; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg002039 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg002039
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein FAR1-RELATED SEQUENCE 4-like
Genome locationscaffold10:3986448..3990408
RNA-Seq ExpressionSpg002039
SyntenySpg002039
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR007527 - Zinc finger, SWIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022145141.1 uncharacterized protein LOC111014656 [Momordica charantia]1.2e-3743.88Show/hide
Query:  MVFQVVSNLSPLFGSQRWKELPKNGI-----GWLQDLYYERRIYVANRGTQFSDYAETIISATKENARRHVVRPVDSYEFDVDDGSLGGRVNIHTRTCSC
        M   +V +++ LF   R  +LP   +     G LQ  +YERR   ++R +  SDYAE +I+   +NARRH+V  +D + F+V DG+L   V++ T+TC+ 
Subjt:  MVFQVVSNLSPLFGSQRWKELPKNGI-----GWLQDLYYERRIYVANRGTQFSDYAETIISATKENARRHVVRPVDSYEFDVDDGSLGGRVNIHTRTCSC

Query:  RDFDYFELPCSHAITVGFYALKLVDRGTVLRFVW-VESWLNSYAEPIRPLGHVTEWKRSSNFVDVDVLPPKQVSRVGQRRTVIIPSVGEVRQVHKC
        R+FDYF++PCSHAI V   + + ++  T+    + V SW+ +YAEPI P+G  + WK S  FV++DV PPK+V RVG+R+TV IPS GEVR   KC
Subjt:  RDFDYFELPCSHAITVGFYALKLVDRGTVLRFVW-VESWLNSYAEPIRPLGHVTEWKRSSNFVDVDVLPPKQVSRVGQRRTVIIPSVGEVRQVHKC

XP_022145820.1 uncharacterized protein LOC111015181 [Momordica charantia]2.1e-3740.38Show/hide
Query:  MVFQVVSNLSPLFGSQRWKELPKNGI-----GWLQDLYYERRIYVANRGTQFSDYAETIISATKENARRHVVRPVDSYEFDVDDGSLGGRVNIHTRTCSC
        M   +  +++ LF   R  +LP   +     G LQ+ +Y+RR   A+R T  SDYAE + +    + RRHVV  +D + F V D +L G V+++  TC+C
Subjt:  MVFQVVSNLSPLFGSQRWKELPKNGI-----GWLQDLYYERRIYVANRGTQFSDYAETIISATKENARRHVVRPVDSYEFDVDDGSLGGRVNIHTRTCSC

Query:  RDFDYFELPCSHAITVGFYALKLVDRGTVLRFVW-VESWLNSYAEPIRPLGHVTEWKRSSNFVDVDVLPPKQVSRVGQRRTVIIPSVGEVRQVHKC-ECE
        R+FDYF++PCSHAI      ++ ++  ++    +   SW+ +YAEPI P+GHV+ W  S  FV++ V PPK V RVG+R+T  IPS GEVRQ  KC  C 
Subjt:  RDFDYFELPCSHAITVGFYALKLVDRGTVLRFVW-VESWLNSYAEPIRPLGHVTEWKRSSNFVDVDVLPPKQVSRVGQRRTVIIPSVGEVRQVHKC-ECE

Query:  KWSNGAEM
         W     M
Subjt:  KWSNGAEM

XP_022146373.1 uncharacterized protein LOC111015601 [Momordica charantia]6.2e-3747.34Show/hide
Query:  IGWLQDLYYERRIYVANRGTQFSDYAETIISATKENARRHVVRPVDSYEFDVDDGSLGGRVNIHTRTCSCRDFDYFELPCSHAITV----GFYALKLVDR
        IG LQ+ +Y+RR   A+R T  SDYAE + +   ++ARRHVV  +D + F V D +L G V+++  TCSCR+FDYF++PCSHAI            L D 
Subjt:  IGWLQDLYYERRIYVANRGTQFSDYAETIISATKENARRHVVRPVDSYEFDVDDGSLGGRVNIHTRTCSCRDFDYFELPCSHAITV----GFYALKLVDR

Query:  GTVLRFVWVESWLNSYAEPIRPLGHVTEWKRSSNFVDVDVLPPKQVSRVGQRRTVIIPSVGEVRQVHKC
             F     W+ +YAEPI P+GHV+ W  S  FV++ V PPK V RVG+R+T  IPS GEVRQ  KC
Subjt:  GTVLRFVWVESWLNSYAEPIRPLGHVTEWKRSSNFVDVDVLPPKQVSRVGQRRTVIIPSVGEVRQVHKC

XP_022154610.1 uncharacterized protein LOC111021833 [Momordica charantia]1.8e-3643.33Show/hide
Query:  GWLQDLYYERRIYVANRGTQFSDYAETIISATKENARRHVVRPVDSYEFDVDDGSLGGRVNIHTRTCSCRDFDYFELPCSHAITVGFYALKLVDRGTVLR
        G L + +Y+RR   A+R T  SDYAE + +   ++ARRHVV  +D + F V DG+  G V+++  TCSCR+FDYF++PCSH I      ++ ++  ++  
Subjt:  GWLQDLYYERRIYVANRGTQFSDYAETIISATKENARRHVVRPVDSYEFDVDDGSLGGRVNIHTRTCSCRDFDYFELPCSHAITVGFYALKLVDRGTVLR

Query:  FVW-VESWLNSYAEPIRPLGHVTEWKRSSNFVDVDVLPPKQVSRVGQRRTVIIPSVGEVRQVHKC-ECEKWSNGAEMTEE
          +   SW+ +YAEPI P+GHV+ W  S  FV++ V PPK V RVG+R T  IPS GEVRQ  KC  C  W +  +   E
Subjt:  FVW-VESWLNSYAEPIRPLGHVTEWKRSSNFVDVDVLPPKQVSRVGQRRTVIIPSVGEVRQVHKC-ECEKWSNGAEMTEE

XP_022159268.1 uncharacterized protein LOC111025678 [Momordica charantia]4.3e-3841.46Show/hide
Query:  SNLSPLFGSQRWKELPKNGI-----GWLQDLYYERRIYVANRGTQFSDYAETIISATKENARRHVVRPVDSYEFDVDDGSLGGRVNIHTRTCSCRDFDYF
        S+++ LF  +  ++LP   +     G LQ  +Y+RR   A+R T  SDYAE + +   ++ARRHVV  +D + F V DG+L G V+++   CSCR+FDYF
Subjt:  SNLSPLFGSQRWKELPKNGI-----GWLQDLYYERRIYVANRGTQFSDYAETIISATKENARRHVVRPVDSYEFDVDDGSLGGRVNIHTRTCSCRDFDYF

Query:  ELPCSHAITVGFYALKLVDRGTVLRFVW-VESWLNSYAEPIRPLGHVTEWKRSSNFVDVDVLPPKQVSRVGQRRTVIIPSVGEVRQVHKC-ECEKWSNGA
        ++PCSHAI      ++ ++  ++    +   SW+ +YAEPI P+GH++ W  S  FV++ V PPK V RVG+R+TV IPS GEVRQ  KC  C  W +  
Subjt:  ELPCSHAITVGFYALKLVDRGTVLRFVW-VESWLNSYAEPIRPLGHVTEWKRSSNFVDVDVLPPKQVSRVGQRRTVIIPSVGEVRQVHKC-ECEKWSNGA

Query:  EMTEE
        +   E
Subjt:  EMTEE

TrEMBL top hitse value%identityAlignment
A0A6J1CVG8 uncharacterized protein LOC1110146566.0e-3843.88Show/hide
Query:  MVFQVVSNLSPLFGSQRWKELPKNGI-----GWLQDLYYERRIYVANRGTQFSDYAETIISATKENARRHVVRPVDSYEFDVDDGSLGGRVNIHTRTCSC
        M   +V +++ LF   R  +LP   +     G LQ  +YERR   ++R +  SDYAE +I+   +NARRH+V  +D + F+V DG+L   V++ T+TC+ 
Subjt:  MVFQVVSNLSPLFGSQRWKELPKNGI-----GWLQDLYYERRIYVANRGTQFSDYAETIISATKENARRHVVRPVDSYEFDVDDGSLGGRVNIHTRTCSC

Query:  RDFDYFELPCSHAITVGFYALKLVDRGTVLRFVW-VESWLNSYAEPIRPLGHVTEWKRSSNFVDVDVLPPKQVSRVGQRRTVIIPSVGEVRQVHKC
        R+FDYF++PCSHAI V   + + ++  T+    + V SW+ +YAEPI P+G  + WK S  FV++DV PPK+V RVG+R+TV IPS GEVR   KC
Subjt:  RDFDYFELPCSHAITVGFYALKLVDRGTVLRFVW-VESWLNSYAEPIRPLGHVTEWKRSSNFVDVDVLPPKQVSRVGQRRTVIIPSVGEVRQVHKC

A0A6J1CVL4 uncharacterized protein LOC1110151811.0e-3740.38Show/hide
Query:  MVFQVVSNLSPLFGSQRWKELPKNGI-----GWLQDLYYERRIYVANRGTQFSDYAETIISATKENARRHVVRPVDSYEFDVDDGSLGGRVNIHTRTCSC
        M   +  +++ LF   R  +LP   +     G LQ+ +Y+RR   A+R T  SDYAE + +    + RRHVV  +D + F V D +L G V+++  TC+C
Subjt:  MVFQVVSNLSPLFGSQRWKELPKNGI-----GWLQDLYYERRIYVANRGTQFSDYAETIISATKENARRHVVRPVDSYEFDVDDGSLGGRVNIHTRTCSC

Query:  RDFDYFELPCSHAITVGFYALKLVDRGTVLRFVW-VESWLNSYAEPIRPLGHVTEWKRSSNFVDVDVLPPKQVSRVGQRRTVIIPSVGEVRQVHKC-ECE
        R+FDYF++PCSHAI      ++ ++  ++    +   SW+ +YAEPI P+GHV+ W  S  FV++ V PPK V RVG+R+T  IPS GEVRQ  KC  C 
Subjt:  RDFDYFELPCSHAITVGFYALKLVDRGTVLRFVW-VESWLNSYAEPIRPLGHVTEWKRSSNFVDVDVLPPKQVSRVGQRRTVIIPSVGEVRQVHKC-ECE

Query:  KWSNGAEM
         W     M
Subjt:  KWSNGAEM

A0A6J1CYE7 uncharacterized protein LOC1110156013.0e-3747.34Show/hide
Query:  IGWLQDLYYERRIYVANRGTQFSDYAETIISATKENARRHVVRPVDSYEFDVDDGSLGGRVNIHTRTCSCRDFDYFELPCSHAITV----GFYALKLVDR
        IG LQ+ +Y+RR   A+R T  SDYAE + +   ++ARRHVV  +D + F V D +L G V+++  TCSCR+FDYF++PCSHAI            L D 
Subjt:  IGWLQDLYYERRIYVANRGTQFSDYAETIISATKENARRHVVRPVDSYEFDVDDGSLGGRVNIHTRTCSCRDFDYFELPCSHAITV----GFYALKLVDR

Query:  GTVLRFVWVESWLNSYAEPIRPLGHVTEWKRSSNFVDVDVLPPKQVSRVGQRRTVIIPSVGEVRQVHKC
             F     W+ +YAEPI P+GHV+ W  S  FV++ V PPK V RVG+R+T  IPS GEVRQ  KC
Subjt:  GTVLRFVWVESWLNSYAEPIRPLGHVTEWKRSSNFVDVDVLPPKQVSRVGQRRTVIIPSVGEVRQVHKC

A0A6J1DK35 uncharacterized protein LOC1110218338.7e-3743.33Show/hide
Query:  GWLQDLYYERRIYVANRGTQFSDYAETIISATKENARRHVVRPVDSYEFDVDDGSLGGRVNIHTRTCSCRDFDYFELPCSHAITVGFYALKLVDRGTVLR
        G L + +Y+RR   A+R T  SDYAE + +   ++ARRHVV  +D + F V DG+  G V+++  TCSCR+FDYF++PCSH I      ++ ++  ++  
Subjt:  GWLQDLYYERRIYVANRGTQFSDYAETIISATKENARRHVVRPVDSYEFDVDDGSLGGRVNIHTRTCSCRDFDYFELPCSHAITVGFYALKLVDRGTVLR

Query:  FVW-VESWLNSYAEPIRPLGHVTEWKRSSNFVDVDVLPPKQVSRVGQRRTVIIPSVGEVRQVHKC-ECEKWSNGAEMTEE
          +   SW+ +YAEPI P+GHV+ W  S  FV++ V PPK V RVG+R T  IPS GEVRQ  KC  C  W +  +   E
Subjt:  FVW-VESWLNSYAEPIRPLGHVTEWKRSSNFVDVDVLPPKQVSRVGQRRTVIIPSVGEVRQVHKC-ECEKWSNGAEMTEE

A0A6J1DYC4 uncharacterized protein LOC1110256782.1e-3841.46Show/hide
Query:  SNLSPLFGSQRWKELPKNGI-----GWLQDLYYERRIYVANRGTQFSDYAETIISATKENARRHVVRPVDSYEFDVDDGSLGGRVNIHTRTCSCRDFDYF
        S+++ LF  +  ++LP   +     G LQ  +Y+RR   A+R T  SDYAE + +   ++ARRHVV  +D + F V DG+L G V+++   CSCR+FDYF
Subjt:  SNLSPLFGSQRWKELPKNGI-----GWLQDLYYERRIYVANRGTQFSDYAETIISATKENARRHVVRPVDSYEFDVDDGSLGGRVNIHTRTCSCRDFDYF

Query:  ELPCSHAITVGFYALKLVDRGTVLRFVW-VESWLNSYAEPIRPLGHVTEWKRSSNFVDVDVLPPKQVSRVGQRRTVIIPSVGEVRQVHKC-ECEKWSNGA
        ++PCSHAI      ++ ++  ++    +   SW+ +YAEPI P+GH++ W  S  FV++ V PPK V RVG+R+TV IPS GEVRQ  KC  C  W +  
Subjt:  ELPCSHAITVGFYALKLVDRGTVLRFVW-VESWLNSYAEPIRPLGHVTEWKRSSNFVDVDVLPPKQVSRVGQRRTVIIPSVGEVRQVHKC-ECEKWSNGA

Query:  EMTEE
        +   E
Subjt:  EMTEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G64260.1 MuDR family transposase3.5e-0625.2Show/hide
Query:  NRGTQFSDYAETIISATKENARRHVVRPVDSYEFDVDDGSLGGR--VNIHTRTCSCRDFDYFELPCSHAITVGFYALKLVDRGTVLRFVWVESWLNSYAE
        NRG  +++     +     ++  +V+  ++   F V + S      V ++  TC+CR F  ++ PC HA+ V F  LK+     V     VE +  +YA 
Subjt:  NRGTQFSDYAETIISATKENARRHVVRPVDSYEFDVDDGSLGGR--VNIHTRTCSCRDFDYFELPCSHAITVGFYALKLVDRGTVLRFVWVESWLNSYAE

Query:  PIRPLGHVTEWKRSSNFVDVDVLPPKQ
           P+  V  W          + PP Q
Subjt:  PIRPLGHVTEWKRSSNFVDVDVLPPKQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGTCTTCCAGGTGGTCTCCAATCTCTCTCCTCTATTCGGCTCCCAAAGGTGGAAGGAACTTCCCAAGAATGGAATAGGTTGGCTCCAGGACTTGTATTACGAGCG
TCGAATTTACGTAGCCAATCGAGGAACACAATTTTCAGACTATGCAGAGACGATAATCAGTGCAACCAAAGAGAACGCGAGGAGACATGTAGTTAGACCGGTTGATAGTT
ATGAGTTCGATGTAGACGATGGGTCATTGGGTGGACGTGTCAACATACACACTAGGACATGCAGTTGTCGTGACTTTGACTACTTCGAACTCCCATGTTCCCATGCGATT
ACTGTTGGGTTTTATGCCCTAAAACTCGTAGATAGAGGGACTGTCCTTAGATTTGTATGGGTGGAATCTTGGTTGAATTCTTATGCAGAGCCCATACGACCACTTGGCCA
TGTGACAGAGTGGAAGCGATCATCGAACTTTGTTGATGTTGATGTCTTGCCTCCTAAACAAGTTTCTCGAGTAGGTCAACGCCGAACTGTTATAATACCTTCTGTAGGAG
AAGTACGCCAAGTCCACAAGTGTGAATGTGAAAAGTGGAGTAATGGAGCTGAGATGACCGAAGAAGAAGCTATGGCTGATGTTGGGTTTCCAGAGTGGGTGAAAATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGATGGTCTTCCAGGTGGTCTCCAATCTCTCTCCTCTATTCGGCTCCCAAAGGTGGAAGGAACTTCCCAAGAATGGAATAGGTTGGCTCCAGGACTTGTATTACGAGCG
TCGAATTTACGTAGCCAATCGAGGAACACAATTTTCAGACTATGCAGAGACGATAATCAGTGCAACCAAAGAGAACGCGAGGAGACATGTAGTTAGACCGGTTGATAGTT
ATGAGTTCGATGTAGACGATGGGTCATTGGGTGGACGTGTCAACATACACACTAGGACATGCAGTTGTCGTGACTTTGACTACTTCGAACTCCCATGTTCCCATGCGATT
ACTGTTGGGTTTTATGCCCTAAAACTCGTAGATAGAGGGACTGTCCTTAGATTTGTATGGGTGGAATCTTGGTTGAATTCTTATGCAGAGCCCATACGACCACTTGGCCA
TGTGACAGAGTGGAAGCGATCATCGAACTTTGTTGATGTTGATGTCTTGCCTCCTAAACAAGTTTCTCGAGTAGGTCAACGCCGAACTGTTATAATACCTTCTGTAGGAG
AAGTACGCCAAGTCCACAAGTGTGAATGTGAAAAGTGGAGTAATGGAGCTGAGATGACCGAAGAAGAAGCTATGGCTGATGTTGGGTTTCCAGAGTGGGTGAAAATGTAG
Protein sequenceShow/hide protein sequence
MMVFQVVSNLSPLFGSQRWKELPKNGIGWLQDLYYERRIYVANRGTQFSDYAETIISATKENARRHVVRPVDSYEFDVDDGSLGGRVNIHTRTCSCRDFDYFELPCSHAI
TVGFYALKLVDRGTVLRFVWVESWLNSYAEPIRPLGHVTEWKRSSNFVDVDVLPPKQVSRVGQRRTVIIPSVGEVRQVHKCECEKWSNGAEMTEEEAMADVGFPEWVKM