; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg002111 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg002111
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationscaffold2:25312546..25315046
RNA-Seq ExpressionSpg002111
SyntenySpg002111
Gene Ontology termsGO:0005515 - protein binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062552.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]1.1e-11284.19Show/hide
Query:  GALDLGKWTHAYINRHGLEVDIILKTALIDMYAKCRDLKIARILFDEVTRRDISMWNAMMAGLSMHGCGKEALELFSKMESHGVEPNDITFISVFHACSH
        G LDLGKWTHAYINRHGLEVD+IL+TALI+MY KC D+ IAR LFDE T+RDI MWNAMMAG SMHGCGKEALELFS+MESHGVEPNDITFIS+FHACSH
Subjt:  GALDLGKWTHAYINRHGLEVDIILKTALIDMYAKCRDLKIARILFDEVTRRDISMWNAMMAGLSMHGCGKEALELFSKMESHGVEPNDITFISVFHACSH

Query:  SGLLPEGKKHFNRMVHDFGIVPKIEHYGCLVDFLGRAGHLDEAYNIIQNMPMRPNTIIWIGVLCLLHVSLYKNLALGEVAARKILELDPQNCGYNVLKSN
        SGL+ EGKKHFNRMVH FGIVPK+EHYGCLVD LGRAGHL+EA+NII+NMPMRPNTIIW G L L    L+KNLALGEVAARKILELDPQNCGY+VLKSN
Subjt:  SGLLPEGKKHFNRMVHDFGIVPKIEHYGCLVDFLGRAGHLDEAYNIIQNMPMRPNTIIWIGVLCLLHVSLYKNLALGEVAARKILELDPQNCGYNVLKSN

Query:  IYASARRWTDVTSIRETMNNLGMKKEPGLSWIEV
        IYASA+RW DVTS+RETM++LGMKKEPGLSWIEV
Subjt:  IYASARRWTDVTSIRETMNNLGMKKEPGLSWIEV

KAE8653622.1 hypothetical protein Csa_007111 [Cucumis sativus]1.3e-11082.48Show/hide
Query:  GALDLGKWTHAYINRHGLEVDIILKTALIDMYAKCRDLKIARILFDEVTRRDISMWNAMMAGLSMHGCGKEALELFSKMESHGVEPNDITFISVFHACSH
        GALDLGKWTHAYINRHGLEVD+IL+TALI+MYAKC D+ IAR LF+E  +RDI MWN MMAG SMHGCGKEALELFS+MESHGVEPNDITF+S+FHACSH
Subjt:  GALDLGKWTHAYINRHGLEVDIILKTALIDMYAKCRDLKIARILFDEVTRRDISMWNAMMAGLSMHGCGKEALELFSKMESHGVEPNDITFISVFHACSH

Query:  SGLLPEGKKHFNRMVHDFGIVPKIEHYGCLVDFLGRAGHLDEAYNIIQNMPMRPNTIIWIGVLCLLHVSLYKNLALGEVAARKILELDPQNCGYNVLKSN
        SGL+ EGKK+FN+MVHDFGIVPK+EHYGCLVD LGRAGHLDEA+NII+NMPMRPNTIIW G L L    L+KNLALGEVAARKILELDPQNCGY+VLKSN
Subjt:  SGLLPEGKKHFNRMVHDFGIVPKIEHYGCLVDFLGRAGHLDEAYNIIQNMPMRPNTIIWIGVLCLLHVSLYKNLALGEVAARKILELDPQNCGYNVLKSN

Query:  IYASARRWTDVTSIRETMNNLGMKKEPGLSWIEV
        IYASA+RW DVTS+RE M++ GMKKEPGLSWIEV
Subjt:  IYASARRWTDVTSIRETMNNLGMKKEPGLSWIEV

XP_008462708.1 PREDICTED: pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like [Cucumis melo]8.0e-11384.19Show/hide
Query:  GALDLGKWTHAYINRHGLEVDIILKTALIDMYAKCRDLKIARILFDEVTRRDISMWNAMMAGLSMHGCGKEALELFSKMESHGVEPNDITFISVFHACSH
        G LDLGKWTHAYINRHGLEVD+IL+TALI+MY KC D+ IAR LFDE T+RDI MWNAMMAG SMHGCGKEALELFS+MESHGVEPNDITFIS+FHACSH
Subjt:  GALDLGKWTHAYINRHGLEVDIILKTALIDMYAKCRDLKIARILFDEVTRRDISMWNAMMAGLSMHGCGKEALELFSKMESHGVEPNDITFISVFHACSH

Query:  SGLLPEGKKHFNRMVHDFGIVPKIEHYGCLVDFLGRAGHLDEAYNIIQNMPMRPNTIIWIGVLCLLHVSLYKNLALGEVAARKILELDPQNCGYNVLKSN
        SGL+ EGKKHFNRMVH+FGIVPK+EHYGCLVD LGRAGHL+EA+NII+NMPMRPNTIIW G L L    L+KNLALGEVAARKILELDPQNCGY+VLKSN
Subjt:  SGLLPEGKKHFNRMVHDFGIVPKIEHYGCLVDFLGRAGHLDEAYNIIQNMPMRPNTIIWIGVLCLLHVSLYKNLALGEVAARKILELDPQNCGYNVLKSN

Query:  IYASARRWTDVTSIRETMNNLGMKKEPGLSWIEV
        IYASA+RW DVTS+RETM++LGMKKEPGLSWIEV
Subjt:  IYASARRWTDVTSIRETMNNLGMKKEPGLSWIEV

XP_011660280.1 pentatricopeptide repeat-containing protein At3g26782, mitochondrial [Cucumis sativus]1.3e-11082.48Show/hide
Query:  GALDLGKWTHAYINRHGLEVDIILKTALIDMYAKCRDLKIARILFDEVTRRDISMWNAMMAGLSMHGCGKEALELFSKMESHGVEPNDITFISVFHACSH
        GALDLGKWTHAYINRHGLEVD+IL+TALI+MYAKC D+ IAR LF+E  +RDI MWN MMAG SMHGCGKEALELFS+MESHGVEPNDITF+S+FHACSH
Subjt:  GALDLGKWTHAYINRHGLEVDIILKTALIDMYAKCRDLKIARILFDEVTRRDISMWNAMMAGLSMHGCGKEALELFSKMESHGVEPNDITFISVFHACSH

Query:  SGLLPEGKKHFNRMVHDFGIVPKIEHYGCLVDFLGRAGHLDEAYNIIQNMPMRPNTIIWIGVLCLLHVSLYKNLALGEVAARKILELDPQNCGYNVLKSN
        SGL+ EGKK+FN+MVHDFGIVPK+EHYGCLVD LGRAGHLDEA+NII+NMPMRPNTIIW G L L    L+KNLALGEVAARKILELDPQNCGY+VLKSN
Subjt:  SGLLPEGKKHFNRMVHDFGIVPKIEHYGCLVDFLGRAGHLDEAYNIIQNMPMRPNTIIWIGVLCLLHVSLYKNLALGEVAARKILELDPQNCGYNVLKSN

Query:  IYASARRWTDVTSIRETMNNLGMKKEPGLSWIEV
        IYASA+RW DVTS+RE M++ GMKKEPGLSWIEV
Subjt:  IYASARRWTDVTSIRETMNNLGMKKEPGLSWIEV

XP_038879151.1 pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like [Benincasa hispida]3.6e-11384.62Show/hide
Query:  GALDLGKWTHAYINRHGLEVDIILKTALIDMYAKCRDLKIARILFDEVTRRDISMWNAMMAGLSMHGCGKEALELFSKMESHGVEPNDITFISVFHACSH
        GAL+LGKWTH YINRHGLEVD++L+TALI+MYAKC DL IAR LFDE T+RDI MWNAMMAG SMHGCGKEALELFS+ME +GVEPNDITFISVFHACSH
Subjt:  GALDLGKWTHAYINRHGLEVDIILKTALIDMYAKCRDLKIARILFDEVTRRDISMWNAMMAGLSMHGCGKEALELFSKMESHGVEPNDITFISVFHACSH

Query:  SGLLPEGKKHFNRMVHDFGIVPKIEHYGCLVDFLGRAGHLDEAYNIIQNMPMRPNTIIWIGVLCLLHVSLYKNLALGEVAARKILELDPQNCGYNVLKSN
        SGL+ +GKKHFNRMVHDFGIVPKIEHYGCLVD LGRAGHLDEA+NII+NMPM+PNTIIW G L L    L+KNLALGEVAARKILELDPQNCGY+VLKSN
Subjt:  SGLLPEGKKHFNRMVHDFGIVPKIEHYGCLVDFLGRAGHLDEAYNIIQNMPMRPNTIIWIGVLCLLHVSLYKNLALGEVAARKILELDPQNCGYNVLKSN

Query:  IYASARRWTDVTSIRETMNNLGMKKEPGLSWIEV
        IYASA+RWTDVTS+RETM++LGMKKEPGLSWIEV
Subjt:  IYASARRWTDVTSIRETMNNLGMKKEPGLSWIEV

TrEMBL top hitse value%identityAlignment
A0A0A0LYC2 DYW_deaminase domain-containing protein6.2e-11182.48Show/hide
Query:  GALDLGKWTHAYINRHGLEVDIILKTALIDMYAKCRDLKIARILFDEVTRRDISMWNAMMAGLSMHGCGKEALELFSKMESHGVEPNDITFISVFHACSH
        GALDLGKWTHAYINRHGLEVD+IL+TALI+MYAKC D+ IAR LF+E  +RDI MWN MMAG SMHGCGKEALELFS+MESHGVEPNDITF+S+FHACSH
Subjt:  GALDLGKWTHAYINRHGLEVDIILKTALIDMYAKCRDLKIARILFDEVTRRDISMWNAMMAGLSMHGCGKEALELFSKMESHGVEPNDITFISVFHACSH

Query:  SGLLPEGKKHFNRMVHDFGIVPKIEHYGCLVDFLGRAGHLDEAYNIIQNMPMRPNTIIWIGVLCLLHVSLYKNLALGEVAARKILELDPQNCGYNVLKSN
        SGL+ EGKK+FN+MVHDFGIVPK+EHYGCLVD LGRAGHLDEA+NII+NMPMRPNTIIW G L L    L+KNLALGEVAARKILELDPQNCGY+VLKSN
Subjt:  SGLLPEGKKHFNRMVHDFGIVPKIEHYGCLVDFLGRAGHLDEAYNIIQNMPMRPNTIIWIGVLCLLHVSLYKNLALGEVAARKILELDPQNCGYNVLKSN

Query:  IYASARRWTDVTSIRETMNNLGMKKEPGLSWIEV
        IYASA+RW DVTS+RE M++ GMKKEPGLSWIEV
Subjt:  IYASARRWTDVTSIRETMNNLGMKKEPGLSWIEV

A0A1S3CJ58 pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like3.9e-11384.19Show/hide
Query:  GALDLGKWTHAYINRHGLEVDIILKTALIDMYAKCRDLKIARILFDEVTRRDISMWNAMMAGLSMHGCGKEALELFSKMESHGVEPNDITFISVFHACSH
        G LDLGKWTHAYINRHGLEVD+IL+TALI+MY KC D+ IAR LFDE T+RDI MWNAMMAG SMHGCGKEALELFS+MESHGVEPNDITFIS+FHACSH
Subjt:  GALDLGKWTHAYINRHGLEVDIILKTALIDMYAKCRDLKIARILFDEVTRRDISMWNAMMAGLSMHGCGKEALELFSKMESHGVEPNDITFISVFHACSH

Query:  SGLLPEGKKHFNRMVHDFGIVPKIEHYGCLVDFLGRAGHLDEAYNIIQNMPMRPNTIIWIGVLCLLHVSLYKNLALGEVAARKILELDPQNCGYNVLKSN
        SGL+ EGKKHFNRMVH+FGIVPK+EHYGCLVD LGRAGHL+EA+NII+NMPMRPNTIIW G L L    L+KNLALGEVAARKILELDPQNCGY+VLKSN
Subjt:  SGLLPEGKKHFNRMVHDFGIVPKIEHYGCLVDFLGRAGHLDEAYNIIQNMPMRPNTIIWIGVLCLLHVSLYKNLALGEVAARKILELDPQNCGYNVLKSN

Query:  IYASARRWTDVTSIRETMNNLGMKKEPGLSWIEV
        IYASA+RW DVTS+RETM++LGMKKEPGLSWIEV
Subjt:  IYASARRWTDVTSIRETMNNLGMKKEPGLSWIEV

A0A5A7V2V9 Pentatricopeptide repeat-containing protein5.1e-11384.19Show/hide
Query:  GALDLGKWTHAYINRHGLEVDIILKTALIDMYAKCRDLKIARILFDEVTRRDISMWNAMMAGLSMHGCGKEALELFSKMESHGVEPNDITFISVFHACSH
        G LDLGKWTHAYINRHGLEVD+IL+TALI+MY KC D+ IAR LFDE T+RDI MWNAMMAG SMHGCGKEALELFS+MESHGVEPNDITFIS+FHACSH
Subjt:  GALDLGKWTHAYINRHGLEVDIILKTALIDMYAKCRDLKIARILFDEVTRRDISMWNAMMAGLSMHGCGKEALELFSKMESHGVEPNDITFISVFHACSH

Query:  SGLLPEGKKHFNRMVHDFGIVPKIEHYGCLVDFLGRAGHLDEAYNIIQNMPMRPNTIIWIGVLCLLHVSLYKNLALGEVAARKILELDPQNCGYNVLKSN
        SGL+ EGKKHFNRMVH FGIVPK+EHYGCLVD LGRAGHL+EA+NII+NMPMRPNTIIW G L L    L+KNLALGEVAARKILELDPQNCGY+VLKSN
Subjt:  SGLLPEGKKHFNRMVHDFGIVPKIEHYGCLVDFLGRAGHLDEAYNIIQNMPMRPNTIIWIGVLCLLHVSLYKNLALGEVAARKILELDPQNCGYNVLKSN

Query:  IYASARRWTDVTSIRETMNNLGMKKEPGLSWIEV
        IYASA+RW DVTS+RETM++LGMKKEPGLSWIEV
Subjt:  IYASARRWTDVTSIRETMNNLGMKKEPGLSWIEV

A0A6J1DQU9 pentatricopeptide repeat-containing protein At3g62890-like2.6e-10982.48Show/hide
Query:  GALDLGKWTHAYINRHGLEVDIILKTALIDMYAKCRDLKIARILFDEVTRRDISMWNAMMAGLSMHGCGKEALELFSKMESHGVEPNDITFISVFHACSH
        GALD GKWTHAYI+RHGLEVDIILKTALIDMYAKC DLKIAR LFDE  +RDISMWNAM+AG SMHG GKEALELFS+MESHGVEPNDITFIS+FHACSH
Subjt:  GALDLGKWTHAYINRHGLEVDIILKTALIDMYAKCRDLKIARILFDEVTRRDISMWNAMMAGLSMHGCGKEALELFSKMESHGVEPNDITFISVFHACSH

Query:  SGLLPEGKKHFNRMVHDFGIVPKIEHYGCLVDFLGRAGHLDEAYNIIQNMPMRPNTIIWIGVLCLLHVSLYKNLALGEVAARKILELDPQNCGYNVLKSN
        SG++ EGKKHF+RMVH +G+VPK+EHYGCLVD LGRAG+L EA+ IIQNMPM+PNT+IW G L L    L+KNLALGEVAAR +LELDPQNCGY+VL+SN
Subjt:  SGLLPEGKKHFNRMVHDFGIVPKIEHYGCLVDFLGRAGHLDEAYNIIQNMPMRPNTIIWIGVLCLLHVSLYKNLALGEVAARKILELDPQNCGYNVLKSN

Query:  IYASARRWTDVTSIRETMNNLGMKKEPGLSWIEV
        IYASA+RWTDVTSIRE MNNLGMKKEPGLSWIEV
Subjt:  IYASARRWTDVTSIRETMNNLGMKKEPGLSWIEV

A0A6J1HA74 pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like9.9e-10981.28Show/hide
Query:  VGALDLGKWTHAYINRHGLEVDIILKTALIDMYAKCRDLKIARILFDEVTRRDISMWNAMMAGLSMHGCGKEALELFSKMESHGVEPNDITFISVFHACS
        VGALDLG+WTHAYINRHG+EVD++L+TALI+MYAKC DLK AR LFDE TRRDI MWNAMMAG S+HGCGKEALELFS M  HGVEPNDITFISVFHACS
Subjt:  VGALDLGKWTHAYINRHGLEVDIILKTALIDMYAKCRDLKIARILFDEVTRRDISMWNAMMAGLSMHGCGKEALELFSKMESHGVEPNDITFISVFHACS

Query:  HSGLLPEGKKHFNRMVHDFGIVPKIEHYGCLVDFLGRAGHLDEAYNIIQNMPMRPNTIIWIGVLCLLHVSLYKNLALGEVAARKILELDPQNCGYNVLKS
        HSGL+ EG KHF+RMVH+FGIVPKIEHYGCLVD LGRA  LD A++II+NMPMRPNTI+W G L L    L+KNLALGEVAARKILELDP+NCGY VLKS
Subjt:  HSGLLPEGKKHFNRMVHDFGIVPKIEHYGCLVDFLGRAGHLDEAYNIIQNMPMRPNTIIWIGVLCLLHVSLYKNLALGEVAARKILELDPQNCGYNVLKS

Query:  NIYASARRWTDVTSIRETMNNLGMKKEPGLSWIEV
        NIYAS +RWTDVTS+RETM++LGMKKEPGLSWIEV
Subjt:  NIYASARRWTDVTSIRETMNNLGMKKEPGLSWIEV

SwissProt top hitse value%identityAlignment
O23337 Pentatricopeptide repeat-containing protein At4g148209.1e-5945.38Show/hide
Query:  AYLGVGALDLGKWTHAYINRHGLEVDIILKTALIDMYAKCRDLKIARILFDEVTRRDISMWNAMMAGLSMHGCGKEALELFSKMESHGVEPNDITFISVF
        A   +G LD  KW H+ I+ +GLE ++ +  ALI+MYAKC  L   R +F+++ RR++  W++M+  LSMHG   +AL LF++M+   VEPN++TF+ V 
Subjt:  AYLGVGALDLGKWTHAYINRHGLEVDIILKTALIDMYAKCRDLKIARILFDEVTRRDISMWNAMMAGLSMHGCGKEALELFSKMESHGVEPNDITFISVF

Query:  HACSHSGLLPEGKKHFNRMVHDFGIVPKIEHYGCLVDFLGRAGHLDEAYNIIQNMPMRPNTIIWIGVLCLLHVSLYKNLALGEVAARKILELDPQNCGYN
        + CSHSGL+ EGKK F  M  ++ I PK+EHYGC+VD  GRA  L EA  +I++MP+  N +IW  ++    +  +  L LG+ AA++ILEL+P + G  
Subjt:  HACSHSGLLPEGKKHFNRMVHDFGIVPKIEHYGCLVDFLGRAGHLDEAYNIIQNMPMRPNTIIWIGVLCLLHVSLYKNLALGEVAARKILELDPQNCGYN

Query:  VLKSNIYASARRWTDVTSIRETMNNLGMKKEPGLSWIE
        VL SNIYA  +RW DV +IR  M    + KE GLS I+
Subjt:  VLKSNIYASARRWTDVTSIRETMNNLGMKKEPGLSWIE

O82380 Pentatricopeptide repeat-containing protein At2g29760, chloroplastic1.4e-6447.26Show/hide
Query:  VGALDLGKWTHAYINRHGLEVDIILKTALIDMYAKCRDLKIARILFDEVTRRDISMWNAMMAGLSMHGCGKEALELFSKMESHGVEPNDITFISVFHACS
        VGAL+LG+W H+YI +HG+ ++  + +ALI MY+KC DL+ +R +F+ V +RD+ +W+AM+ GL+MHGCG EA+++F KM+   V+PN +TF +VF ACS
Subjt:  VGALDLGKWTHAYINRHGLEVDIILKTALIDMYAKCRDLKIARILFDEVTRRDISMWNAMMAGLSMHGCGKEALELFSKMESHGVEPNDITFISVFHACS

Query:  HSGLLPEGKKHFNRMVHDFGIVPKIEHYGCLVDFLGRAGHLDEAYNIIQNMPMRPNTIIWIGVL--CLLHVSLYKNLALGEVAARKILELDPQNCGYNVL
        H+GL+ E +  F++M  ++GIVP+ +HY C+VD LGR+G+L++A   I+ MP+ P+T +W  +L  C +H     NL L E+A  ++LEL+P+N G +VL
Subjt:  HSGLLPEGKKHFNRMVHDFGIVPKIEHYGCLVDFLGRAGHLDEAYNIIQNMPMRPNTIIWIGVL--CLLHVSLYKNLALGEVAARKILELDPQNCGYNVL

Query:  KSNIYASARRWTDVTSIRETMNNLGMKKEPGLSWIEV
         SNIYA   +W +V+ +R+ M   G+KKEPG S IE+
Subjt:  KSNIYASARRWTDVTSIRETMNNLGMKKEPGLSWIEV

Q9FND7 Putative pentatricopeptide repeat-containing protein At5g404051.1e-6146.19Show/hide
Query:  VGALDLGKWTHAYINRHGLEVDIILKTALIDMYAKCRDLKIARILFDEVTRRDISMWNAMMAGLSMHGCGKEALELFSKMESHGVEPNDITFISVFHACS
        +GALD G+W H+YI R+ +++ + L T L+D+YAKC D++ A  +F  +  +++  W++ + GL+M+G G++ LELFS M+  GV PN +TF+SV   CS
Subjt:  VGALDLGKWTHAYINRHGLEVDIILKTALIDMYAKCRDLKIARILFDEVTRRDISMWNAMMAGLSMHGCGKEALELFSKMESHGVEPNDITFISVFHACS

Query:  HSGLLPEGKKHFNRMVHDFGIVPKIEHYGCLVDFLGRAGHLDEAYNIIQNMPMRPNTIIWIGVLCLLHVS-LYKNLALGEVAARKILELDPQNCGYNVLK
          G + EG++HF+ M ++FGI P++EHYGCLVD   RAG L++A +IIQ MPM+P+  +W     LLH S +YKNL LG +A++K+LEL+  N G  VL 
Subjt:  HSGLLPEGKKHFNRMVHDFGIVPKIEHYGCLVDFLGRAGHLDEAYNIIQNMPMRPNTIIWIGVLCLLHVS-LYKNLALGEVAARKILELDPQNCGYNVLK

Query:  SNIYASARRWTDVTSIRETMNNLGMKKEPGLSWIEV
        SNIYA +  W +V+ +R++M + G++K+PG S +EV
Subjt:  SNIYASARRWTDVTSIRETMNNLGMKKEPGLSWIEV

Q9LW32 Pentatricopeptide repeat-containing protein At3g26782, mitochondrial8.8e-6248.72Show/hide
Query:  GALDLGKWTHAYINRHGLEVDIILKTALIDMYAKCRDLKIARILFDEVTRRDISMWNAMMAGLSMHGCGKEALELFSKMESHGVEPNDITFISVFHACSH
        GAL +GK  H  + R GLE D+I+ T++IDMY KC  ++ AR  FD +  +++  W AM+AG  MHG   +ALELF  M   GV PN ITF+SV  ACSH
Subjt:  GALDLGKWTHAYINRHGLEVDIILKTALIDMYAKCRDLKIARILFDEVTRRDISMWNAMMAGLSMHGCGKEALELFSKMESHGVEPNDITFISVFHACSH

Query:  SGLLPEGKKHFNRMVHDFGIVPKIEHYGCLVDFLGRAGHLDEAYNIIQNMPMRPNTIIWIGVLCLLHVSLYKNLALGEVAARKILELDPQNCGYNVLKSN
        +GL  EG + FN M   FG+ P +EHYGC+VD LGRAG L +AY++IQ M M+P++IIW  +L    +  +KN+ L E++  ++ ELD  NCGY +L S+
Subjt:  SGLLPEGKKHFNRMVHDFGIVPKIEHYGCLVDFLGRAGHLDEAYNIIQNMPMRPNTIIWIGVLCLLHVSLYKNLALGEVAARKILELDPQNCGYNVLKSN

Query:  IYASARRWTDVTSIRETMNNLGMKKEPGLSWIEV
        IYA A RW DV  +R  M N G+ K PG S +E+
Subjt:  IYASARRWTDVTSIRETMNNLGMKKEPGLSWIEV

Q9SN39 Pentatricopeptide repeat-containing protein DOT4, chloroplastic4.4e-6144.58Show/hide
Query:  AYLGVGALDLGKWTHAYINRHGLEVDIILKTALIDMYAKCRDLKIARILFDEVTRRDISMWNAMMAGLSMHGCGKEALELFSKMESHGVEPNDITFISVF
        A   + A D G+  H YI R+G   D  +  +L+DMYAKC  L +A +LFD++  +D+  W  M+AG  MHG GKEA+ LF++M   G+E ++I+F+S+ 
Subjt:  AYLGVGALDLGKWTHAYINRHGLEVDIILKTALIDMYAKCRDLKIARILFDEVTRRDISMWNAMMAGLSMHGCGKEALELFSKMESHGVEPNDITFISVF

Query:  HACSHSGLLPEGKKHFNRMVHDFGIVPKIEHYGCLVDFLGRAGHLDEAYNIIQNMPMRPNTIIWIGVLCLLHVSLYKNLALGEVAARKILELDPQNCGYN
        +ACSHSGL+ EG + FN M H+  I P +EHY C+VD L R G L +AY  I+NMP+ P+  IW  +LC     ++ ++ L E  A K+ EL+P+N GY 
Subjt:  HACSHSGLLPEGKKHFNRMVHDFGIVPKIEHYGCLVDFLGRAGHLDEAYNIIQNMPMRPNTIIWIGVLCLLHVSLYKNLALGEVAARKILELDPQNCGYN

Query:  VLKSNIYASARRWTDVTSIRETMNNLGMKKEPGLSWIEVK
        VL +NIYA A +W  V  +R+ +   G++K PG SWIE+K
Subjt:  VLKSNIYASARRWTDVTSIRETMNNLGMKKEPGLSWIEVK

Arabidopsis top hitse value%identityAlignment
AT2G29760.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.0e-6547.26Show/hide
Query:  VGALDLGKWTHAYINRHGLEVDIILKTALIDMYAKCRDLKIARILFDEVTRRDISMWNAMMAGLSMHGCGKEALELFSKMESHGVEPNDITFISVFHACS
        VGAL+LG+W H+YI +HG+ ++  + +ALI MY+KC DL+ +R +F+ V +RD+ +W+AM+ GL+MHGCG EA+++F KM+   V+PN +TF +VF ACS
Subjt:  VGALDLGKWTHAYINRHGLEVDIILKTALIDMYAKCRDLKIARILFDEVTRRDISMWNAMMAGLSMHGCGKEALELFSKMESHGVEPNDITFISVFHACS

Query:  HSGLLPEGKKHFNRMVHDFGIVPKIEHYGCLVDFLGRAGHLDEAYNIIQNMPMRPNTIIWIGVL--CLLHVSLYKNLALGEVAARKILELDPQNCGYNVL
        H+GL+ E +  F++M  ++GIVP+ +HY C+VD LGR+G+L++A   I+ MP+ P+T +W  +L  C +H     NL L E+A  ++LEL+P+N G +VL
Subjt:  HSGLLPEGKKHFNRMVHDFGIVPKIEHYGCLVDFLGRAGHLDEAYNIIQNMPMRPNTIIWIGVL--CLLHVSLYKNLALGEVAARKILELDPQNCGYNVL

Query:  KSNIYASARRWTDVTSIRETMNNLGMKKEPGLSWIEV
         SNIYA   +W +V+ +R+ M   G+KKEPG S IE+
Subjt:  KSNIYASARRWTDVTSIRETMNNLGMKKEPGLSWIEV

AT3G26782.1 Tetratricopeptide repeat (TPR)-like superfamily protein6.2e-6348.72Show/hide
Query:  GALDLGKWTHAYINRHGLEVDIILKTALIDMYAKCRDLKIARILFDEVTRRDISMWNAMMAGLSMHGCGKEALELFSKMESHGVEPNDITFISVFHACSH
        GAL +GK  H  + R GLE D+I+ T++IDMY KC  ++ AR  FD +  +++  W AM+AG  MHG   +ALELF  M   GV PN ITF+SV  ACSH
Subjt:  GALDLGKWTHAYINRHGLEVDIILKTALIDMYAKCRDLKIARILFDEVTRRDISMWNAMMAGLSMHGCGKEALELFSKMESHGVEPNDITFISVFHACSH

Query:  SGLLPEGKKHFNRMVHDFGIVPKIEHYGCLVDFLGRAGHLDEAYNIIQNMPMRPNTIIWIGVLCLLHVSLYKNLALGEVAARKILELDPQNCGYNVLKSN
        +GL  EG + FN M   FG+ P +EHYGC+VD LGRAG L +AY++IQ M M+P++IIW  +L    +  +KN+ L E++  ++ ELD  NCGY +L S+
Subjt:  SGLLPEGKKHFNRMVHDFGIVPKIEHYGCLVDFLGRAGHLDEAYNIIQNMPMRPNTIIWIGVLCLLHVSLYKNLALGEVAARKILELDPQNCGYNVLKSN

Query:  IYASARRWTDVTSIRETMNNLGMKKEPGLSWIEV
        IYA A RW DV  +R  M N G+ K PG S +E+
Subjt:  IYASARRWTDVTSIRETMNNLGMKKEPGLSWIEV

AT4G14820.1 Pentatricopeptide repeat (PPR) superfamily protein6.4e-6045.38Show/hide
Query:  AYLGVGALDLGKWTHAYINRHGLEVDIILKTALIDMYAKCRDLKIARILFDEVTRRDISMWNAMMAGLSMHGCGKEALELFSKMESHGVEPNDITFISVF
        A   +G LD  KW H+ I+ +GLE ++ +  ALI+MYAKC  L   R +F+++ RR++  W++M+  LSMHG   +AL LF++M+   VEPN++TF+ V 
Subjt:  AYLGVGALDLGKWTHAYINRHGLEVDIILKTALIDMYAKCRDLKIARILFDEVTRRDISMWNAMMAGLSMHGCGKEALELFSKMESHGVEPNDITFISVF

Query:  HACSHSGLLPEGKKHFNRMVHDFGIVPKIEHYGCLVDFLGRAGHLDEAYNIIQNMPMRPNTIIWIGVLCLLHVSLYKNLALGEVAARKILELDPQNCGYN
        + CSHSGL+ EGKK F  M  ++ I PK+EHYGC+VD  GRA  L EA  +I++MP+  N +IW  ++    +  +  L LG+ AA++ILEL+P + G  
Subjt:  HACSHSGLLPEGKKHFNRMVHDFGIVPKIEHYGCLVDFLGRAGHLDEAYNIIQNMPMRPNTIIWIGVLCLLHVSLYKNLALGEVAARKILELDPQNCGYN

Query:  VLKSNIYASARRWTDVTSIRETMNNLGMKKEPGLSWIE
        VL SNIYA  +RW DV +IR  M    + KE GLS I+
Subjt:  VLKSNIYASARRWTDVTSIRETMNNLGMKKEPGLSWIE

AT4G18750.1 Pentatricopeptide repeat (PPR) superfamily protein3.1e-6244.58Show/hide
Query:  AYLGVGALDLGKWTHAYINRHGLEVDIILKTALIDMYAKCRDLKIARILFDEVTRRDISMWNAMMAGLSMHGCGKEALELFSKMESHGVEPNDITFISVF
        A   + A D G+  H YI R+G   D  +  +L+DMYAKC  L +A +LFD++  +D+  W  M+AG  MHG GKEA+ LF++M   G+E ++I+F+S+ 
Subjt:  AYLGVGALDLGKWTHAYINRHGLEVDIILKTALIDMYAKCRDLKIARILFDEVTRRDISMWNAMMAGLSMHGCGKEALELFSKMESHGVEPNDITFISVF

Query:  HACSHSGLLPEGKKHFNRMVHDFGIVPKIEHYGCLVDFLGRAGHLDEAYNIIQNMPMRPNTIIWIGVLCLLHVSLYKNLALGEVAARKILELDPQNCGYN
        +ACSHSGL+ EG + FN M H+  I P +EHY C+VD L R G L +AY  I+NMP+ P+  IW  +LC     ++ ++ L E  A K+ EL+P+N GY 
Subjt:  HACSHSGLLPEGKKHFNRMVHDFGIVPKIEHYGCLVDFLGRAGHLDEAYNIIQNMPMRPNTIIWIGVLCLLHVSLYKNLALGEVAARKILELDPQNCGYN

Query:  VLKSNIYASARRWTDVTSIRETMNNLGMKKEPGLSWIEVK
        VL +NIYA A +W  V  +R+ +   G++K PG SWIE+K
Subjt:  VLKSNIYASARRWTDVTSIRETMNNLGMKKEPGLSWIEVK

AT5G40405.1 Tetratricopeptide repeat (TPR)-like superfamily protein8.1e-6346.19Show/hide
Query:  VGALDLGKWTHAYINRHGLEVDIILKTALIDMYAKCRDLKIARILFDEVTRRDISMWNAMMAGLSMHGCGKEALELFSKMESHGVEPNDITFISVFHACS
        +GALD G+W H+YI R+ +++ + L T L+D+YAKC D++ A  +F  +  +++  W++ + GL+M+G G++ LELFS M+  GV PN +TF+SV   CS
Subjt:  VGALDLGKWTHAYINRHGLEVDIILKTALIDMYAKCRDLKIARILFDEVTRRDISMWNAMMAGLSMHGCGKEALELFSKMESHGVEPNDITFISVFHACS

Query:  HSGLLPEGKKHFNRMVHDFGIVPKIEHYGCLVDFLGRAGHLDEAYNIIQNMPMRPNTIIWIGVLCLLHVS-LYKNLALGEVAARKILELDPQNCGYNVLK
          G + EG++HF+ M ++FGI P++EHYGCLVD   RAG L++A +IIQ MPM+P+  +W     LLH S +YKNL LG +A++K+LEL+  N G  VL 
Subjt:  HSGLLPEGKKHFNRMVHDFGIVPKIEHYGCLVDFLGRAGHLDEAYNIIQNMPMRPNTIIWIGVLCLLHVS-LYKNLALGEVAARKILELDPQNCGYNVLK

Query:  SNIYASARRWTDVTSIRETMNNLGMKKEPGLSWIEV
        SNIYA +  W +V+ +R++M + G++K+PG S +EV
Subjt:  SNIYASARRWTDVTSIRETMNNLGMKKEPGLSWIEV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGATCGGGTAGCCTATCTAGGGGTTGGAGCCCTTGACCTTGGCAAGTGGACTCATGCTTACATAAACCGTCATGGCCTTGAAGTAGACATTATTCTAAAAACGGC
TCTTATCGACATGTATGCCAAATGTAGAGACCTAAAAATTGCTCGTATCCTGTTCGATGAAGTCACACGACGGGATATCAGCATGTGGAATGCAATGATGGCTGGATTGT
CGATGCATGGTTGTGGAAAAGAAGCTTTAGAACTCTTTTCAAAGATGGAGAGCCATGGTGTTGAACCCAATGATATCACATTCATTTCAGTATTTCACGCTTGTAGCCAT
TCTGGATTGTTACCAGAAGGGAAGAAGCATTTCAACAGAATGGTTCATGACTTTGGAATTGTTCCAAAGATCGAGCACTATGGATGCTTGGTGGATTTTCTCGGTCGAGC
TGGACATCTCGACGAAGCTTACAACATCATTCAAAACATGCCCATGAGGCCTAACACAATTATATGGATTGGGGTGCTCTGCTTGCTGCATGTAAGCTTATATAAGAATC
TGGCCTTGGGGGAGGTGGCTGCAAGAAAGATTCTTGAATTGGACCCCCAAAATTGTGGATACAATGTTCTTAAATCAAACATCTATGCATCTGCAAGGAGATGGACTGAT
GTAACAAGCATTAGAGAAACAATGAACAATTTAGGAATGAAGAAAGAACCAGGACTCAGCTGGATTGAAGTTAAATGGTTCAGTTCACCACTTCAAATCTGGAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGATCGGGTAGCCTATCTAGGGGTTGGAGCCCTTGACCTTGGCAAGTGGACTCATGCTTACATAAACCGTCATGGCCTTGAAGTAGACATTATTCTAAAAACGGC
TCTTATCGACATGTATGCCAAATGTAGAGACCTAAAAATTGCTCGTATCCTGTTCGATGAAGTCACACGACGGGATATCAGCATGTGGAATGCAATGATGGCTGGATTGT
CGATGCATGGTTGTGGAAAAGAAGCTTTAGAACTCTTTTCAAAGATGGAGAGCCATGGTGTTGAACCCAATGATATCACATTCATTTCAGTATTTCACGCTTGTAGCCAT
TCTGGATTGTTACCAGAAGGGAAGAAGCATTTCAACAGAATGGTTCATGACTTTGGAATTGTTCCAAAGATCGAGCACTATGGATGCTTGGTGGATTTTCTCGGTCGAGC
TGGACATCTCGACGAAGCTTACAACATCATTCAAAACATGCCCATGAGGCCTAACACAATTATATGGATTGGGGTGCTCTGCTTGCTGCATGTAAGCTTATATAAGAATC
TGGCCTTGGGGGAGGTGGCTGCAAGAAAGATTCTTGAATTGGACCCCCAAAATTGTGGATACAATGTTCTTAAATCAAACATCTATGCATCTGCAAGGAGATGGACTGAT
GTAACAAGCATTAGAGAAACAATGAACAATTTAGGAATGAAGAAAGAACCAGGACTCAGCTGGATTGAAGTTAAATGGTTCAGTTCACCACTTCAAATCTGGAAATAA
Protein sequenceShow/hide protein sequence
MEDRVAYLGVGALDLGKWTHAYINRHGLEVDIILKTALIDMYAKCRDLKIARILFDEVTRRDISMWNAMMAGLSMHGCGKEALELFSKMESHGVEPNDITFISVFHACSH
SGLLPEGKKHFNRMVHDFGIVPKIEHYGCLVDFLGRAGHLDEAYNIIQNMPMRPNTIIWIGVLCLLHVSLYKNLALGEVAARKILELDPQNCGYNVLKSNIYASARRWTD
VTSIRETMNNLGMKKEPGLSWIEVKWFSSPLQIWK