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Spg002076 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg002076
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionnucleolar protein 58-like
Genome locationscaffold2:26163941..26178329
RNA-Seq ExpressionSpg002076
SyntenySpg002076
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]1.0e-0431.69Show/hide
Query:  VSRDRVLLVFAILRSLSIDIGKVISSEIHNCWRKKVGKLFFPNTIIMLCNRAGVATTPDDVILLDKGIIDTPNLARLQR-------TQEARQVGLVCDIH
        VS+DR+LL++++L   SI++G++I SEI  C  +K G LFFP+ I  LC  A      ++  L   G ID   +AR+ +        Q +     V    
Subjt:  VSRDRVLLVFAILRSLSIDIGKVISSEIHNCWRKKVGKLFFPNTIIMLCNRAGVATTPDDVILLDKGIIDTPNLARLQR-------TQEARQVGLVCDIH

Query:  Q----ILEQLQLLARRQDHIKPSQFSPMTCSILGSRHHQLKE
        +    IL+QL+ L +R    +  Q+  M  S+L   H Q ++
Subjt:  Q----ILEQLQLLARRQDHIKPSQFSPMTCSILGSRHHQLKE

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]4.6e-0528.64Show/hide
Query:  RAKYLEMLKRDFLFERGFDEEEGFQAIVRRVAVDWSPGAINSPFNHQD--FPHVGYNEMVVVPSNDQLSATVREVGIE----------------GPSG--
        R ++L +++    F     + E     VR V V WS  AIN+ F   D    H  + E +  P    +  TV   G E                 P+   
Subjt:  RAKYLEMLKRDFLFERGFDEEEGFQAIVRRVAVDWSPGAINSPFNHQD--FPHVGYNEMVVVPSNDQLSATVREVGIE----------------GPSG--

Query:  -----------------VSRDRVLLVFAILRSLSIDIGKVISSEIHNCWRKKVGKLFFPNTIIMLCNRAGVATTPDDVILLDKGIIDTPNLARLQRTQE
                         VS+DR+LL+ ++L   SI++G++I SEI  C  +K G LFFP+ I  LC  A      +   L + G ID   +AR+  TQE
Subjt:  -----------------VSRDRVLLVFAILRSLSIDIGKVISSEIHNCWRKKVGKLFFPNTIIMLCNRAGVATTPDDVILLDKGIIDTPNLARLQRTQE

TYH88163.1 hypothetical protein ES332_D01G168900v1 [Gossypium tomentosum]7.1e-0650Show/hide
Query:  VSRDRVLLVFAILRSLSIDIGKVISSEIHNCWRKKVGKLFFPNTIIMLCNRAGVAT
        +S +R+LL++AIL   SI++GK+I  EIHNC +KK G ++FP+ I  LC +A V T
Subjt:  VSRDRVLLVFAILRSLSIDIGKVISSEIHNCWRKKVGKLFFPNTIIMLCNRAGVAT

XP_024971944.1 uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus]6.0e-0530.48Show/hide
Query:  SGVSRDRVLLVFAILRSLSIDIGKVISSEIHNCWRKKVGKLFFPNTIIMLCNRAGVATTPDDVILL---DKGIIDTPNLARL-QRTQEARQV-GLVCDIH
        S +S ++++L++ ++   +I++GKV+   I  C +++ GKLFFP+ I  L  +AGV    DD+++    +K  ID   +++L +R++  R++ G+   + 
Subjt:  SGVSRDRVLLVFAILRSLSIDIGKVISSEIHNCWRKKVGKLFFPNTIIMLCNRAGVATTPDDVILL---DKGIIDTPNLARL-QRTQEARQV-GLVCDIH

Query:  QILEQ
        ++LEQ
Subjt:  QILEQ

XP_024995361.1 formin-like protein 3 [Cynara cardunculus var. scolymus]2.1e-0534.91Show/hide
Query:  DRVLLVFAILRSLSIDIGKVISSEIHNCWRKKVGKLFFPNTIIMLCNRAGVATTPDDVILLDKGIIDTPNLARLQRTQEARQVGLVCDIHQILEQLQLLA
        +RVL+++ IL +   D+G++I S I  C  +  GKL +P+ I  L  +A V   P DV+ ++K  ID  NL RL R     Q          L+  +LL 
Subjt:  DRVLLVFAILRSLSIDIGKVISSEIHNCWRKKVGKLFFPNTIIMLCNRAGVATTPDDVILLDKGIIDTPNLARLQRTQEARQVGLVCDIHQILEQLQLLA

Query:  RRQDHI
          +DHI
Subjt:  RRQDHI

TrEMBL top hitse value%identityAlignment
A0A2P5BCG4 Uncharacterized protein (Fragment)5.0e-0531.69Show/hide
Query:  VSRDRVLLVFAILRSLSIDIGKVISSEIHNCWRKKVGKLFFPNTIIMLCNRAGVATTPDDVILLDKGIIDTPNLARL---------QRTQEARQVGLVCD
        VS+DR+LL+ ++L   SI++G++I SEI  C  +K G LFFP+ I  LC  A      ++  L + G ID   +AR+         Q+   +R      +
Subjt:  VSRDRVLLVFAILRSLSIDIGKVISSEIHNCWRKKVGKLFFPNTIIMLCNRAGVATTPDDVILLDKGIIDTPNLARL---------QRTQEARQVGLVCD

Query:  --IHQILEQLQLLARRQDHIKPSQFSPMTCSILGSRHHQLKE
             IL+QL+ L +R    +  Q+  M  S+L   H Q ++
Subjt:  --IHQILEQLQLLARRQDHIKPSQFSPMTCSILGSRHHQLKE

A0A2P5CEY2 Uncharacterized protein5.0e-0531.69Show/hide
Query:  VSRDRVLLVFAILRSLSIDIGKVISSEIHNCWRKKVGKLFFPNTIIMLCNRAGVATTPDDVILLDKGIIDTPNLARLQR-------TQEARQVGLVCDIH
        VS+DR+LL++++L   SI++G++I SEI  C  +K G LFFP+ I  LC  A      ++  L   G ID   +AR+ +        Q +     V    
Subjt:  VSRDRVLLVFAILRSLSIDIGKVISSEIHNCWRKKVGKLFFPNTIIMLCNRAGVATTPDDVILLDKGIIDTPNLARLQR-------TQEARQVGLVCDIH

Query:  Q----ILEQLQLLARRQDHIKPSQFSPMTCSILGSRHHQLKE
        +    IL+QL+ L +R    +  Q+  M  S+L   H Q ++
Subjt:  Q----ILEQLQLLARRQDHIKPSQFSPMTCSILGSRHHQLKE

A0A2P5DXM3 Uncharacterized protein2.2e-0528.64Show/hide
Query:  RAKYLEMLKRDFLFERGFDEEEGFQAIVRRVAVDWSPGAINSPFNHQD--FPHVGYNEMVVVPSNDQLSATVREVGIE----------------GPSG--
        R ++L +++    F     + E     VR V V WS  AIN+ F   D    H  + E +  P    +  TV   G E                 P+   
Subjt:  RAKYLEMLKRDFLFERGFDEEEGFQAIVRRVAVDWSPGAINSPFNHQD--FPHVGYNEMVVVPSNDQLSATVREVGIE----------------GPSG--

Query:  -----------------VSRDRVLLVFAILRSLSIDIGKVISSEIHNCWRKKVGKLFFPNTIIMLCNRAGVATTPDDVILLDKGIIDTPNLARLQRTQE
                         VS+DR+LL+ ++L   SI++G++I SEI  C  +K G LFFP+ I  LC  A      +   L + G ID   +AR+  TQE
Subjt:  -----------------VSRDRVLLVFAILRSLSIDIGKVISSEIHNCWRKKVGKLFFPNTIIMLCNRAGVATTPDDVILLDKGIIDTPNLARLQRTQE

A0A5D2MA47 Uncharacterized protein3.5e-0650Show/hide
Query:  VSRDRVLLVFAILRSLSIDIGKVISSEIHNCWRKKVGKLFFPNTIIMLCNRAGVAT
        +S +R+LL++AIL   SI++GK+I  EIHNC +KK G ++FP+ I  LC +A V T
Subjt:  VSRDRVLLVFAILRSLSIDIGKVISSEIHNCWRKKVGKLFFPNTIIMLCNRAGVAT

A0A7J9D573 Uncharacterized protein (Fragment)5.0e-0539.76Show/hide
Query:  IEGPSGVSRDRVLLVFAILRSLSIDIGKVISSEIHNCWRKKVGKLFFPNTIIMLCNRAGVATTPDDVILLDKGIIDTPNLARL
        I   S +S +++LL++AI+   SI+ GK+I  EIH+C RKK G  +F + I  LC +A V T  +      +G I + NL RL
Subjt:  IEGPSGVSRDRVLLVFAILRSLSIDIGKVISSEIHNCWRKKVGKLFFPNTIIMLCNRAGVATTPDDVILLDKGIIDTPNLARL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAAGCAATTAGAAGACAAGGGCAAAGGAGTTGCTGAAGCAACAGTCGAAGCAGAGGAGGCTGAGACTGAGGAGCCAAGACTGCCGTATGAGCGCTTTGTCAACGA
TCTTGCCAGAGCAAAATATCTGGAGATGCTGAAGAGGGACTTCTTGTTCGAAAGAGGATTCGATGAAGAGGAAGGTTTTCAAGCTATTGTCCGACGGGTTGCTGTAGATT
GGAGCCCAGGTGCGATAAACTCTCCATTTAATCACCAGGATTTTCCACATGTCGGATACAATGAGATGGTGGTAGTACCATCTAATGATCAGTTAAGCGCGACTGTAAGA
GAAGTTGGAATTGAAGGGCCCAGTGGAGTCTCTCGCGATAGAGTGCTCTTGGTTTTTGCAATTCTGAGGTCCCTGAGTATTGACATTGGTAAGGTTATCTCCAGTGAAAT
CCACAACTGCTGGCGCAAAAAGGTGGGCAAATTATTCTTTCCAAATACGATTATAATGCTGTGTAATAGGGCAGGGGTGGCCACAACTCCAGACGATGTTATTCTGCTTG
ACAAGGGGATTATTGACACGCCCAACCTAGCAAGGCTTCAACGTACACAAGAAGCTCGACAAGTGGGGCTAGTGTGCGACATCCATCAAATTTTAGAGCAACTTCAACTT
TTAGCCAGAAGGCAGGACCATATCAAACCTTCCCAGTTTTCCCCAATGACTTGTTCAATCCTTGGATCCCGCCACCACCAGTTGAAAGAGAGGAAGAAGAGGAGGATGAT
CAAGGTCTGGAAGATTGAAGGAGGAAAAGATATTGGGCGAGCATTAATTTTAAACCTTTTGCTTGAGCATTTCTTCTGCCCTGGTCATCGCTGCGGCAAGAAGATTATGA
GGGTTATTGGTTGCATTCGTGAATTATCTATGTCGGAGTCGAGTCACAGAAATGTGCATAACGCAGTGCTTGGTTTTGCAGAATGCTCAGTAGTTTTGGAGCAAATTCGT
CTTTGGTTAATTAAGGGCCTTGGAGCTAGGAGGATGGGTTGGATGTCTGTTGAAGTTGTGATTGAAGTTTGGATGCGAGATCTGACTCATTGTGACTATAGAAGTGTATT
ATCTTGTTTCCAGATTATGCCTCCACGTGTTCGAGGTCGAGGACGCGGTTGTGGACGTGGTAGGGGTCATGTACCTCCAAAACAAGTAGATACTCCGGTGGATCACCCAG
CTGAAGATCAGCCTAAGGCGCTCTCTGGTGAAGCTCGAGACTACGGGGCAGACGGTACAGCAGCTGCAGTGTGCAAATCAGTGAGTTTGTTGTGTTTTGCTCGGTTTTCG
TTTGGTTTTTTGCCCCTCGTGCCCGATCTCTCTCTCTTTAACGTTCTTTTCCTCTGTGCCCATCGTACTCCGGTGTTTCTCCAGCGGGCAGCAACTTTTAATCACGTTCT
AGTCGGTGTTGCAGCGTGGGTGTCGAGCGGCAGCGTTTTCAACAACCTTCGGGCAAGCGTCCTCGTCGTATCCGGTGATTTGAGTGTTGGATCTCCAAGTTTTAGCAGTT
TTGGAGCAAGTTCGTCTTTGGCTAAGGTAAGTAGCTTTTTGGACATGACTACTGTGCTTTTGACCCGCTACATGATGGGTTGGATGTTTATTGAAGTTGTGATTGAAGTT
TGGATGCGAGATCTGACTTGTTGTGACTATAGAAGTGTATTATCTTGTTTCCAGAGCCCAGTTCCAAGCACGCTATCATGCGCTCTCTCAGTTCAGGACGATGTTGAGTT
TATGATCAGGCACGTTGTTCGTGCGTCAGTTGGCACTCAGGTAGGTGTGAGTTTGGTGCATGAGCAATCCGCCTGGGGTAAGGTTCGAGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGAAGCAATTAGAAGACAAGGGCAAAGGAGTTGCTGAAGCAACAGTCGAAGCAGAGGAGGCTGAGACTGAGGAGCCAAGACTGCCGTATGAGCGCTTTGTCAACGA
TCTTGCCAGAGCAAAATATCTGGAGATGCTGAAGAGGGACTTCTTGTTCGAAAGAGGATTCGATGAAGAGGAAGGTTTTCAAGCTATTGTCCGACGGGTTGCTGTAGATT
GGAGCCCAGGTGCGATAAACTCTCCATTTAATCACCAGGATTTTCCACATGTCGGATACAATGAGATGGTGGTAGTACCATCTAATGATCAGTTAAGCGCGACTGTAAGA
GAAGTTGGAATTGAAGGGCCCAGTGGAGTCTCTCGCGATAGAGTGCTCTTGGTTTTTGCAATTCTGAGGTCCCTGAGTATTGACATTGGTAAGGTTATCTCCAGTGAAAT
CCACAACTGCTGGCGCAAAAAGGTGGGCAAATTATTCTTTCCAAATACGATTATAATGCTGTGTAATAGGGCAGGGGTGGCCACAACTCCAGACGATGTTATTCTGCTTG
ACAAGGGGATTATTGACACGCCCAACCTAGCAAGGCTTCAACGTACACAAGAAGCTCGACAAGTGGGGCTAGTGTGCGACATCCATCAAATTTTAGAGCAACTTCAACTT
TTAGCCAGAAGGCAGGACCATATCAAACCTTCCCAGTTTTCCCCAATGACTTGTTCAATCCTTGGATCCCGCCACCACCAGTTGAAAGAGAGGAAGAAGAGGAGGATGAT
CAAGGTCTGGAAGATTGAAGGAGGAAAAGATATTGGGCGAGCATTAATTTTAAACCTTTTGCTTGAGCATTTCTTCTGCCCTGGTCATCGCTGCGGCAAGAAGATTATGA
GGGTTATTGGTTGCATTCGTGAATTATCTATGTCGGAGTCGAGTCACAGAAATGTGCATAACGCAGTGCTTGGTTTTGCAGAATGCTCAGTAGTTTTGGAGCAAATTCGT
CTTTGGTTAATTAAGGGCCTTGGAGCTAGGAGGATGGGTTGGATGTCTGTTGAAGTTGTGATTGAAGTTTGGATGCGAGATCTGACTCATTGTGACTATAGAAGTGTATT
ATCTTGTTTCCAGATTATGCCTCCACGTGTTCGAGGTCGAGGACGCGGTTGTGGACGTGGTAGGGGTCATGTACCTCCAAAACAAGTAGATACTCCGGTGGATCACCCAG
CTGAAGATCAGCCTAAGGCGCTCTCTGGTGAAGCTCGAGACTACGGGGCAGACGGTACAGCAGCTGCAGTGTGCAAATCAGTGAGTTTGTTGTGTTTTGCTCGGTTTTCG
TTTGGTTTTTTGCCCCTCGTGCCCGATCTCTCTCTCTTTAACGTTCTTTTCCTCTGTGCCCATCGTACTCCGGTGTTTCTCCAGCGGGCAGCAACTTTTAATCACGTTCT
AGTCGGTGTTGCAGCGTGGGTGTCGAGCGGCAGCGTTTTCAACAACCTTCGGGCAAGCGTCCTCGTCGTATCCGGTGATTTGAGTGTTGGATCTCCAAGTTTTAGCAGTT
TTGGAGCAAGTTCGTCTTTGGCTAAGGTAAGTAGCTTTTTGGACATGACTACTGTGCTTTTGACCCGCTACATGATGGGTTGGATGTTTATTGAAGTTGTGATTGAAGTT
TGGATGCGAGATCTGACTTGTTGTGACTATAGAAGTGTATTATCTTGTTTCCAGAGCCCAGTTCCAAGCACGCTATCATGCGCTCTCTCAGTTCAGGACGATGTTGAGTT
TATGATCAGGCACGTTGTTCGTGCGTCAGTTGGCACTCAGGTAGGTGTGAGTTTGGTGCATGAGCAATCCGCCTGGGGTAAGGTTCGAGCTTGA
Protein sequenceShow/hide protein sequence
MMKQLEDKGKGVAEATVEAEEAETEEPRLPYERFVNDLARAKYLEMLKRDFLFERGFDEEEGFQAIVRRVAVDWSPGAINSPFNHQDFPHVGYNEMVVVPSNDQLSATVR
EVGIEGPSGVSRDRVLLVFAILRSLSIDIGKVISSEIHNCWRKKVGKLFFPNTIIMLCNRAGVATTPDDVILLDKGIIDTPNLARLQRTQEARQVGLVCDIHQILEQLQL
LARRQDHIKPSQFSPMTCSILGSRHHQLKERKKRRMIKVWKIEGGKDIGRALILNLLLEHFFCPGHRCGKKIMRVIGCIRELSMSESSHRNVHNAVLGFAECSVVLEQIR
LWLIKGLGARRMGWMSVEVVIEVWMRDLTHCDYRSVLSCFQIMPPRVRGRGRGCGRGRGHVPPKQVDTPVDHPAEDQPKALSGEARDYGADGTAAAVCKSVSLLCFARFS
FGFLPLVPDLSLFNVLFLCAHRTPVFLQRAATFNHVLVGVAAWVSSGSVFNNLRASVLVVSGDLSVGSPSFSSFGASSSLAKVSSFLDMTTVLLTRYMMGWMFIEVVIEV
WMRDLTCCDYRSVLSCFQSPVPSTLSCALSVQDDVEFMIRHVVRASVGTQVGVSLVHEQSAWGKVRA