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Spg002064 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg002064
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold2:26152339..26156466
RNA-Seq ExpressionSpg002064
SyntenySpg002064
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]1.6e-1150Show/hide
Query:  FIKQRLLPTTHDSTVSRERVLLAFAILRSLSINVGKIIASEISGCWKKKVGKLFFPNTITMLCK--RAGVLENEGDVILFDKGIIDTPNLARLQRTQE
        F+K  LLPTTH  TVS++R+LL  ++L   SINVG++I SEI  C  +K G LFFP+ IT LC+  RA  L NE    L + G ID   +AR+  TQE
Subjt:  FIKQRLLPTTHDSTVSRERVLLAFAILRSLSINVGKIIASEISGCWKKKVGKLFFPNTITMLCK--RAGVLENEGDVILFDKGIIDTPNLARLQRTQE

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.0e-1837.78Show/hide
Query:  FIKQRLLPTTHDSTVSRERVLLAFAILRSLSINVGKIIASEISGCWKKKVGKLFFPNTITMLCK--RAGVLENEGDVILFDKGIIDTPNLARLQR---TQ
        F+K RLLPTTH  TVS++R+LL  ++L   SINVG++I SEI  C  +K G LFFP+ IT LC+  RA  L NE    L + G ID   +AR+ +   T+
Subjt:  FIKQRLLPTTHDSTVSRERVLLAFAILRSLSINVGKIIASEISGCWKKKVGKLFFPNTITMLCK--RAGVLENEGDVILFDKGIIDTPNLARLQR---TQ

Query:  EARQ---------------GGLVYGINTILEQLALSASRQ-------EFAERQALTFWNYVKSRDANLKKALQENFSKPL
          +Q               G ++  +  + ++L+    +Q       +   +Q   FW Y K RD  LKKALQ NF++P+
Subjt:  EARQ---------------GGLVYGINTILEQLALSASRQ-------EFAERQALTFWNYVKSRDANLKKALQENFSKPL

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]1.4e-1837.91Show/hide
Query:  FIKQRLLPTTHDSTVSRERVLLAFAILRSLSINVGKIIASEISGCWKKKVGKLFFPNTITMLCK--RAGVLENEGDVILFDKGIIDTPNLARLQRTQEAR
        F+K RLLPTTH  TVS++R+LL +++L   SINVG++I SEI  C  +K G LFFP+ IT LC+  RA  L NE    L   G ID   +AR+  TQE +
Subjt:  FIKQRLLPTTHDSTVSRERVLLAFAILRSLSINVGKIIASEISGCWKKKVGKLFFPNTITMLCK--RAGVLENEGDVILFDKGIIDTPNLARLQRTQEAR

Query:  --------------------QGGLVYGINTILEQLALSASRQ-------EFAERQALTFWNYVKSRDANLKKALQENFSKPL
                             G ++  +  + ++L+    +Q       +   +Q   FW Y K RD  LKKALQ NF++P+
Subjt:  --------------------QGGLVYGINTILEQLALSASRQ-------EFAERQALTFWNYVKSRDANLKKALQENFSKPL

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]6.5e-2142.35Show/hide
Query:  FIKQRLLPTTHDSTVSRERVLLAFAILRSLSINVGKIIASEISGCWKKKVGKLFFPNTITMLCKRAGVLENEGDVILFDKGIIDTPNLARL------QRT
        F+K RLLPTTH   VS++R+LL  ++L   SINVG++I SEI  C  +K G LFFP+ IT LC+ A  L NE    L + G ID   +AR+      + T
Subjt:  FIKQRLLPTTHDSTVSRERVLLAFAILRSLSINVGKIIASEISGCWKKKVGKLFFPNTITMLCKRAGVLENEGDVILFDKGIIDTPNLARL------QRT

Query:  QE-----------ARQGGLVYGINTILEQLALSASRQEFAERQALTFWNYVKSRDANLKKALQENFSKPL
        Q+           +R  G V      LEQ     S+QE   +Q   FW Y K RD  LKKALQ NF++P+
Subjt:  QE-----------ARQGGLVYGINTILEQLALSASRQEFAERQALTFWNYVKSRDANLKKALQENFSKPL

XP_024971944.1 uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus]4.2e-1232.91Show/hide
Query:  MRFIKQRLLPTTHDSTVSRERVLLAFAILRSLSINVGKIIASEISGCWKKKVGKLFFPNTITMLCKRAGVLENEGDVIL---FDKGIIDTPNLARL-QRT
        + FI+  L PTTHDS++S E+++L + ++   +INVGK++   I  C K++ GKLFFP+ I  L  +AGV E   D+++    +K  ID   +++L +R+
Subjt:  MRFIKQRLLPTTHDSTVSRERVLLAFAILRSLSINVGKIIASEISGCWKKKVGKLFFPNTITMLCKRAGVLENEGDVIL---FDKGIIDTPNLARL-QRT

Query:  QEARQ-GGLVYGINTILEQLALSASRQEFAERQALTFWNYVKSRDANLKKALQENFSK
        +  R+  G+   +  +LEQ   S S  +F   Q       +K+  A+L   L+ +  K
Subjt:  QEARQ-GGLVYGINTILEQLALSASRQEFAERQALTFWNYVKSRDANLKKALQENFSK

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)7.8e-1250Show/hide
Query:  FIKQRLLPTTHDSTVSRERVLLAFAILRSLSINVGKIIASEISGCWKKKVGKLFFPNTITMLCK--RAGVLENEGDVILFDKGIIDTPNLARLQRTQE
        F+K  LLPTTH  TVS++R+LL  ++L   SINVG++I SEI  C  +K G LFFP+ IT LC+  RA  L NE    L + G ID   +AR+  TQE
Subjt:  FIKQRLLPTTHDSTVSRERVLLAFAILRSLSINVGKIIASEISGCWKKKVGKLFFPNTITMLCK--RAGVLENEGDVILFDKGIIDTPNLARLQRTQE

A0A2P5BCG4 Uncharacterized protein (Fragment)5.0e-1937.78Show/hide
Query:  FIKQRLLPTTHDSTVSRERVLLAFAILRSLSINVGKIIASEISGCWKKKVGKLFFPNTITMLCK--RAGVLENEGDVILFDKGIIDTPNLARLQR---TQ
        F+K RLLPTTH  TVS++R+LL  ++L   SINVG++I SEI  C  +K G LFFP+ IT LC+  RA  L NE    L + G ID   +AR+ +   T+
Subjt:  FIKQRLLPTTHDSTVSRERVLLAFAILRSLSINVGKIIASEISGCWKKKVGKLFFPNTITMLCK--RAGVLENEGDVILFDKGIIDTPNLARLQR---TQ

Query:  EARQ---------------GGLVYGINTILEQLALSASRQ-------EFAERQALTFWNYVKSRDANLKKALQENFSKPL
          +Q               G ++  +  + ++L+    +Q       +   +Q   FW Y K RD  LKKALQ NF++P+
Subjt:  EARQ---------------GGLVYGINTILEQLALSASRQ-------EFAERQALTFWNYVKSRDANLKKALQENFSKPL

A0A2P5CEY2 Uncharacterized protein6.6e-1937.91Show/hide
Query:  FIKQRLLPTTHDSTVSRERVLLAFAILRSLSINVGKIIASEISGCWKKKVGKLFFPNTITMLCK--RAGVLENEGDVILFDKGIIDTPNLARLQRTQEAR
        F+K RLLPTTH  TVS++R+LL +++L   SINVG++I SEI  C  +K G LFFP+ IT LC+  RA  L NE    L   G ID   +AR+  TQE +
Subjt:  FIKQRLLPTTHDSTVSRERVLLAFAILRSLSINVGKIIASEISGCWKKKVGKLFFPNTITMLCK--RAGVLENEGDVILFDKGIIDTPNLARLQRTQEAR

Query:  --------------------QGGLVYGINTILEQLALSASRQ-------EFAERQALTFWNYVKSRDANLKKALQENFSKPL
                             G ++  +  + ++L+    +Q       +   +Q   FW Y K RD  LKKALQ NF++P+
Subjt:  --------------------QGGLVYGINTILEQLALSASRQ-------EFAERQALTFWNYVKSRDANLKKALQENFSKPL

A0A2P5DXM3 Uncharacterized protein3.2e-2142.35Show/hide
Query:  FIKQRLLPTTHDSTVSRERVLLAFAILRSLSINVGKIIASEISGCWKKKVGKLFFPNTITMLCKRAGVLENEGDVILFDKGIIDTPNLARL------QRT
        F+K RLLPTTH   VS++R+LL  ++L   SINVG++I SEI  C  +K G LFFP+ IT LC+ A  L NE    L + G ID   +AR+      + T
Subjt:  FIKQRLLPTTHDSTVSRERVLLAFAILRSLSINVGKIIASEISGCWKKKVGKLFFPNTITMLCKRAGVLENEGDVILFDKGIIDTPNLARL------QRT

Query:  QE-----------ARQGGLVYGINTILEQLALSASRQEFAERQALTFWNYVKSRDANLKKALQENFSKPL
        Q+           +R  G V      LEQ     S+QE   +Q   FW Y K RD  LKKALQ NF++P+
Subjt:  QE-----------ARQGGLVYGINTILEQLALSASRQEFAERQALTFWNYVKSRDANLKKALQENFSKPL

A0A7J6FZ22 Uncharacterized protein1.0e-1135.1Show/hide
Query:  FIKQRLLPTTHDSTVSRERVLLAFAILRSLSINVGKIIASEISGCWKKKVGKLFFPNTITMLCKRAGV-LENEGDVILFDKGIID-TPNLARLQRTQEAR
        F++  LLPT+HDSTVSRER+ + + I++   INVGK+IA EI  C  +  GKLFF   IT  C+ A V + N+ D +   KG++   P+ A  + T    
Subjt:  FIKQRLLPTTHDSTVSRERVLLAFAILRSLSINVGKIIASEISGCWKKKVGKLFFPNTITMLCKRAGV-LENEGDVILFDKGIID-TPNLARLQRTQEAR

Query:  QGGLVYGINTILEQLALSASRQEFAERQALTFWNYVKSRDANLKKALQENF
                + + E+L+   + Q+    +  T WNY + RD  + + L+ N+
Subjt:  QGGLVYGINTILEQLALSASRQEFAERQALTFWNYVKSRDANLKKALQENF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGATTTATCAAACAAAGGTTGCTTCCAACGACTCATGACTCGACGGTTTCTAGGGAACGTGTTCTTCTGGCTTTCGCGATTTTGAGATCTCTAAGCATTAATGTAGG
GAAGATTATTGCTAGTGAAATATCTGGATGTTGGAAGAAGAAAGTGGGGAAGTTGTTTTTCCCGAATACCATTACCATGCTTTGCAAGCGAGCAGGGGTTCTAGAGAATG
AAGGAGATGTTATTTTATTTGACAAGGGAATCATCGATACACCTAACTTGGCACGGCTTCAGCGTACGCAAGAGGCACGTCAGGGTGGGCTTGTCTACGGCATCAACACG
ATCTTAGAACAACTCGCACTTTCGGCCAGCAGGCAGGAGTTTGCCGAGAGGCAAGCTTTAACCTTCTGGAACTATGTTAAAAGTCGTGATGCCAATCTGAAGAAGGCACT
GCAGGAGAATTTTTCCAAACCCTTGGACTGGTTAAGCTTAATTAGGTCAAGAGCTAAGCTGTTGCAAGTTCTTAGAATTGAGTTAAAAGTGGTGATTATTTGTCCATGTC
GGAAGAATTATTTTGCTGCAGCAGAGCTTGGTTTTGCAGAATGCTCAGAATATGTTGTTGGGCGACTTGAGGGAGCAAATTCTGTGCTGCAGCAAAGCTGGGAGCAAAAA
CTGCCACGTCACAGCTCCCGAATAGAGGAGAGATTGGAGACCATCAAGAAGACCATCAATTGCAAGCTGATCAAGGGAATTAATACTTTCTTGCGTTATTTTGTAATTAT
GGATATGCTTACTCAGATTGTAACGTGGTACTTGAGGGCGTTGGCGATTGACGAGGCCTATGGCTTGATTGGCTATGGGACGACAGCTGCAATCTGGAAGAACCTTCTCG
GATTTGATGGACATCTTGAAAGCAATTTCGACACATCCACGGTACTAATTCGTTTCTACGCCGGTTGCTCCCCAAGGTTAATTGAGCTTAGGCTATGTCGGGAGCTGATC
ACGCTAATTGGTGTTAATTCGGGCCAATTACGGAGTTTTGGAGCCATCTCGATGTCTTGCCAGGAGGTGAAGAGACCCAATTGTGCTGAAGCGGGCCTGAATTATGACAC
CAAAAAGCCAAACATTGAAGCCCCAAATCGAGAAGAAGCGAGACAAAGCCGAGACATAAAGCAGGAAGTCGAGATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGATTTATCAAACAAAGGTTGCTTCCAACGACTCATGACTCGACGGTTTCTAGGGAACGTGTTCTTCTGGCTTTCGCGATTTTGAGATCTCTAAGCATTAATGTAGG
GAAGATTATTGCTAGTGAAATATCTGGATGTTGGAAGAAGAAAGTGGGGAAGTTGTTTTTCCCGAATACCATTACCATGCTTTGCAAGCGAGCAGGGGTTCTAGAGAATG
AAGGAGATGTTATTTTATTTGACAAGGGAATCATCGATACACCTAACTTGGCACGGCTTCAGCGTACGCAAGAGGCACGTCAGGGTGGGCTTGTCTACGGCATCAACACG
ATCTTAGAACAACTCGCACTTTCGGCCAGCAGGCAGGAGTTTGCCGAGAGGCAAGCTTTAACCTTCTGGAACTATGTTAAAAGTCGTGATGCCAATCTGAAGAAGGCACT
GCAGGAGAATTTTTCCAAACCCTTGGACTGGTTAAGCTTAATTAGGTCAAGAGCTAAGCTGTTGCAAGTTCTTAGAATTGAGTTAAAAGTGGTGATTATTTGTCCATGTC
GGAAGAATTATTTTGCTGCAGCAGAGCTTGGTTTTGCAGAATGCTCAGAATATGTTGTTGGGCGACTTGAGGGAGCAAATTCTGTGCTGCAGCAAAGCTGGGAGCAAAAA
CTGCCACGTCACAGCTCCCGAATAGAGGAGAGATTGGAGACCATCAAGAAGACCATCAATTGCAAGCTGATCAAGGGAATTAATACTTTCTTGCGTTATTTTGTAATTAT
GGATATGCTTACTCAGATTGTAACGTGGTACTTGAGGGCGTTGGCGATTGACGAGGCCTATGGCTTGATTGGCTATGGGACGACAGCTGCAATCTGGAAGAACCTTCTCG
GATTTGATGGACATCTTGAAAGCAATTTCGACACATCCACGGTACTAATTCGTTTCTACGCCGGTTGCTCCCCAAGGTTAATTGAGCTTAGGCTATGTCGGGAGCTGATC
ACGCTAATTGGTGTTAATTCGGGCCAATTACGGAGTTTTGGAGCCATCTCGATGTCTTGCCAGGAGGTGAAGAGACCCAATTGTGCTGAAGCGGGCCTGAATTATGACAC
CAAAAAGCCAAACATTGAAGCCCCAAATCGAGAAGAAGCGAGACAAAGCCGAGACATAAAGCAGGAAGTCGAGATGTGA
Protein sequenceShow/hide protein sequence
MRFIKQRLLPTTHDSTVSRERVLLAFAILRSLSINVGKIIASEISGCWKKKVGKLFFPNTITMLCKRAGVLENEGDVILFDKGIIDTPNLARLQRTQEARQGGLVYGINT
ILEQLALSASRQEFAERQALTFWNYVKSRDANLKKALQENFSKPLDWLSLIRSRAKLLQVLRIELKVVIICPCRKNYFAAAELGFAECSEYVVGRLEGANSVLQQSWEQK
LPRHSSRIEERLETIKKTINCKLIKGINTFLRYFVIMDMLTQIVTWYLRALAIDEAYGLIGYGTTAAIWKNLLGFDGHLESNFDTSTVLIRFYAGCSPRLIELRLCRELI
TLIGVNSGQLRSFGAISMSCQEVKRPNCAEAGLNYDTKKPNIEAPNREEARQSRDIKQEVEM