; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg002001 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg002001
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionFanconi-associated nuclease
Genome locationscaffold10:2167899..2170689
RNA-Seq ExpressionSpg002001
SyntenySpg002001
Gene Ontology termsGO:0009987 - cellular process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8718449.1 hypothetical protein F3Y22_tig00110013pilonHSYRG00240 [Hibiscus syriacus]9.6e-1023.97Show/hide
Query:  LSYERFVNHFARAKYINMLKRDFLFERGF-------SGDLPHFLRVGITNHGWELFCSKPDPVNSKVVREFYANIDKNEGFQVIVRGVAVEWSPGAINSL
        +++++F N  A+A++ N   R+  FE GF        G  P  + + +    W  F   P  VN+ +V+EFYANI K     + VRG  + ++  AIN  
Subjt:  LSYERFVNHFARAKYINMLKRDFLFERGF-------SGDLPHFLRVGITNHGWELFCSKPDPVNSKVVREFYANIDKNEGFQVIVRGVAVEWSPGAINSL

Query:  YNLQDF--PHACYNEMA--------------------------VAPSNEQLNATAR------------------------------------EVG-----
        ++LQ+    HA + E A                           + + E+L   A+                                    +VG     
Subjt:  YNLQDF--PHACYNEMA--------------------------VAPSNEQLNATAR------------------------------------EVG-----

Query:  -IEEDVGK----LFFPNTITLLCKRAGVPESAEDVILLDKGVIDTPNFAWLQRTQEGLEMPTSIDLICLFS--DFKRGLVCGVHHILEQLTLSASRQEFA
         + + +GK    L FPN IT LC++  V E+A D IL     I       L     GLE P S D +   S    +      +  + E +T + ++    
Subjt:  -IEEDVGK----LFFPNTITLLCKRAGVPESAEDVILLDKGVIDTPNFAWLQRTQEGLEMPTSIDLICLFS--DFKRGLVCGVHHILEQLTLSASRQEFA

Query:  ERQAHTFWNYVKRRDVALRNALQADFSKPYPTFPLFPDHLLNPWIPPPPVEREEEDDDAGQED
              F+ YVK RDV + +  Q         FP FPD +L  +      E E +  D    D
Subjt:  ERQAHTFWNYVKRRDVALRNALQADFSKPYPTFPLFPDHLLNPWIPPPPVEREEEDDDAGQED

KAE8725369.1 hypothetical protein F3Y22_tig00008957pilonHSYRG00158 [Hibiscus syriacus]1.6e-0923.7Show/hide
Query:  FLFERGFSGDLPHFLRVGITNHGWELFCSKPDPVNSKVVREFYANIDKNEGFQVIVRGVAVEWSPGAINSLYNLQ--DFPHACY----------------
        F+F      DL   +   +T H W++F   P  VN+ +V+EFY+NI +   + V+V G+++ ++  AIN  + LQ  +  HA +                
Subjt:  FLFERGFSGDLPHFLRVGITNHGWELFCSKPDPVNSKVVREFYANIDKNEGFQVIVRGVAVEWSPGAINSLYNLQ--DFPHACY----------------

Query:  ---------NEMAVAPSNEQLNATAREVGIEEDVGKLFFPNTITLLCKRAGVPESAEDVILLDKGVIDTPNFAWLQRTQE--GLEMPTSIDLICLFSDFK
                  +M+    +++       + ++     L FPN I  LC++  VPE   D +L     I       L   +E  G E   +      F   +
Subjt:  ---------NEMAVAPSNEQLNATAREVGIEEDVGKLFFPNTITLLCKRAGVPESAEDVILLDKGVIDTPNFAWLQRTQE--GLEMPTSIDLICLFSDFK

Query:  RGLVCGVHHILEQLTLSASRQEFAER---QAHTFWNYVKRRDVALRNALQADFSKPYPTFPLFPDHLLNP
                + LEQ+      QE   +   +  T++ Y K RD  L NAL            +FP+ L+ P
Subjt:  RGLVCGVHHILEQLTLSASRQEFAER---QAHTFWNYVKRRDVALRNALQADFSKPYPTFPLFPDHLLNP

PON42276.1 hypothetical protein PanWU01x14_283280 [Parasponia andersonii]2.8e-0937.39Show/hide
Query:  NMLKRDFLFERGFSGD------LPHFLRVGITNHGWELFCSKPDPVNSKVVREFYANIDKNEGFQVIVRGVAVEWSPGAINSLYNLQDFPHACYNEMAVA
        N+  R    E+GF GD       P F+   IT H W+LFC+ P+ + + +VREFYAN+   +   V VRGV V  S  AIN++Y L D P   ++E   A
Subjt:  NMLKRDFLFERGFSGD------LPHFLRVGITNHGWELFCSKPDPVNSKVVREFYANIDKNEGFQVIVRGVAVEWSPGAINSLYNLQDFPHACYNEMAVA

Query:  PSNEQLNATAREVGI
         +  +L      V I
Subjt:  PSNEQLNATAREVGI

PON65868.1 hypothetical protein PanWU01x14_113570 [Parasponia andersonii]1.8e-0835.94Show/hide
Query:  RFVNHFARAKY-INMLKRDFLFERGFSGD------LPHFLRVGITNHGWELFCSKPDPVNSKVVREFYANIDKNEGFQVIVRGVAVEWSPGAINSLYNLQ
        +F +  A  +Y  N+  R    E+GF GD       P F+   IT H W+LFC+ P+     +VREFYAN+   +   V VRGV V  S  AIN++Y L 
Subjt:  RFVNHFARAKY-INMLKRDFLFERGFSGD------LPHFLRVGITNHGWELFCSKPDPVNSKVVREFYANIDKNEGFQVIVRGVAVEWSPGAINSLYNLQ

Query:  DFPHACYNEMAVAPSNEQLNATAREVGI
        D P   ++E   A +  +L      V I
Subjt:  DFPHACYNEMAVAPSNEQLNATAREVGI

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]9.6e-1036.08Show/hide
Query:  EDVGKLFFPNTITLLCKRAGVPESAEDVILLDKGVIDTPNFAWLQRTQEG----LEMPTSIDLICLFSDFKRGLVCGVHHILEQLTLSASRQEFAERQAH
        +  G LFFP+ IT LC+ A  P    +  L + G ID    A  + TQEG     + P+S       S    G V      LEQ     S+QE   +Q  
Subjt:  EDVGKLFFPNTITLLCKRAGVPESAEDVILLDKGVIDTPNFAWLQRTQEG----LEMPTSIDLICLFSDFKRGLVCGVHHILEQLTLSASRQEFAERQAH

Query:  TFWNYVKRRDVALRNALQADFSKPYPTFPLFPDHLLNPWIPPPPVEREEEDDDAGQED
         FW Y K RD AL+ ALQ +F++P PTFP FP  +L         E E E D  G  +
Subjt:  TFWNYVKRRDVALRNALQADFSKPYPTFPLFPDHLLNPWIPPPPVEREEEDDDAGQED

TrEMBL top hitse value%identityAlignment
A0A2P5B0K0 Uncharacterized protein1.4e-0937.39Show/hide
Query:  NMLKRDFLFERGFSGD------LPHFLRVGITNHGWELFCSKPDPVNSKVVREFYANIDKNEGFQVIVRGVAVEWSPGAINSLYNLQDFPHACYNEMAVA
        N+  R    E+GF GD       P F+   IT H W+LFC+ P+ + + +VREFYAN+   +   V VRGV V  S  AIN++Y L D P   ++E   A
Subjt:  NMLKRDFLFERGFSGD------LPHFLRVGITNHGWELFCSKPDPVNSKVVREFYANIDKNEGFQVIVRGVAVEWSPGAINSLYNLQDFPHACYNEMAVA

Query:  PSNEQLNATAREVGI
         +  +L      V I
Subjt:  PSNEQLNATAREVGI

A0A2P5BCG4 Uncharacterized protein (Fragment)8.8e-0931.68Show/hide
Query:  GKLFFPNTITLLCKRAGVPESAEDVILLDKGVIDTPNFAWL--QRTQEGLEMPTSIDLICLFSDFKRGLVCGVHHILEQLTLSASRQEF--------AER
        G LFFP+ IT LC+ A  P    +  L + G ID    A +  +   E  + P+S       S+   G +      LEQ       Q++          +
Subjt:  GKLFFPNTITLLCKRAGVPESAEDVILLDKGVIDTPNFAWL--QRTQEGLEMPTSIDLICLFSDFKRGLVCGVHHILEQLTLSASRQEF--------AER

Query:  QAHTFWNYVKRRDVALRNALQADFSKPYPTFPLFPDHLLNPWIPPPPVEREEEDDDAGQED
        Q   FW Y K RD AL+ ALQ +F++P PTFP FP  +L         E E E D  G  +
Subjt:  QAHTFWNYVKRRDVALRNALQADFSKPYPTFPLFPDHLLNPWIPPPPVEREEEDDDAGQED

A0A2P5CXV1 Uncharacterized protein8.8e-0935.94Show/hide
Query:  RFVNHFARAKY-INMLKRDFLFERGFSGD------LPHFLRVGITNHGWELFCSKPDPVNSKVVREFYANIDKNEGFQVIVRGVAVEWSPGAINSLYNLQ
        +F +  A  +Y  N+  R    E+GF GD       P F+   IT H W+LFC+ P+     +VREFYAN+   +   V VRGV V  S  AIN++Y L 
Subjt:  RFVNHFARAKY-INMLKRDFLFERGFSGD------LPHFLRVGITNHGWELFCSKPDPVNSKVVREFYANIDKNEGFQVIVRGVAVEWSPGAINSLYNLQ

Query:  DFPHACYNEMAVAPSNEQLNATAREVGI
        D P   ++E   A +  +L      V I
Subjt:  DFPHACYNEMAVAPSNEQLNATAREVGI

A0A2P5DXM3 Uncharacterized protein4.7e-1036.08Show/hide
Query:  EDVGKLFFPNTITLLCKRAGVPESAEDVILLDKGVIDTPNFAWLQRTQEG----LEMPTSIDLICLFSDFKRGLVCGVHHILEQLTLSASRQEFAERQAH
        +  G LFFP+ IT LC+ A  P    +  L + G ID    A  + TQEG     + P+S       S    G V      LEQ     S+QE   +Q  
Subjt:  EDVGKLFFPNTITLLCKRAGVPESAEDVILLDKGVIDTPNFAWLQRTQEG----LEMPTSIDLICLFSDFKRGLVCGVHHILEQLTLSASRQEFAERQAH

Query:  TFWNYVKRRDVALRNALQADFSKPYPTFPLFPDHLLNPWIPPPPVEREEEDDDAGQED
         FW Y K RD AL+ ALQ +F++P PTFP FP  +L         E E E D  G  +
Subjt:  TFWNYVKRRDVALRNALQADFSKPYPTFPLFPDHLLNPWIPPPPVEREEEDDDAGQED

A0A6A3BU96 Uncharacterized protein4.7e-1023.97Show/hide
Query:  LSYERFVNHFARAKYINMLKRDFLFERGF-------SGDLPHFLRVGITNHGWELFCSKPDPVNSKVVREFYANIDKNEGFQVIVRGVAVEWSPGAINSL
        +++++F N  A+A++ N   R+  FE GF        G  P  + + +    W  F   P  VN+ +V+EFYANI K     + VRG  + ++  AIN  
Subjt:  LSYERFVNHFARAKYINMLKRDFLFERGF-------SGDLPHFLRVGITNHGWELFCSKPDPVNSKVVREFYANIDKNEGFQVIVRGVAVEWSPGAINSL

Query:  YNLQDF--PHACYNEMA--------------------------VAPSNEQLNATAR------------------------------------EVG-----
        ++LQ+    HA + E A                           + + E+L   A+                                    +VG     
Subjt:  YNLQDF--PHACYNEMA--------------------------VAPSNEQLNATAR------------------------------------EVG-----

Query:  -IEEDVGK----LFFPNTITLLCKRAGVPESAEDVILLDKGVIDTPNFAWLQRTQEGLEMPTSIDLICLFS--DFKRGLVCGVHHILEQLTLSASRQEFA
         + + +GK    L FPN IT LC++  V E+A D IL     I       L     GLE P S D +   S    +      +  + E +T + ++    
Subjt:  -IEEDVGK----LFFPNTITLLCKRAGVPESAEDVILLDKGVIDTPNFAWLQRTQEGLEMPTSIDLICLFS--DFKRGLVCGVHHILEQLTLSASRQEFA

Query:  ERQAHTFWNYVKRRDVALRNALQADFSKPYPTFPLFPDHLLNPWIPPPPVEREEEDDDAGQED
              F+ YVK RDV + +  Q         FP FPD +L  +      E E +  D    D
Subjt:  ERQAHTFWNYVKRRDVALRNALQADFSKPYPTFPLFPDHLLNPWIPPPPVEREEEDDDAGQED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAAACGAGAGGAAAGAAAGAGAGAGAGATGGAGGAGAATGTGCCTACTACGCCAGAGGTTTCTAAGAAGAAAGAGAAGAAGAAAAGAACGCATGTAGAAAGGGA
AGCCAAACGGTTTAAAAGGCTTCAAGAGGCTGATGTTTCCAAAGTACTAGAGAAGGTAATAGAGGACATTGCTGAAGAGGAGATTCTGGAAGAGATAGTAAAGGATCCAC
CTCGTCGTCGTCGTAAGCAGAAAGCAGGACGAGTAAAAAGGATCCAGACCAACGCTCCATCTCCTCTTTCGACTGACTCAGAGAAAGAAGAATCTGAAAATCAAGAAGAG
ATTGGGAAGAAGATTACAGAAGATGAAACCGAGAAGATAAATGGTGAGGATAAGGGCAAAGGTATTGCAGGAGCCGGGGTTGAAACAGAAGTGGCTCGCCCAGAAGAAAG
GGGTTTGTCTTATGAGCGCTTTGTCAATCATTTTGCTAGGGCAAAATATATTAACATGCTGAAGAGAGATTTCCTATTCGAGAGAGGGTTCAGTGGTGACCTTCCGCATT
TTCTGAGGGTTGGCATCACAAACCATGGTTGGGAGTTATTCTGTTCCAAGCCAGATCCTGTGAATTCTAAAGTGGTGCGAGAATTCTATGCGAACATTGACAAGAACGAG
GGTTTTCAAGTTATAGTTCGTGGAGTAGCTGTCGAGTGGAGTCCTGGTGCCATCAATTCACTGTACAACCTTCAAGATTTCCCGCATGCTTGTTATAATGAGATGGCAGT
AGCACCATCTAATGAGCAGTTGAATGCTACAGCTCGGGAAGTTGGAATAGAAGAGGACGTGGGAAAACTATTCTTTCCAAACACAATTACACTGCTTTGTAAGAGAGCAG
GGGTTCCAGAGAGTGCAGAGGACGTGATCCTATTAGATAAGGGAGTAATCGACACGCCTAACTTTGCATGGCTTCAGAGAACGCAAGAGGGTCTTGAAATGCCTACCTCT
ATTGATTTAATTTGTCTTTTTAGTGATTTCAAAAGGGGGCTAGTTTGTGGTGTTCACCATATCTTAGAACAACTCACACTTTCAGCTAGCAGGCAAGAGTTCGCTGAAAG
ACAGGCCCATACCTTTTGGAATTATGTTAAAAGACGTGATGTCGCATTGAGGAATGCACTCCAAGCTGATTTTTCCAAGCCCTATCCAACATTTCCCCTATTCCCTGATC
ATTTGCTAAACCCTTGGATCCCACCACCACCCGTTGAAAGAGAAGAGGAAGATGACGATGCTGGTCAGGAGGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAAACGAGAGGAAAGAAAGAGAGAGAGATGGAGGAGAATGTGCCTACTACGCCAGAGGTTTCTAAGAAGAAAGAGAAGAAGAAAAGAACGCATGTAGAAAGGGA
AGCCAAACGGTTTAAAAGGCTTCAAGAGGCTGATGTTTCCAAAGTACTAGAGAAGGTAATAGAGGACATTGCTGAAGAGGAGATTCTGGAAGAGATAGTAAAGGATCCAC
CTCGTCGTCGTCGTAAGCAGAAAGCAGGACGAGTAAAAAGGATCCAGACCAACGCTCCATCTCCTCTTTCGACTGACTCAGAGAAAGAAGAATCTGAAAATCAAGAAGAG
ATTGGGAAGAAGATTACAGAAGATGAAACCGAGAAGATAAATGGTGAGGATAAGGGCAAAGGTATTGCAGGAGCCGGGGTTGAAACAGAAGTGGCTCGCCCAGAAGAAAG
GGGTTTGTCTTATGAGCGCTTTGTCAATCATTTTGCTAGGGCAAAATATATTAACATGCTGAAGAGAGATTTCCTATTCGAGAGAGGGTTCAGTGGTGACCTTCCGCATT
TTCTGAGGGTTGGCATCACAAACCATGGTTGGGAGTTATTCTGTTCCAAGCCAGATCCTGTGAATTCTAAAGTGGTGCGAGAATTCTATGCGAACATTGACAAGAACGAG
GGTTTTCAAGTTATAGTTCGTGGAGTAGCTGTCGAGTGGAGTCCTGGTGCCATCAATTCACTGTACAACCTTCAAGATTTCCCGCATGCTTGTTATAATGAGATGGCAGT
AGCACCATCTAATGAGCAGTTGAATGCTACAGCTCGGGAAGTTGGAATAGAAGAGGACGTGGGAAAACTATTCTTTCCAAACACAATTACACTGCTTTGTAAGAGAGCAG
GGGTTCCAGAGAGTGCAGAGGACGTGATCCTATTAGATAAGGGAGTAATCGACACGCCTAACTTTGCATGGCTTCAGAGAACGCAAGAGGGTCTTGAAATGCCTACCTCT
ATTGATTTAATTTGTCTTTTTAGTGATTTCAAAAGGGGGCTAGTTTGTGGTGTTCACCATATCTTAGAACAACTCACACTTTCAGCTAGCAGGCAAGAGTTCGCTGAAAG
ACAGGCCCATACCTTTTGGAATTATGTTAAAAGACGTGATGTCGCATTGAGGAATGCACTCCAAGCTGATTTTTCCAAGCCCTATCCAACATTTCCCCTATTCCCTGATC
ATTTGCTAAACCCTTGGATCCCACCACCACCCGTTGAAAGAGAAGAGGAAGATGACGATGCTGGTCAGGAGGACTAG
Protein sequenceShow/hide protein sequence
MAKTRGKKEREMEENVPTTPEVSKKKEKKKRTHVEREAKRFKRLQEADVSKVLEKVIEDIAEEEILEEIVKDPPRRRRKQKAGRVKRIQTNAPSPLSTDSEKEESENQEE
IGKKITEDETEKINGEDKGKGIAGAGVETEVARPEERGLSYERFVNHFARAKYINMLKRDFLFERGFSGDLPHFLRVGITNHGWELFCSKPDPVNSKVVREFYANIDKNE
GFQVIVRGVAVEWSPGAINSLYNLQDFPHACYNEMAVAPSNEQLNATAREVGIEEDVGKLFFPNTITLLCKRAGVPESAEDVILLDKGVIDTPNFAWLQRTQEGLEMPTS
IDLICLFSDFKRGLVCGVHHILEQLTLSASRQEFAERQAHTFWNYVKRRDVALRNALQADFSKPYPTFPLFPDHLLNPWIPPPPVEREEEDDDAGQED