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Spg002084 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg002084
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111022007
Genome locationscaffold2:26816012..26823761
RNA-Seq ExpressionSpg002084
SyntenySpg002084
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038876674.1 chromatin assembly factor 1 subunit A-like, partial [Benincasa hispida]3.7e-0941.67Show/hide
Query:  YPTGNMAIEEPSDEQLAEALSLVAHEGVKWKESLTGIKTLLSGDLKPEASVWLYVIKNRITPTTHDTTISQD
        Y +GN  I++P+++Q+ +AL ++   G+KW  SL G+ TL S  L  E  +W+Y++K R+  TTHD T+S+D
Subjt:  YPTGNMAIEEPSDEQLAEALSLVAHEGVKWKESLTGIKTLLSGDLKPEASVWLYVIKNRITPTTHDTTISQD

XP_038882424.1 uncharacterized protein LOC120073695 [Benincasa hispida]1.9e-0547.37Show/hide
Query:  LAEALSLVAHEGVKWKESLTGIKTLLSGDLKPEASVWLYVIKNRITPTTHDTTISQD
        L +ALS++   G++W   LTGI  L S  L P+A +W+Y++K  + PTTHD TIS+D
Subjt:  LAEALSLVAHEGVKWKESLTGIKTLLSGDLKPEASVWLYVIKNRITPTTHDTTISQD

XP_038888747.1 vicilin-like seed storage protein At2g18540 [Benincasa hispida]2.7e-0738.37Show/hide
Query:  GNMAIEEPSDEQLAEALSLVAHEGVKWKESLTGIKTLLSGDLKPEASVWLYVIKNRITPTTHDTTIS--------QDGSKGELKDF
        GN  I++P +  + + L ++   G +W  SL  IKTL S  L PEA +W+Y++K R+ PT+H+ T+S        Q  SK +L DF
Subjt:  GNMAIEEPSDEQLAEALSLVAHEGVKWKESLTGIKTLLSGDLKPEASVWLYVIKNRITPTTHDTTIS--------QDGSKGELKDF

XP_038898613.1 LOW QUALITY PROTEIN: uncharacterized protein LOC120086174 [Benincasa hispida]2.0e-0738.16Show/hide
Query:  GNMAIEEPSDEQLAEALSLVAHEGVKWKESLTGIKTLLSGDLKPEASVWLYVIKNRITPTTHDTTISQDGSKGELK
        GN  I++P++E +  AL ++A  G +W  S  GI+TL S  L  +  +W+Y++K ++ PTTHD T+S+D    ++K
Subjt:  GNMAIEEPSDEQLAEALSLVAHEGVKWKESLTGIKTLLSGDLKPEASVWLYVIKNRITPTTHDTTISQDGSKGELK

XP_038904385.1 uncharacterized protein LOC120090747 [Benincasa hispida]8.8e-1147.14Show/hide
Query:  TGNMAIEEPSDEQLAEALSLVAHEGVKWKESLTGIKTLLSGDLKPEASVWLYVIKNRITPTTHDTTISQD
        +GN  I++P +E++ +AL  +   G +W  SL GIKTL S  L PEA +W+Y++K RI PT+HD T+S+D
Subjt:  TGNMAIEEPSDEQLAEALSLVAHEGVKWKESLTGIKTLLSGDLKPEASVWLYVIKNRITPTTHDTTISQD

TrEMBL top hitse value%identityAlignment
A0A2P5CPE8 Uncharacterized protein8.6e-0438.46Show/hide
Query:  IEEPSDEQLAEALSLVAHEGVKWKESLTGIKTLLSGDLKPEASVWLYVIKNRITPTTHDTTISQD
        +E  ++ +LA  L  VA  G +W  S  G  T L   L P A VW + +K+R+ PTTH  T+S++
Subjt:  IEEPSDEQLAEALSLVAHEGVKWKESLTGIKTLLSGDLKPEASVWLYVIKNRITPTTHDTTISQD

A0A6J1DMT3 LOW QUALITY PROTEIN: uncharacterized protein LOC1110220072.7e-0539.13Show/hide
Query:  GNMAIEEPSDEQLAEALSLVAHEGVKWKESLTGIKTLLSGDLKPEASVWLYVIKNRITPTTHDTTISQD
        GN  +  PSDEQ+ EA  L+      W  S  G  +L   D+  +A+VW+YV+KNR+ PT++D++I ++
Subjt:  GNMAIEEPSDEQLAEALSLVAHEGVKWKESLTGIKTLLSGDLKPEASVWLYVIKNRITPTTHDTTISQD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTTGGCGTCGGCGTCGAGATGCCAAGGGCAGCTTCTCGACGCCAGCCTTGAATCTCGACTTTCTGCTTTAATTCTCGGTCTTGTCTCGCTTCTTCTCGTGGGAGC
AGGACACGTGTCAACGTATCCTACAGTCTCCATCATCAGGTTGCACCATGAGATTCCCATAATCTACCTCATTGTTGGGGCCGACCTTTCAGATCTGAAAATGAAGGGTC
CCACTTACAGGATATTGATAAGGTATCCAACAGGAAATATGGCCATTGAGGAGCCATCAGACGAACAGCTGGCAGAGGCCCTCTCTTTGGTGGCTCATGAGGGAGTAAAG
TGGAAAGAGTCTTTGACGGGGATCAAGACTCTTTTATCTGGAGATTTGAAGCCAGAGGCATCAGTCTGGCTCTATGTGATCAAGAACAGAATCACGCCAACAACGCACGA
CACGACCATCTCCCAAGATGGGTCAAAGGGAGAATTAAAGGACTTTAAATTGAAGACCAAAGGCCAAAAATCTGGTGAGAAAGACCCAAAGTTCAGCCGAAAACCGAGAG
CTGGAATTTCAATCCGAAGGACAGCGTCGCGACACTACCCCTTAGCGTCTCGACGCTGGAACGACTTGGGCAACAAGACAATTACGTCACAGCGTCGCGACGTTGTCGCA
CCTGGAGCACTATTTAAAGCGATATTTGGCCTCGGTTTTGGATCATCAAGCAAGTGTCTCGACGCCAGCCTTGATTCTCGACTTGTTGCTTTAATTCTCAGTTTTTTCTC
GTTTCTTCTCGGTACGGGGCTTCAATCTTCGGCTTTTGGTGTCATTCTTCAGGCCCACTTCAACACAATTGGGTCTTTTCACCTTCTCGCCGTTCAAGACACCGAGATGG
CTCCAAAACTCCAAGGTCTGCCTGATATGGGATTCGATCCTGATGAATTTTTTAATGATGATATGTTTGAAGGTGAAGAAATGTTGGAAGATTTTGAATTGCCTGTTTTG
TTGGACTATAATGAGCATGATGAAAATGATAGTGTCATACAGTCTAATGTAGATAATGCGTCTCATGTAGATATGCCTGTACAGAATACCACGCCTGATGAAGAGTCGGT
TCTTTTTGAAAAACCATCTCCGGATACGAGCCCCATAGATATCATGATGCTTGACTTTTCTGTTAATAATTGTTTCGAGAATAGAGATTTAGAGAAAATGTTTGACCTTG
ATGCCTGGATTTTAGATAATTATTTGTTATGTGATGAGAGCTTAGAAAAGTATTCTTTCTATCCCCTGTTCTTTTTCTGTAAGACTGCAATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTTTGGCGTCGGCGTCGAGATGCCAAGGGCAGCTTCTCGACGCCAGCCTTGAATCTCGACTTTCTGCTTTAATTCTCGGTCTTGTCTCGCTTCTTCTCGTGGGAGC
AGGACACGTGTCAACGTATCCTACAGTCTCCATCATCAGGTTGCACCATGAGATTCCCATAATCTACCTCATTGTTGGGGCCGACCTTTCAGATCTGAAAATGAAGGGTC
CCACTTACAGGATATTGATAAGGTATCCAACAGGAAATATGGCCATTGAGGAGCCATCAGACGAACAGCTGGCAGAGGCCCTCTCTTTGGTGGCTCATGAGGGAGTAAAG
TGGAAAGAGTCTTTGACGGGGATCAAGACTCTTTTATCTGGAGATTTGAAGCCAGAGGCATCAGTCTGGCTCTATGTGATCAAGAACAGAATCACGCCAACAACGCACGA
CACGACCATCTCCCAAGATGGGTCAAAGGGAGAATTAAAGGACTTTAAATTGAAGACCAAAGGCCAAAAATCTGGTGAGAAAGACCCAAAGTTCAGCCGAAAACCGAGAG
CTGGAATTTCAATCCGAAGGACAGCGTCGCGACACTACCCCTTAGCGTCTCGACGCTGGAACGACTTGGGCAACAAGACAATTACGTCACAGCGTCGCGACGTTGTCGCA
CCTGGAGCACTATTTAAAGCGATATTTGGCCTCGGTTTTGGATCATCAAGCAAGTGTCTCGACGCCAGCCTTGATTCTCGACTTGTTGCTTTAATTCTCAGTTTTTTCTC
GTTTCTTCTCGGTACGGGGCTTCAATCTTCGGCTTTTGGTGTCATTCTTCAGGCCCACTTCAACACAATTGGGTCTTTTCACCTTCTCGCCGTTCAAGACACCGAGATGG
CTCCAAAACTCCAAGGTCTGCCTGATATGGGATTCGATCCTGATGAATTTTTTAATGATGATATGTTTGAAGGTGAAGAAATGTTGGAAGATTTTGAATTGCCTGTTTTG
TTGGACTATAATGAGCATGATGAAAATGATAGTGTCATACAGTCTAATGTAGATAATGCGTCTCATGTAGATATGCCTGTACAGAATACCACGCCTGATGAAGAGTCGGT
TCTTTTTGAAAAACCATCTCCGGATACGAGCCCCATAGATATCATGATGCTTGACTTTTCTGTTAATAATTGTTTCGAGAATAGAGATTTAGAGAAAATGTTTGACCTTG
ATGCCTGGATTTTAGATAATTATTTGTTATGTGATGAGAGCTTAGAAAAGTATTCTTTCTATCCCCTGTTCTTTTTCTGTAAGACTGCAATGTGA
Protein sequenceShow/hide protein sequence
MILASASRCQGQLLDASLESRLSALILGLVSLLLVGAGHVSTYPTVSIIRLHHEIPIIYLIVGADLSDLKMKGPTYRILIRYPTGNMAIEEPSDEQLAEALSLVAHEGVK
WKESLTGIKTLLSGDLKPEASVWLYVIKNRITPTTHDTTISQDGSKGELKDFKLKTKGQKSGEKDPKFSRKPRAGISIRRTASRHYPLASRRWNDLGNKTITSQRRDVVA
PGALFKAIFGLGFGSSSKCLDASLDSRLVALILSFFSFLLGTGLQSSAFGVILQAHFNTIGSFHLLAVQDTEMAPKLQGLPDMGFDPDEFFNDDMFEGEEMLEDFELPVL
LDYNEHDENDSVIQSNVDNASHVDMPVQNTTPDEESVLFEKPSPDTSPIDIMMLDFSVNNCFENRDLEKMFDLDAWILDNYLLCDESLEKYSFYPLFFFCKTAM