; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg002024 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg002024
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionF-box domain-containing protein
Genome locationscaffold10:3772498..3773127
RNA-Seq ExpressionSpg002024
SyntenySpg002024
Gene Ontology termsNA
InterPro domainsIPR013187 - F-box associated domain, type 3
IPR017451 - F-box associated interaction domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK13067.1 putative F-box protein [Cucumis melo var. makuwa]2.1e-2636.95Show/hide
Query:  VEVFAFGPSSNDWKSVPFSLRLEINDDGVYLNGALFWIGCYNVELESSYKNILVCFDVEEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEMECFG
        VE+FAFG +   W SV F   L + D GVY NG L+W+       +SS   I    D+E E  ++IS PQ             VFD  LYL++ +     
Subjt:  VEVFAFGPSSNDWKSVPFSLRLEINDDGVYLNGALFWIGCYNVELESSYKNILVCFDVEEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEMECFG

Query:  YHVWKIEEEDLWIKEFVIAMPIGRYY----DVSWRPYDVQIIEALEDGKMLCLISRMNLILYDPKTARSKALFEWWDEIREELWIYQIQSFNFDPLSKIL
        Y VWK+++   WIK FVI+ P    +       W    +  I+A EDGK+LCL++ ++LILYDPKT  ++ L +   ++ + L ++ I SFNF+ L  IL
Subjt:  YHVWKIEEEDLWIKEFVIAMPIGRYY----DVSWRPYDVQIIEALEDGKMLCLISRMNLILYDPKTARSKALFEWWDEIREELWIYQIQSFNFDPLSKIL

Query:  GGD
         G+
Subjt:  GGD

XP_004135796.1 putative F-box protein At1g46984 [Cucumis sativus]1.4e-3039.6Show/hide
Query:  VEVFAFGPSSNDWKSVPFSLRLEINDDGVYLNGALFWIGCYNVELE--SSYKNILVCFDVEEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEMEC
        V++FAFG +S +W  V           GVYLNG L+W+G   +     S Y  ++   D+++E+F++ISFP  G D       I V++  LYL+ F  E 
Subjt:  VEVFAFGPSSNDWKSVPFSLRLEINDDGVYLNGALFWIGCYNVELE--SSYKNILVCFDVEEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEMEC

Query:  FGYHVWKIEEEDLWIKEFVIAMPIGRYYDVSWRP--YDVQIIEALEDGKMLCLISRMNLILYDPKTARSKALFEWWDEIREELWIYQIQSFNFDPLSKIL
        F YH WK+EE+  W KEFV+A+P   ++ +   P  Y +Q+I+  EDG +LCL + + LILYDP T   + L     EI+E +W++QI+SF+F+ L  IL
Subjt:  FGYHVWKIEEEDLWIKEFVIAMPIGRYYDVSWRP--YDVQIIEALEDGKMLCLISRMNLILYDPKTARSKALFEWWDEIREELWIYQIQSFNFDPLSKIL

Query:  GG
         G
Subjt:  GG

XP_008450717.1 PREDICTED: putative F-box protein At3g21120 [Cucumis melo]2.1e-2636.06Show/hide
Query:  VEVFAFGPSSNDWKSVPFSLRLEINDDGVYLNGALFWIGCY----NVELESSYKNILVCFDVEEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEM
        V++FAFG +S +W  +           GVY NG L+W+G      N  L S Y  ++   D+ +E+FK+IS P  G +       + V++  LYL++   
Subjt:  VEVFAFGPSSNDWKSVPFSLRLEINDDGVYLNGALFWIGCY----NVELESSYKNILVCFDVEEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEM

Query:  ECFGYHVWKIEEEDLWIKEFVIAMP------IGRYYDVSWRPYDVQIIEALEDGKMLCLISRMNLILYDPKTARSKALFEWWDEIREELWIYQIQSFNFD
        E F YHVWK++E+  W KEFV+A+P      + R++ +    Y +Q+++  EDG +LCL + + LI+YDPKT + + L +   EI+E +W +QI+SF+F+
Subjt:  ECFGYHVWKIEEEDLWIKEFVIAMP------IGRYYDVSWRPYDVQIIEALEDGKMLCLISRMNLILYDPKTARSKALFEWWDEIREELWIYQIQSFNFD

Query:  PLSKILGG
         L   L G
Subjt:  PLSKILGG

XP_022143297.1 F-box/kelch-repeat protein At3g06240-like [Momordica charantia]6.5e-2840.39Show/hide
Query:  VEVFAFGPS--SNDWKSVPFSLRLEINDDGVYLNGALFWIGCYNVELESSYKNILVCFDVEEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEMEC
        +E F FG +  S     VP S+ +E  +  VY NG+L+WIG    +      N+L   D+E+E  +EISFPQ+G        +I VF+  LYL++ +   
Subjt:  VEVFAFGPS--SNDWKSVPFSLRLEINDDGVYLNGALFWIGCYNVELESSYKNILVCFDVEEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEMEC

Query:  FGYHVWKIEEEDLWIKEFVIAMPIGRYYDVSWRPYD--VQIIEALEDGKMLCLISRMNLILYDPKTARSKALFEWWDEIREELWIYQIQSFNFDPLSKIL
          YHVWK+EE+  W K F + +P  + Y    R YD  +Q+I A +DGK+LCLIS ++LILY+ KT R ++L      I++   +++I SFNFD L KIL
Subjt:  FGYHVWKIEEEDLWIKEFVIAMPIGRYYDVSWRPYD--VQIIEALEDGKMLCLISRMNLILYDPKTARSKALFEWWDEIREELWIYQIQSFNFDPLSKIL

Query:  GGD
         GD
Subjt:  GGD

XP_038880514.1 putative F-box protein At1g46984 [Benincasa hispida]2.0e-3241.06Show/hide
Query:  VEVFAFGPSSNDWK---SVPFSLRLEINDDGVYLNGALFWIGCYNVELESSYKNILVCFDVEEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEME
        VE+FAFG +S +W    SVP+ L       GVY NG L+W+G   +   +   +++   D+E+++FK+ISFP  G D + +   I V++  LYL++   +
Subjt:  VEVFAFGPSSNDWK---SVPFSLRLEINDDGVYLNGALFWIGCYNVELESSYKNILVCFDVEEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEME

Query:  CFGYHVWKIEEEDLWIKEFVIAMP------IGRYYDVSWRPYDVQIIEALEDGKMLCLISRMNLILYDPKTARSKALFEWWDEIREELWIYQIQSFNFDP
         F YHVWK+EE+  WIKEFV+A+P      + R++ +    Y +Q+I+A EDG +LCL + + LILYDPKT  ++ L +   EI++ +W+YQI SFNF+ 
Subjt:  CFGYHVWKIEEEDLWIKEFVIAMP------IGRYYDVSWRPYDVQIIEALEDGKMLCLISRMNLILYDPKTARSKALFEWWDEIREELWIYQIQSFNFDP

Query:  LSKILGG
        L  IL G
Subjt:  LSKILGG

TrEMBL top hitse value%identityAlignment
A0A0A0M1M5 F-box domain-containing protein6.8e-3139.6Show/hide
Query:  VEVFAFGPSSNDWKSVPFSLRLEINDDGVYLNGALFWIGCYNVELE--SSYKNILVCFDVEEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEMEC
        V++FAFG +S +W  V           GVYLNG L+W+G   +     S Y  ++   D+++E+F++ISFP  G D       I V++  LYL+ F  E 
Subjt:  VEVFAFGPSSNDWKSVPFSLRLEINDDGVYLNGALFWIGCYNVELE--SSYKNILVCFDVEEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEMEC

Query:  FGYHVWKIEEEDLWIKEFVIAMPIGRYYDVSWRP--YDVQIIEALEDGKMLCLISRMNLILYDPKTARSKALFEWWDEIREELWIYQIQSFNFDPLSKIL
        F YH WK+EE+  W KEFV+A+P   ++ +   P  Y +Q+I+  EDG +LCL + + LILYDP T   + L     EI+E +W++QI+SF+F+ L  IL
Subjt:  FGYHVWKIEEEDLWIKEFVIAMPIGRYYDVSWRP--YDVQIIEALEDGKMLCLISRMNLILYDPKTARSKALFEWWDEIREELWIYQIQSFNFDPLSKIL

Query:  GG
         G
Subjt:  GG

A0A1S3BQV8 putative F-box protein At3g211201.0e-2636.06Show/hide
Query:  VEVFAFGPSSNDWKSVPFSLRLEINDDGVYLNGALFWIGCY----NVELESSYKNILVCFDVEEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEM
        V++FAFG +S +W  +           GVY NG L+W+G      N  L S Y  ++   D+ +E+FK+IS P  G +       + V++  LYL++   
Subjt:  VEVFAFGPSSNDWKSVPFSLRLEINDDGVYLNGALFWIGCY----NVELESSYKNILVCFDVEEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEM

Query:  ECFGYHVWKIEEEDLWIKEFVIAMP------IGRYYDVSWRPYDVQIIEALEDGKMLCLISRMNLILYDPKTARSKALFEWWDEIREELWIYQIQSFNFD
        E F YHVWK++E+  W KEFV+A+P      + R++ +    Y +Q+++  EDG +LCL + + LI+YDPKT + + L +   EI+E +W +QI+SF+F+
Subjt:  ECFGYHVWKIEEEDLWIKEFVIAMP------IGRYYDVSWRPYDVQIIEALEDGKMLCLISRMNLILYDPKTARSKALFEWWDEIREELWIYQIQSFNFD

Query:  PLSKILGG
         L   L G
Subjt:  PLSKILGG

A0A5D3CIX9 Putative F-box protein1.0e-2636.06Show/hide
Query:  VEVFAFGPSSNDWKSVPFSLRLEINDDGVYLNGALFWIGCY----NVELESSYKNILVCFDVEEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEM
        V++FAFG +S +W  +           GVY NG L+W+G      N  L S Y  ++   D+ +E+FK+IS P  G +       + V++  LYL++   
Subjt:  VEVFAFGPSSNDWKSVPFSLRLEINDDGVYLNGALFWIGCY----NVELESSYKNILVCFDVEEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEM

Query:  ECFGYHVWKIEEEDLWIKEFVIAMP------IGRYYDVSWRPYDVQIIEALEDGKMLCLISRMNLILYDPKTARSKALFEWWDEIREELWIYQIQSFNFD
        E F YHVWK++E+  W KEFV+A+P      + R++ +    Y +Q+++  EDG +LCL + + LI+YDPKT + + L +   EI+E +W +QI+SF+F+
Subjt:  ECFGYHVWKIEEEDLWIKEFVIAMP------IGRYYDVSWRPYDVQIIEALEDGKMLCLISRMNLILYDPKTARSKALFEWWDEIREELWIYQIQSFNFD

Query:  PLSKILGG
         L   L G
Subjt:  PLSKILGG

A0A5D3CM94 Putative F-box protein1.0e-2636.95Show/hide
Query:  VEVFAFGPSSNDWKSVPFSLRLEINDDGVYLNGALFWIGCYNVELESSYKNILVCFDVEEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEMECFG
        VE+FAFG +   W SV F   L + D GVY NG L+W+       +SS   I    D+E E  ++IS PQ             VFD  LYL++ +     
Subjt:  VEVFAFGPSSNDWKSVPFSLRLEINDDGVYLNGALFWIGCYNVELESSYKNILVCFDVEEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEMECFG

Query:  YHVWKIEEEDLWIKEFVIAMPIGRYY----DVSWRPYDVQIIEALEDGKMLCLISRMNLILYDPKTARSKALFEWWDEIREELWIYQIQSFNFDPLSKIL
        Y VWK+++   WIK FVI+ P    +       W    +  I+A EDGK+LCL++ ++LILYDPKT  ++ L +   ++ + L ++ I SFNF+ L  IL
Subjt:  YHVWKIEEEDLWIKEFVIAMPIGRYY----DVSWRPYDVQIIEALEDGKMLCLISRMNLILYDPKTARSKALFEWWDEIREELWIYQIQSFNFDPLSKIL

Query:  GGD
         G+
Subjt:  GGD

A0A6J1CQE2 F-box/kelch-repeat protein At3g06240-like3.2e-2840.39Show/hide
Query:  VEVFAFGPS--SNDWKSVPFSLRLEINDDGVYLNGALFWIGCYNVELESSYKNILVCFDVEEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEMEC
        +E F FG +  S     VP S+ +E  +  VY NG+L+WIG    +      N+L   D+E+E  +EISFPQ+G        +I VF+  LYL++ +   
Subjt:  VEVFAFGPS--SNDWKSVPFSLRLEINDDGVYLNGALFWIGCYNVELESSYKNILVCFDVEEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEMEC

Query:  FGYHVWKIEEEDLWIKEFVIAMPIGRYYDVSWRPYD--VQIIEALEDGKMLCLISRMNLILYDPKTARSKALFEWWDEIREELWIYQIQSFNFDPLSKIL
          YHVWK+EE+  W K F + +P  + Y    R YD  +Q+I A +DGK+LCLIS ++LILY+ KT R ++L      I++   +++I SFNFD L KIL
Subjt:  FGYHVWKIEEEDLWIKEFVIAMPIGRYYDVSWRPYD--VQIIEALEDGKMLCLISRMNLILYDPKTARSKALFEWWDEIREELWIYQIQSFNFDPLSKIL

Query:  GGD
         GD
Subjt:  GGD

SwissProt top hitse value%identityAlignment
Q1KS79 F-box protein At2g231608.1e-0531.82Show/hide
Query:  EVFAFGPSSNDWKSVPFSLRLEINDDGVYLNGALFWIG----CYNVELESSYKNILVCFDVEEERF
        ++   G  +  W+++  SLR EI  +GV +NG L+++G      N + +  Y   +VCFD+  E+F
Subjt:  EVFAFGPSSNDWKSVPFSLRLEINDDGVYLNGALFWIG----CYNVELESSYKNILVCFDVEEERF

Arabidopsis top hitse value%identityAlignment
AT1G47340.1 F-box and associated interaction domains-containing protein1.8e-0431.25Show/hide
Query:  VFAFGPSSNDWKSVPFSLRLEINDDGVYLNGALFWIGCYNVELESSYKNILVCFDVEEERFKEI
        V  FG     W+ +  S++ +I  DG+ +NG ++++G  + E  +++  ++VCFDV  E F  I
Subjt:  VFAFGPSSNDWKSVPFSLRLEINDDGVYLNGALFWIGCYNVELESSYKNILVCFDVEEERFKEI

AT1G47350.1 F-box associated ubiquitination effector family protein9.2e-0432.26Show/hide
Query:  EVFAFGPSSNDWKSVPFSLRLEINDDGVYLNGALFWIGCYNVELESSYKNILVCFDVEEERF
        +V   G     W+ +  +LR EI  +G+ +NG ++++G  +  L S    ++VCFDV  E F
Subjt:  EVFAFGPSSNDWKSVPFSLRLEINDDGVYLNGALFWIGCYNVELESSYKNILVCFDVEEERF

AT2G16450.1 F-box and associated interaction domains-containing protein1.1e-0433.82Show/hide
Query:  VFAFGPSSNDWKSVPFSLRLEINDDGVYLNGALFWIG-------CYNVELESSYKNILVCFDVEEERF
        V  FG     W+ +  SLR +I  +GV +NG L+++G            + S Y  ++VCFDV  E+F
Subjt:  VFAFGPSSNDWKSVPFSLRLEINDDGVYLNGALFWIG-------CYNVELESSYKNILVCFDVEEERF

AT2G23160.1 F-box family protein5.7e-0631.82Show/hide
Query:  EVFAFGPSSNDWKSVPFSLRLEINDDGVYLNGALFWIG----CYNVELESSYKNILVCFDVEEERF
        ++   G  +  W+++  SLR EI  +GV +NG L+++G      N + +  Y   +VCFD+  E+F
Subjt:  EVFAFGPSSNDWKSVPFSLRLEINDDGVYLNGALFWIG----CYNVELESSYKNILVCFDVEEERF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCATTTAATACGGTAGTAGAGGAAGTGGAGGTTTTCGCATTTGGCCCGAGTTCGAACGATTGGAAGAGTGTTCCCTTCTCGCTGCGTCTCGAGATCAACGACGATGG
TGTTTACTTGAATGGAGCCCTTTTCTGGATTGGATGTTATAATGTAGAACTGGAATCCAGTTATAAGAACATCCTCGTATGTTTCGACGTGGAAGAGGAGAGATTCAAGG
AAATTTCTTTTCCCCAAGCTGGGAAAGATGGGAAGAGAAATTCTTTAGCCATTAGGGTTTTTGATAGCCATCTCTATCTCTCTATCTTTGAGATGGAATGTTTTGGATAC
CATGTGTGGAAGATAGAAGAAGAAGATTTGTGGATTAAGGAATTTGTTATTGCAATGCCAATTGGTCGTTATTATGATGTGTCTTGGAGGCCTTATGATGTGCAAATCAT
CGAAGCTTTGGAAGATGGGAAGATGTTGTGTCTGATTTCGAGAATGAATTTAATCTTGTACGATCCGAAGACTGCGAGGTCAAAGGCATTGTTTGAATGGTGGGATGAAA
TTAGGGAAGAATTGTGGATTTATCAAATTCAATCGTTCAATTTTGATCCTCTCTCCAAGATTCTCGGAGGAGATGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCATTTAATACGGTAGTAGAGGAAGTGGAGGTTTTCGCATTTGGCCCGAGTTCGAACGATTGGAAGAGTGTTCCCTTCTCGCTGCGTCTCGAGATCAACGACGATGG
TGTTTACTTGAATGGAGCCCTTTTCTGGATTGGATGTTATAATGTAGAACTGGAATCCAGTTATAAGAACATCCTCGTATGTTTCGACGTGGAAGAGGAGAGATTCAAGG
AAATTTCTTTTCCCCAAGCTGGGAAAGATGGGAAGAGAAATTCTTTAGCCATTAGGGTTTTTGATAGCCATCTCTATCTCTCTATCTTTGAGATGGAATGTTTTGGATAC
CATGTGTGGAAGATAGAAGAAGAAGATTTGTGGATTAAGGAATTTGTTATTGCAATGCCAATTGGTCGTTATTATGATGTGTCTTGGAGGCCTTATGATGTGCAAATCAT
CGAAGCTTTGGAAGATGGGAAGATGTTGTGTCTGATTTCGAGAATGAATTTAATCTTGTACGATCCGAAGACTGCGAGGTCAAAGGCATTGTTTGAATGGTGGGATGAAA
TTAGGGAAGAATTGTGGATTTATCAAATTCAATCGTTCAATTTTGATCCTCTCTCCAAGATTCTCGGAGGAGATGTTTGA
Protein sequenceShow/hide protein sequence
MPFNTVVEEVEVFAFGPSSNDWKSVPFSLRLEINDDGVYLNGALFWIGCYNVELESSYKNILVCFDVEEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEMECFGY
HVWKIEEEDLWIKEFVIAMPIGRYYDVSWRPYDVQIIEALEDGKMLCLISRMNLILYDPKTARSKALFEWWDEIREELWIYQIQSFNFDPLSKILGGDV