; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg002023 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg002023
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptioncystinosin homolog
Genome locationscaffold10:1946344..1946907
RNA-Seq ExpressionSpg002023
SyntenySpg002023
Gene Ontology termsGO:0015811 - L-cystine transport (biological process)
GO:0005774 - vacuolar membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0015184 - L-cystine transmembrane transporter activity (molecular function)
InterPro domainsIPR005282 - Lysosomal cystine transporter
IPR006603 - PQ-loop repeat


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588928.1 Cystinosin-like protein, partial [Cucurbita argyrosperma subsp. sororia]2.9e-3588.24Show/hide
Query:  MASWNSVPMEIIYQVLGWASIICWALAAYPQVILNFRRKSVVGLSFDYVILNFTKQSSYLIYNASLFFSATVQRQYFEKYGYDQV
        MASWNSVPMEIIYQ+LGW++IICWALA+YPQ+ILNF RKSVVGLSFD+V+LNFTKQSSYLIYNASLFFSATVQRQYFEKYG+DQ+
Subjt:  MASWNSVPMEIIYQVLGWASIICWALAAYPQVILNFRRKSVVGLSFDYVILNFTKQSSYLIYNASLFFSATVQRQYFEKYGYDQV

KAG7022696.1 Cystinosin-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]4.9e-3587.06Show/hide
Query:  MASWNSVPMEIIYQVLGWASIICWALAAYPQVILNFRRKSVVGLSFDYVILNFTKQSSYLIYNASLFFSATVQRQYFEKYGYDQV
        MASWNSVPMEIIYQ+LGW+++ICWALA+YPQ+ILNF RKSVVGLSFD+V+LNFTKQSSYLIYNASLFFSATVQRQYFEKYG+DQ+
Subjt:  MASWNSVPMEIIYQVLGWASIICWALAAYPQVILNFRRKSVVGLSFDYVILNFTKQSSYLIYNASLFFSATVQRQYFEKYGYDQV

XP_022928176.1 cystinosin homolog [Cucurbita moschata]4.9e-3587.06Show/hide
Query:  MASWNSVPMEIIYQVLGWASIICWALAAYPQVILNFRRKSVVGLSFDYVILNFTKQSSYLIYNASLFFSATVQRQYFEKYGYDQV
        MASWNSVPMEI+YQ+LGW++IICWALA+YPQ+ILNF RKSVVGLSFD+V+LNFTKQSSYLIYNASLFFSATVQRQYFEKYG+DQ+
Subjt:  MASWNSVPMEIIYQVLGWASIICWALAAYPQVILNFRRKSVVGLSFDYVILNFTKQSSYLIYNASLFFSATVQRQYFEKYGYDQV

XP_023530874.1 cystinosin homolog [Cucurbita pepo subsp. pepo]6.4e-3585.88Show/hide
Query:  MASWNSVPMEIIYQVLGWASIICWALAAYPQVILNFRRKSVVGLSFDYVILNFTKQSSYLIYNASLFFSATVQRQYFEKYGYDQV
        MASWNSVPMEI+YQ+LGW++IICWALA+YPQ++LNF RKSVVGLSFD+V+LNFTKQSSYLIYNASLFFSATVQRQYFEKYG+DQ+
Subjt:  MASWNSVPMEIIYQVLGWASIICWALAAYPQVILNFRRKSVVGLSFDYVILNFTKQSSYLIYNASLFFSATVQRQYFEKYGYDQV

XP_038880439.1 cystinosin homolog [Benincasa hispida]1.8e-3483.53Show/hide
Query:  MASWNSVPMEIIYQVLGWASIICWALAAYPQVILNFRRKSVVGLSFDYVILNFTKQSSYLIYNASLFFSATVQRQYFEKYGYDQV
        M+SWNS+PMEIIY+VLGW SIICWA A YPQ+I+NFRRKSVVGLSFDYV+LNFTKQSSYLIYNA+LFFS TVQ+QYF+KYGYDQ+
Subjt:  MASWNSVPMEIIYQVLGWASIICWALAAYPQVILNFRRKSVVGLSFDYVILNFTKQSSYLIYNASLFFSATVQRQYFEKYGYDQV

TrEMBL top hitse value%identityAlignment
A0A0A0LB92 Uncharacterized protein7.6e-3483.53Show/hide
Query:  MASWNSVPMEIIYQVLGWASIICWALAAYPQVILNFRRKSVVGLSFDYVILNFTKQSSYLIYNASLFFSATVQRQYFEKYGYDQV
        M+SWNS+ MEI+Y VLGW SI+CWALA+YPQVILNFRRKSVVGLSFDY+ILNFTKQSSYLIYNA+LFFS TVQ+QYF+KYGYDQ+
Subjt:  MASWNSVPMEIIYQVLGWASIICWALAAYPQVILNFRRKSVVGLSFDYVILNFTKQSSYLIYNASLFFSATVQRQYFEKYGYDQV

A0A1S3BP09 cystinosin homolog isoform X14.9e-3378.82Show/hide
Query:  MASWNSVPMEIIYQVLGWASIICWALAAYPQVILNFRRKSVVGLSFDYVILNFTKQSSYLIYNASLFFSATVQRQYFEKYGYDQV
        M SWNS+PME++YQVLGW SIICWA + YPQ++LNFRRKSVVGLSFDYV+LNFTKQ+SYLIYNA+LFFS  VQ+QYF+KYGYDQ+
Subjt:  MASWNSVPMEIIYQVLGWASIICWALAAYPQVILNFRRKSVVGLSFDYVILNFTKQSSYLIYNASLFFSATVQRQYFEKYGYDQV

A0A5D3E357 Cystinosin-like protein isoform X14.9e-3378.82Show/hide
Query:  MASWNSVPMEIIYQVLGWASIICWALAAYPQVILNFRRKSVVGLSFDYVILNFTKQSSYLIYNASLFFSATVQRQYFEKYGYDQV
        M SWNS+PME++YQVLGW SIICWA + YPQ++LNFRRKSVVGLSFDYV+LNFTKQ+SYLIYNA+LFFS  VQ+QYF+KYGYDQ+
Subjt:  MASWNSVPMEIIYQVLGWASIICWALAAYPQVILNFRRKSVVGLSFDYVILNFTKQSSYLIYNASLFFSATVQRQYFEKYGYDQV

A0A6J1DN06 cystinosin homolog1.2e-3484.71Show/hide
Query:  MASWNSVPMEIIYQVLGWASIICWALAAYPQVILNFRRKSVVGLSFDYVILNFTKQSSYLIYNASLFFSATVQRQYFEKYGYDQV
        MASWNSVP+EI+Y+VLGW+SIICW +A YPQVILNFRRKSVVG SFDY+ILNFTKQSSYLIYN SLFFSA VQRQYF+KYGYDQ+
Subjt:  MASWNSVPMEIIYQVLGWASIICWALAAYPQVILNFRRKSVVGLSFDYVILNFTKQSSYLIYNASLFFSATVQRQYFEKYGYDQV

A0A6J1EJ63 cystinosin homolog2.4e-3587.06Show/hide
Query:  MASWNSVPMEIIYQVLGWASIICWALAAYPQVILNFRRKSVVGLSFDYVILNFTKQSSYLIYNASLFFSATVQRQYFEKYGYDQV
        MASWNSVPMEI+YQ+LGW++IICWALA+YPQ+ILNF RKSVVGLSFD+V+LNFTKQSSYLIYNASLFFSATVQRQYFEKYG+DQ+
Subjt:  MASWNSVPMEIIYQVLGWASIICWALAAYPQVILNFRRKSVVGLSFDYVILNFTKQSSYLIYNASLFFSATVQRQYFEKYGYDQV

SwissProt top hitse value%identityAlignment
A7MB63 Cystinosin7.1e-1347.22Show/hide
Query:  MEIIYQVLGWASIICWALAAYPQVILNFRRKSVVGLSFDYVILNFTKQSSYLIYNASLFFSATVQRQYFEKY
        + II QV+GW   + W+++ YPQVI N+RRKSVVGLSFD+V+LN     +Y ++N  LF+  +++ Q+  KY
Subjt:  MEIIYQVLGWASIICWALAAYPQVILNFRRKSVVGLSFDYVILNFTKQSSYLIYNASLFFSATVQRQYFEKY

O60931 Cystinosin1.2e-1245.33Show/hide
Query:  SVPMEIIYQVLGWASIICWALAAYPQVILNFRRKSVVGLSFDYVILNFTKQSSYLIYNASLFFSATVQRQYFEKY
        S  + II QV+GW   + W+++ YPQVI+N+RRKSV+GLSFD+V LN T   +Y ++N  L +   ++ Q+  KY
Subjt:  SVPMEIIYQVLGWASIICWALAAYPQVILNFRRKSVVGLSFDYVILNFTKQSSYLIYNASLFFSATVQRQYFEKY

P57757 Cystinosin2.3e-1144.44Show/hide
Query:  MEIIYQVLGWASIICWALAAYPQVILNFRRKSVVGLSFDYVILNFTKQSSYLIYNASLFFSATVQRQYFEKY
        + II QV+GW   + W+++ YPQVI N+RRKSV+GLSFD++ LN T   +Y ++N  L +   +Q ++  KY
Subjt:  MEIIYQVLGWASIICWALAAYPQVILNFRRKSVVGLSFDYVILNFTKQSSYLIYNASLFFSATVQRQYFEKY

P57758 Cystinosin homolog1.6e-2560.49Show/hide
Query:  MASWNSVPMEIIYQVLGWASIICWALAAYPQVILNFRRKSVVGLSFDYVILNFTKQSSYLIYNASLFFSATVQRQYFEKYG
        MASWNS+P+EI Y+++GW +   W+++ YPQ+ILNFRR+SVVGL+FD+V+LN TK SSY+IYN  L+FS  +Q+QYF+ YG
Subjt:  MASWNSVPMEIIYQVLGWASIICWALAAYPQVILNFRRKSVVGLSFDYVILNFTKQSSYLIYNASLFFSATVQRQYFEKYG

Q54WT7 Cystinosin homolog2.0e-1546.58Show/hide
Query:  MEIIYQVLGWASIICWALAAYPQVILNFRRKSVVGLSFDYVILNFTKQSSYLIYNASLFFSATVQRQYFEKYG
        + II  ++GW    CW+L+ YPQVILNFR+K+V+GLSFD+++ N T  + Y ++N+ L+F   V+ +Y++KYG
Subjt:  MEIIYQVLGWASIICWALAAYPQVILNFRRKSVVGLSFDYVILNFTKQSSYLIYNASLFFSATVQRQYFEKYG

Arabidopsis top hitse value%identityAlignment
AT4G36850.1 PQ-loop repeat family protein / transmembrane family protein6.2e-0451.43Show/hide
Query:  LGWASIICWALAAYPQVILNFRRKSVVGLSFDYVI
        LG AS++CW +A  PQVI NFR KS  G+S  +++
Subjt:  LGWASIICWALAAYPQVILNFRRKSVVGLSFDYVI

AT5G40670.1 PQ-loop repeat family protein / transmembrane family protein1.2e-2660.49Show/hide
Query:  MASWNSVPMEIIYQVLGWASIICWALAAYPQVILNFRRKSVVGLSFDYVILNFTKQSSYLIYNASLFFSATVQRQYFEKYG
        MASWNS+P+EI Y+++GW +   W+++ YPQ+ILNFRR+SVVGL+FD+V+LN TK SSY+IYN  L+FS  +Q+QYF+ YG
Subjt:  MASWNSVPMEIIYQVLGWASIICWALAAYPQVILNFRRKSVVGLSFDYVILNFTKQSSYLIYNASLFFSATVQRQYFEKYG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCATGGAATTCAGTTCCGATGGAGATCATATACCAGGTCTTAGGATGGGCTTCCATCATATGCTGGGCACTTGCCGCATATCCTCAGGTCATTCTCAATTTCCG
CCGAAAAAGTGTTGTAGGATTGAGCTTCGATTACGTGATTCTGAATTTCACGAAGCAATCGTCTTATTTGATTTACAACGCTAGTCTCTTCTTCAGCGCCACTGTCCAGA
GGCAGTACTTCGAGAAATACGGCTACGATCAGGTTTTCTTCTTCTTCTTCTTCTTGAGTTCTTCTAATTTAAGTTTCGGTACTTCTCGATTGTTTGACGATTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCATGGAATTCAGTTCCGATGGAGATCATATACCAGGTCTTAGGATGGGCTTCCATCATATGCTGGGCACTTGCCGCATATCCTCAGGTCATTCTCAATTTCCG
CCGAAAAAGTGTTGTAGGATTGAGCTTCGATTACGTGATTCTGAATTTCACGAAGCAATCGTCTTATTTGATTTACAACGCTAGTCTCTTCTTCAGCGCCACTGTCCAGA
GGCAGTACTTCGAGAAATACGGCTACGATCAGGTTTTCTTCTTCTTCTTCTTCTTGAGTTCTTCTAATTTAAGTTTCGGTACTTCTCGATTGTTTGACGATTCTTGA
Protein sequenceShow/hide protein sequence
MASWNSVPMEIIYQVLGWASIICWALAAYPQVILNFRRKSVVGLSFDYVILNFTKQSSYLIYNASLFFSATVQRQYFEKYGYDQVFFFFFFLSSSNLSFGTSRLFDDS