; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg002101 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg002101
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationscaffold2:27552035..27558793
RNA-Seq ExpressionSpg002101
SyntenySpg002101
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022159345.1 uncharacterized protein LOC111025764 [Momordica charantia]8.2e-1856.25Show/hide
Query:  PAVEPTAVVLPQQNKQVLPQQNKQVLPQQNSENSLEAMMKEFMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLR
        P V PT   +P   ++    Q  Q  P QN+ ++LE MMKE+MARTDA IQS  ASMR  E Q+GQLANELK RPQG  P  TE P+REGKEQ KAVTLR
Subjt:  PAVEPTAVVLPQQNKQVLPQQNKQVLPQQNSENSLEAMMKEFMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLR

Query:  SGKPLEERKEPS
        SG   +E   P+
Subjt:  SGKPLEERKEPS

XP_030498047.1 uncharacterized protein LOC115713707 [Cannabis sativa]3.7e-1855.65Show/hide
Query:  PQQNKQVLPQQNKQVLPQQNSENSLEAMMKEFMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPLEER--
        P  ++Q  PQQ+ Q  PQ +  +SLE++M+++MA+ DA IQS  AS+R LE+Q+GQLAN LK RPQG LPSDTE+PRR+GKE  KA+TLRSGK LE    
Subjt:  PQQNKQVLPQQNKQVLPQQNSENSLEAMMKEFMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPLEER--

Query:  ----KEPSQTQDIDN
            KEPS  Q   N
Subjt:  ----KEPSQTQDIDN

XP_030503898.1 uncharacterized protein LOC115719117 [Cannabis sativa]4.8e-1856.76Show/hide
Query:  PQQNKQVLPQQNKQVLPQQNSENSLEAMMKEFMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPLEER--
        P  ++Q  PQQ  Q  PQ +  +SLE++M+++MA+ DA IQS  AS+R LE+Q+GQLAN+LK RPQG LPSDTE+PRR+GKE  KAVTLRSGK +E    
Subjt:  PQQNKQVLPQQNKQVLPQQNSENSLEAMMKEFMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPLEER--

Query:  ----KEPSQTQ
            KEPS  Q
Subjt:  ----KEPSQTQ

XP_030507648.1 uncharacterized protein LOC115722545 [Cannabis sativa]8.2e-1859.18Show/hide
Query:  QNKQVLP----QQNKQVLPQQNSENSLEAMMKEFMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPLE
        Q KQ  P    QQ +   PQ +  +SLE++M+++MA+ DA IQS  AS+R LE+Q+GQLAN+LK RPQG LPSDTE+PRR+GKE  KA+TLRSGK LE
Subjt:  QNKQVLP----QQNKQVLPQQNSENSLEAMMKEFMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPLE

XP_030509259.1 uncharacterized protein LOC115723937 [Cannabis sativa]4.8e-1856.76Show/hide
Query:  PQQNKQVLPQQNKQVLPQQNSENSLEAMMKEFMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPLEER--
        P  ++Q  PQQ  Q  PQ +  +SLE++M+++MA+ DA IQS  AS+R LE+Q+GQLAN+LK RPQG LPSDTE+PRR+GKE  KAVTLRSGK +E    
Subjt:  PQQNKQVLPQQNKQVLPQQNSENSLEAMMKEFMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPLEER--

Query:  ----KEPSQTQ
            KEPS  Q
Subjt:  ----KEPSQTQ

TrEMBL top hitse value%identityAlignment
A0A6J1DW02 uncharacterized protein LOC1110248974.4e-1759.8Show/hide
Query:  PAVEPTAVVLPQQNKQVLPQQNKQVLPQQNSENSLEAMMKEFMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLR
        P V PT   +P   +Q    Q  Q  P QN+ ++LE MMKE+MARTDA IQS  ASMR    Q+G LANELK RPQG  P  TE PRREGKEQ KAVTLR
Subjt:  PAVEPTAVVLPQQNKQVLPQQNKQVLPQQNSENSLEAMMKEFMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLR

Query:  SG
        SG
Subjt:  SG

A0A6J1DWK1 uncharacterized protein LOC1110250532.3e-1355.91Show/hide
Query:  QNSENSLEAMMKEFMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPLEE--------RKEPSQ
        + S  SLE +MK++MA  DA +QS  AS+R LELQVGQLA +LK+RP G LPSDTE P+R+ KEQ  A+TLRSGK L           KEP+Q
Subjt:  QNSENSLEAMMKEFMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPLEE--------RKEPSQ

A0A6J1DYG0 uncharacterized protein LOC1110257644.0e-1856.25Show/hide
Query:  PAVEPTAVVLPQQNKQVLPQQNKQVLPQQNSENSLEAMMKEFMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLR
        P V PT   +P   ++    Q  Q  P QN+ ++LE MMKE+MARTDA IQS  ASMR  E Q+GQLANELK RPQG  P  TE P+REGKEQ KAVTLR
Subjt:  PAVEPTAVVLPQQNKQVLPQQNKQVLPQQNSENSLEAMMKEFMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLR

Query:  SGKPLEERKEPS
        SG   +E   P+
Subjt:  SGKPLEERKEPS

A0A6J1GJ68 uncharacterized protein LOC1114543441.7e-1345.74Show/hide
Query:  LPQQNKQVLPQQNKQVLPQQNSENSLEAMMKEFMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPLEERK
        L   ++QV  Q       Q  S  S+E+++KE+MA+ D  IQS QAS++ LE+QVGQLA EL+ RP GKLP+DTE P+REGKEQ +A+ LRSGK +    
Subjt:  LPQQNKQVLPQQNKQVLPQQNSENSLEAMMKEFMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPLEERK

Query:  E------PSQTQDIDNNCDRNN--VVEKE
        E       S +Q+  +   RN+   V+KE
Subjt:  E------PSQTQDIDNNCDRNN--VVEKE

A0A6J1H7K8 uncharacterized protein LOC1114611677.0e-1540.46Show/hide
Query:  QQNSENSLEAMMKEFMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPLEERKE------PSQTQDIDNNC
        Q   E SLE+++KE+MA+ D  IQS QAS+R LE+QVGQLANEL+ RP GKLPSDTE P+REG EQ +A+ LRSGK +  R+E       S++Q+  +  
Subjt:  QQNSENSLEAMMKEFMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPLEERKE------PSQTQDIDNNC

Query:  DRNN--VVEKELESGQGAGGSNKDAGASGFLELKPYLLETLARKERENEAEEVHVTPVAQKAKTKKKKMPEEK
         R    VV++E           K+   +    +KP   +T     +E+        P  Q+ K KK++   EK
Subjt:  DRNN--VVEKELESGQGAGGSNKDAGASGFLELKPYLLETLARKERENEAEEVHVTPVAQKAKTKKKKMPEEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGATCCGCCTGGGGTGAGGTTCGAGCTTGATCCAGAAATTGAGAGGACATTCAGGATAAGAAGGAGAGAGCAGCGTAGACAGCAAAATCAAATGGCTGACGTACC
GCATCTACCGCAGGGTCCTGAAGGTCTAGCGAACCCCCAGCAGAATCGTGTGCTGCAGCAAAACCCGCCGCTGGAGCAAAATGAGCAGCAAAATAATCAGGCTGAGAATC
CTATCTTGAATGTGACAGTGATTAGTCATCAGCAGCCGCCGGCTGTGGAGCCTACTGCAGTGGTATTGCCCCAGCAAAATAAGCAGGTTTTGCCCCAGCAAAATAAGCAG
GTTTTGCCCCAGCAAAATTCGGAGAATTCTCTCGAGGCAATGATGAAAGAATTTATGGCTCGTACAGATGCCGCTATTCAAAGTAATCAAGCTTCAATGAGAGCCCTTGA
ATTGCAAGTGGGTCAGTTAGCCAATGAGCTGAAGGCAAGGCCTCAAGGGAAACTTCCTTCAGATACTGAACACCCTAGAAGGGAAGGTAAGGAGCAGGTAAAAGCAGTGA
CTCTTAGGAGCGGTAAGCCACTAGAAGAAAGAAAAGAGCCTAGTCAAACCCAGGATATAGATAATAATTGTGATAGAAATAATGTTGTTGAGAAAGAGCTGGAGTCTGGT
CAGGGTGCTGGAGGCAGCAATAAAGATGCTGGAGCATCTGGATTTCTTGAGCTGAAGCCTTATTTATTGGAAACCCTCGCTAGAAAAGAGAGGGAGAATGAGGCAGAAGA
GGTACATGTTACCCCTGTAGCACAGAAAGCGAAAACGAAAAAGAAGAAGATGCCAGAGGAGAAAGAAGCGAAAAGGAGGAGAAAGCAACAGAGGGCTGAGGAACAAGAAA
AGGCAACAGAGGTTGAGACTGTTACTGCCACAGTAGGAGAAGAAAGCACGAAACAACCAGAGGAAAATACCGAGGAAAATACCGAGCAGAGGGTCGCGGATACAGGAGAA
GAACGAACAGAAGAGGTTCAAGAAGATCGGACTGAGGAACTCCGAGAAGAGCTTACAGAGGAAATTCAAGAACAGCAGGCCGAGGATGTTCAAATGCAACGGGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCGATCCGCCTGGGGTGAGGTTCGAGCTTGATCCAGAAATTGAGAGGACATTCAGGATAAGAAGGAGAGAGCAGCGTAGACAGCAAAATCAAATGGCTGACGTACC
GCATCTACCGCAGGGTCCTGAAGGTCTAGCGAACCCCCAGCAGAATCGTGTGCTGCAGCAAAACCCGCCGCTGGAGCAAAATGAGCAGCAAAATAATCAGGCTGAGAATC
CTATCTTGAATGTGACAGTGATTAGTCATCAGCAGCCGCCGGCTGTGGAGCCTACTGCAGTGGTATTGCCCCAGCAAAATAAGCAGGTTTTGCCCCAGCAAAATAAGCAG
GTTTTGCCCCAGCAAAATTCGGAGAATTCTCTCGAGGCAATGATGAAAGAATTTATGGCTCGTACAGATGCCGCTATTCAAAGTAATCAAGCTTCAATGAGAGCCCTTGA
ATTGCAAGTGGGTCAGTTAGCCAATGAGCTGAAGGCAAGGCCTCAAGGGAAACTTCCTTCAGATACTGAACACCCTAGAAGGGAAGGTAAGGAGCAGGTAAAAGCAGTGA
CTCTTAGGAGCGGTAAGCCACTAGAAGAAAGAAAAGAGCCTAGTCAAACCCAGGATATAGATAATAATTGTGATAGAAATAATGTTGTTGAGAAAGAGCTGGAGTCTGGT
CAGGGTGCTGGAGGCAGCAATAAAGATGCTGGAGCATCTGGATTTCTTGAGCTGAAGCCTTATTTATTGGAAACCCTCGCTAGAAAAGAGAGGGAGAATGAGGCAGAAGA
GGTACATGTTACCCCTGTAGCACAGAAAGCGAAAACGAAAAAGAAGAAGATGCCAGAGGAGAAAGAAGCGAAAAGGAGGAGAAAGCAACAGAGGGCTGAGGAACAAGAAA
AGGCAACAGAGGTTGAGACTGTTACTGCCACAGTAGGAGAAGAAAGCACGAAACAACCAGAGGAAAATACCGAGGAAAATACCGAGCAGAGGGTCGCGGATACAGGAGAA
GAACGAACAGAAGAGGTTCAAGAAGATCGGACTGAGGAACTCCGAGAAGAGCTTACAGAGGAAATTCAAGAACAGCAGGCCGAGGATGTTCAAATGCAACGGGCATAA
Protein sequenceShow/hide protein sequence
MSDPPGVRFELDPEIERTFRIRRREQRRQQNQMADVPHLPQGPEGLANPQQNRVLQQNPPLEQNEQQNNQAENPILNVTVISHQQPPAVEPTAVVLPQQNKQVLPQQNKQ
VLPQQNSENSLEAMMKEFMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPLEERKEPSQTQDIDNNCDRNNVVEKELESG
QGAGGSNKDAGASGFLELKPYLLETLARKERENEAEEVHVTPVAQKAKTKKKKMPEEKEAKRRRKQQRAEEQEKATEVETVTATVGEESTKQPEENTEENTEQRVADTGE
ERTEEVQEDRTEELREELTEEIQEQQAEDVQMQRA