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Spg002011 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg002011
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionAvrRpt-cleavage domain-containing protein
Genome locationscaffold10:1901308..1904463
RNA-Seq ExpressionSpg002011
SyntenySpg002011
Gene Ontology termsGO:0071586 - CAAX-box protein processing (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0004222 - metalloendopeptidase activity (molecular function)
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site
IPR040387 - RPM1-interacting protein 4/NOI4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581070.1 Protein NOI4, partial [Cucurbita argyrosperma subsp. sororia]3.0e-2484.06Show/hide
Query:  MILANIQADKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNAAAKNNQSRPDENYQYSPM
        M +  +  D+GRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGN AAKNN SRP+ENYQYSPM
Subjt:  MILANIQADKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNAAAKNNQSRPDENYQYSPM

KAG7017799.1 RPM1-interacting protein 4, partial [Cucurbita argyrosperma subsp. argyrosperma]7.2e-2690.91Show/hide
Query:  ADKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNAAAKNNQSRPDENYQYSPMVSNI
        +D+GRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGN AAKNN SRP+ENYQYSPMVSN+
Subjt:  ADKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNAAAKNNQSRPDENYQYSPMVSNI

KGN58221.1 hypothetical protein Csa_017629 [Cucumis sativus]7.5e-2390.32Show/hide
Query:  ADKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNAAAKNNQSRPDENYQYSPM
        +DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGN AAK+N SR +ENYQYSPM
Subjt:  ADKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNAAAKNNQSRPDENYQYSPM

XP_038883812.1 protein NOI4-like isoform X1 [Benincasa hispida]1.4e-2476.54Show/hide
Query:  NWHSSIGKLM---ILANIQADKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNAAAKNNQSRPDENYQYSPM
        N+ SS  K M   +   +  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGN  AKNN SRP+ENYQYSPM
Subjt:  NWHSSIGKLM---ILANIQADKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNAAAKNNQSRPDENYQYSPM

XP_038883820.1 protein NOI4-like isoform X2 [Benincasa hispida]4.0e-2481.43Show/hide
Query:  LMILANIQADKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNAAAKNNQSRPDENYQYSPM
        +++   +  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGN  AKNN SRP+ENYQYSPM
Subjt:  LMILANIQADKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNAAAKNNQSRPDENYQYSPM

TrEMBL top hitse value%identityAlignment
A0A0A0LDP9 AvrRpt-cleavage domain-containing protein3.6e-2390.32Show/hide
Query:  ADKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNAAAKNNQSRPDENYQYSPM
        +DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGN AAK+N SR +ENYQYSPM
Subjt:  ADKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNAAAKNNQSRPDENYQYSPM

A0A5D3E371 RPM1-interacting protein 4-like6.2e-2391.8Show/hide
Query:  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNAAAKNNQSRPDENYQYSPM
        DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGN AAK+N SR +ENYQYSPM
Subjt:  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNAAAKNNQSRPDENYQYSPM

A0A5J5AK52 AvrRpt-cleavage domain-containing protein1.2e-1573.44Show/hide
Query:  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEA--PGNAAAKN-NQSRPDENYQYSPM
        DKGRPLPKFGEWDVNNPASA+GFTVIF+KARD+KK+N A  PG  + KN N S+ +ENYQY PM
Subjt:  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEA--PGNAAAKN-NQSRPDENYQYSPM

A0A5J5BYY8 AvrRpt-cleavage domain-containing protein2.1e-1567.65Show/hide
Query:  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEA-------PGNAAAKNNQSRPDENYQYSPM
        DKGRPLPKFGEWDVNNPASA+GFTVIF+KARD+KK+N A        G    KN+ S+ +ENYQYSPM
Subjt:  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEA-------PGNAAAKNNQSRPDENYQYSPM

B9SLS6 NOI, putative5.6e-1680Show/hide
Query:  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNAAA---KNNQSRPDENYQ
        DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSN A G  AA    NN  +PD+NYQ
Subjt:  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNAAA---KNNQSRPDENYQ

SwissProt top hitse value%identityAlignment
O22633 Protein NOI46.6e-1481.4Show/hide
Query:  ADKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGN
        +DKGRPLPKFGEWDVN+PASAEGFTVIF+KARDEKK+   PG+
Subjt:  ADKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGN

Q8GYN5 RPM1-interacting protein 41.5e-0532.35Show/hide
Query:  QQASNGFGRATTDLS-DNVTGIYFKCMKFNWHSSIGKLMILANIQADKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSN-EAPGNAAAKNNQSRPD
        + A+   GRA+ + S DN + ++         S      + A+   +K   +PKFG+WD NNP+SA+G+T IF+K R+E+ S     G++    +QS  +
Subjt:  QQASNGFGRATTDLS-DNVTGIYFKCMKFNWHSSIGKLMILANIQADKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSN-EAPGNAAAKNNQSRPD

Query:  EN
         N
Subjt:  EN

Arabidopsis top hitse value%identityAlignment
AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein2.0e-1375.56Show/hide
Query:  ADKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKK---SNEAPG
        ADKGRPLPKFGEWDVN+P+SAEGFTVIF+KAR+EKK    +++PG
Subjt:  ADKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKK---SNEAPG

AT5G55850.1 RPM1-interacting protein 4 (RIN4) family protein4.7e-1581.4Show/hide
Query:  ADKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGN
        +DKGRPLPKFGEWDVN+PASAEGFTVIF+KARDEKK+   PG+
Subjt:  ADKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGN

AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein8.0e-1583.33Show/hide
Query:  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGN
        DKGRPLPKFGEWDVN+PASAEGFTVIF+KARDEKK+   PG+
Subjt:  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGN

AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein8.0e-1583.33Show/hide
Query:  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGN
        DKGRPLPKFGEWDVN+PASAEGFTVIF+KARDEKK+   PG+
Subjt:  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGN

AT5G63270.1 RPM1-interacting protein 4 (RIN4) family protein6.8e-1469.09Show/hide
Query:  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNAAAKNNQSRPDEN
        +KG+PLPKFGEWDVNNPASAEGFTVIFSKA DEKK+ +A G  A  N+   P  N
Subjt:  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNAAAKNNQSRPDEN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACGATGAACGAACGAGATCTCTTGTACTAGATCTAGGCAACACAACAGATCCTCCTCCCTCCCCTACGGTCGCGAGATCTAGGTTGGTTGAGCAACAACAAGCGAG
CAACGGATTTGGGCGAGCGACAACGGATCTGAGCGACAACGTGACGGGAATATACTTCAAATGTATGAAATTTAATTGGCATTCCAGCATTGGAAAACTAATGATACTTG
CAAATATTCAAGCTGATAAAGGTCGCCCCTTGCCGAAGTTCGGCGAGTGGGATGTCAACAATCCGGCCTCAGCCGAAGGCTTTACAGTAATATTTAGCAAAGCTAGAGAT
GAGAAGAAGTCAAATGAGGCTCCTGGGAACGCAGCAGCAAAAAACAATCAATCCAGACCGGATGAGAATTATCAGTATTCTCCCATGGTGAGTAATATCGCTAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGAACGATGAACGAACGAGATCTCTTGTACTAGATCTAGGCAACACAACAGATCCTCCTCCCTCCCCTACGGTCGCGAGATCTAGGTTGGTTGAGCAACAACAAGCGAG
CAACGGATTTGGGCGAGCGACAACGGATCTGAGCGACAACGTGACGGGAATATACTTCAAATGTATGAAATTTAATTGGCATTCCAGCATTGGAAAACTAATGATACTTG
CAAATATTCAAGCTGATAAAGGTCGCCCCTTGCCGAAGTTCGGCGAGTGGGATGTCAACAATCCGGCCTCAGCCGAAGGCTTTACAGTAATATTTAGCAAAGCTAGAGAT
GAGAAGAAGTCAAATGAGGCTCCTGGGAACGCAGCAGCAAAAAACAATCAATCCAGACCGGATGAGAATTATCAGTATTCTCCCATGGTGAGTAATATCGCTAACTAG
Protein sequenceShow/hide protein sequence
MNDERTRSLVLDLGNTTDPPPSPTVARSRLVEQQQASNGFGRATTDLSDNVTGIYFKCMKFNWHSSIGKLMILANIQADKGRPLPKFGEWDVNNPASAEGFTVIFSKARD
EKKSNEAPGNAAAKNNQSRPDENYQYSPMVSNIAN