAGATCAAGGAATTGGATGATGACCAAGTCCAT
GGACTGCCTCATGCAGTTCCTCCTACCATCTCACCCGCCAAGCCAAAGGACAAATCACCTAAGGTTGCATCTCCTAAAAATCTATTCCCTAAGGTATTCAAAGATGTTAA
TTTTCAGGAACGGATGGAGATCATGAAGAAAAGGGATTTCCTCAATGAGAAGGGATTCTCTAACAGAGCAGGAACACTGCCAGAATTCATAAGTAGAGTTATCTCACAGT
ACAAGTGGCAGGAGTTCTGTGCTCACCCTCAGGAGGTTGTAGTGCCTTTAGTTCGTGAATTTTACGCCGACCTGAGGGAGGAAAGTATCAGTATGGCGATTGTGAGAGGC
AAAATGGTCAGCTTCTCTTCCATAGACATTAACAAGGTGTACAGACTCAAAGCACCCCTGAATCCAAGAGGGAATGATGTTATTAGGAACCACCTCTGCCAAACAGATGA
AGGAAGCATTGAAACTTGTGGCCAACAAGGGTTTTCAGTGGAAAGAGTCACAAACGAAGGTGAAGACTCTAGTGTCAAGCGACCTGAAGCCAGAATCGGCAGTTTGGCTT
CACTTTCTGAAGAACCGCTTGATGCCAACCACCCACGATAG
mRNA sequenceShow/hide mRNA sequence
ATGATCCGAGCAATGGGAGCTCAGAGACGTGTTGTTCTTGAAGAGGAAGCGAATAGGAACAAACCATTCGTTACCTATAGTGCAAGGAAGAGAAGTCCTAAGAAAAATGT
GCCCGAAAAGCCGCTTGTTATCGAGCCACTCAAAGTAGCAAGAATGCCACCGGACGTTTTTGAAGGCATCATCCACCAAGCTGTGGCAAAGGCTCTCGTGATTGCTGAAG
GATACAGGACTGAACAAGAAGCTTTGAAGGAGGTTGAGGCTGAGAGAGAGATGGAAAATCAGCACATGATGGAGGAGGATGAGTCTGCGAGAAAAGAGATCTTGAAGAAG
AGGAAAGACAAGAGGCCGAGAGGACCAAATTATGCTGCTGGGCGACTGGAGGGAGCAAATTCTGTGCTGCAGCAAAACTGGGAGCAGAAACTGCCACGTCACAGCTCGTT
AGCCAACTTCATGAACCGACTTCTGTTGAGTTATTTTCGGGATAAAGGAGCAAGGAGAGCCTTACACGAACCCAACAATGACCCACCAGCAGCTGACAGCACCTCTTTGG
GAGAGAAGAGGGATGAAGAGGAAAAAGAAAGCAAGGAGGCCGAGACCTCCACTGACTCAGAGACAGAATCCGACTCAGAGATCAAGGAATTGGATGATGACCAAGTCCAT
GGACTGCCTCATGCAGTTCCTCCTACCATCTCACCCGCCAAGCCAAAGGACAAATCACCTAAGGTTGCATCTCCTAAAAATCTATTCCCTAAGGTATTCAAAGATGTTAA
TTTTCAGGAACGGATGGAGATCATGAAGAAAAGGGATTTCCTCAATGAGAAGGGATTCTCTAACAGAGCAGGAACACTGCCAGAATTCATAAGTAGAGTTATCTCACAGT
ACAAGTGGCAGGAGTTCTGTGCTCACCCTCAGGAGGTTGTAGTGCCTTTAGTTCGTGAATTTTACGCCGACCTGAGGGAGGAAAGTATCAGTATGGCGATTGTGAGAGGC
AAAATGGTCAGCTTCTCTTCCATAGACATTAACAAGGTGTACAGACTCAAAGCACCCCTGAATCCAAGAGGGAATGATGTTATTAGGAACCACCTCTGCCAAACAGATGA
AGGAAGCATTGAAACTTGTGGCCAACAAGGGTTTTCAGTGGAAAGAGTCACAAACGAAGGTGAAGACTCTAGTGTCAAGCGACCTGAAGCCAGAATCGGCAGTTTGGCTT
CACTTTCTGAAGAACCGCTTGATGCCAACCACCCACGATAG
Protein sequenceShow/hide protein sequence
MIRAMGAQRRVVLEEEANRNKPFVTYSARKRSPKKNVPEKPLVIEPLKVARMPPDVFEGIIHQAVAKALVIAEGYRTEQEALKEVEAEREMENQHMMEEDESARKEILKK
RKDKRPRGPNYAAGRLEGANSVLQQNWEQKLPRHSSLANFMNRLLLSYFRDKGARRALHEPNNDPPAADSTSLGEKRDEEEKESKEAETSTDSETESDSEIKELDDDQVH
GLPHAVPPTISPAKPKDKSPKVASPKNLFPKVFKDVNFQERMEIMKKRDFLNEKGFSNRAGTLPEFISRVISQYKWQEFCAHPQEVVVPLVREFYADLREESISMAIVRG
KMVSFSSIDINKVYRLKAPLNPRGNDVIRNHLCQTDEGSIETCGQQGFSVERVTNEGEDSSVKRPEARIGSLASLSEEPLDANHPR