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Spg002214 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg002214
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase
Genome locationscaffold1:30958108..30961883
RNA-Seq ExpressionSpg002214
SyntenySpg002214
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149380.1 uncharacterized protein LOC111017810 [Momordica charantia]4.1e-3148.45Show/hide
Query:  ENVEYAAGA--QQGANPPPPPVIPQFIRDFKRYGPPRFDGRSEEATTAEQWIADLEAMYDYLDCEDRLKVRGAIFMLRDKARMWGNLWKPLRNLKMSNMS
        +N   A GA  QQ      P    QFIRDFKR+GPP F+G SE  T AE+W+ +LEA+Y YL C +  KVRGA+FMLR +A  W         L    ++
Subjt:  ENVEYAAGA--QQGANPPPPPVIPQFIRDFKRYGPPRFDGRSEEATTAEQWIADLEAMYDYLDCEDRLKVRGAIFMLRDKARMWGNLWKPLRNLKMSNMS

Query:  VVQCERKFTEHLRFAPDLVSTPERKIKRFIRGLREEIRGSVALKEPTTFAAVLKGALIMDK
        V Q E KFTE  RF    + T + KI +FI GLR EI+G + LKEPTT+AA ++ AL+MDK
Subjt:  VVQCERKFTEHLRFAPDLVSTPERKIKRFIRGLREEIRGSVALKEPTTFAAVLKGALIMDK

XP_022151688.1 uncharacterized protein LOC111019603 [Momordica charantia]2.2e-3243.52Show/hide
Query:  AAGAQQGANPPPPPVI---PQFIRDFKRYGPPRFDGRSEEATTAEQWIADLEAMYDYLDCEDRLKVRGAIFMLRDKARMWGNL-------------WKPL
        AAGA Q   P     +    QFIRDF+RYGPP F+G SE+AT  E+WI +LEA+Y YL C D+LKV+GA+FMLR +A  W ++             W   
Subjt:  AAGAQQGANPPPPPVI---PQFIRDFKRYGPPRFDGRSEEATTAEQWIADLEAMYDYLDCEDRLKVRGAIFMLRDKARMWGNL-------------WKPL

Query:  R---------------------NLKMSNMSVVQCERKFTEHLRFAPDLVSTPERKIKRFIRGLREEIRGSVALKEPTTFAAVLKGALIMDKNV
        +                     +L    + V Q E+KFTE  RFA DL+ T  RKIKRF+RGL + I+G + L+ PTT+A  +KGAL+MDK+V
Subjt:  R---------------------NLKMSNMSVVQCERKFTEHLRFAPDLVSTPERKIKRFIRGLREEIRGSVALKEPTTFAAVLKGALIMDKNV

XP_022155000.1 uncharacterized protein LOC111022144 [Momordica charantia]7.7e-3045.35Show/hide
Query:  FIRDFKRYGPPRFDGRSEEATTAEQWIADLEAMYDYLDCEDRLKVRGAIFMLRDKARMW----------GNLWKPLRNLK--------------------
        FI+DFKRYGPP FDG SE AT AE+WI +LEA Y YL CED+ KV+GA+FMLR +A  W           N+  P    K                    
Subjt:  FIRDFKRYGPPRFDGRSEEATTAEQWIADLEAMYDYLDCEDRLKVRGAIFMLRDKARMW----------GNLWKPLRNLK--------------------

Query:  ----MSNMSVVQCERKFTEHLRFAPDLVSTPERKIKRFIRGLREEIRGSVALKEPTTFAAVLKGALIMDKNV
               +SV Q ERKFTE  RFA +L+     KIKRF++GL + IRG V L+ P ++A  ++GALIMDK+V
Subjt:  ----MSNMSVVQCERKFTEHLRFAPDLVSTPERKIKRFIRGLREEIRGSVALKEPTTFAAVLKGALIMDKNV

XP_022156326.1 uncharacterized protein LOC111023247 [Momordica charantia]3.3e-3344.9Show/hide
Query:  AAGAQQGANPPPPPVI--PQ----FIRDFKRYGPPRFDGRSEEATTAEQWIADLEAMYDYLDCEDRLKVRGAIFMLRDKARMWGNL-------------W
        A G   G   PPP  +  PQ    FI+DFKRYGPP FDG SE AT  E+WI +LEA+Y YL CED+ KV+GA+FMLR +A  W +              W
Subjt:  AAGAQQGANPPPPPVI--PQ----FIRDFKRYGPPRFDGRSEEATTAEQWIADLEAMYDYLDCEDRLKVRGAIFMLRDKARMWGNL-------------W

Query:  KPLRN---------------------LKMSNMSVVQCERKFTEHLRFAPDLVSTPERKIKRFIRGLREEIRGSVALKEPTTFAAVLKGALIMDKNV
           +N                     L    +SV Q ERKFTE  RFA +L+ T   KIKRF++GLR+ IRG V L+ PTT+A  ++GAL+MDK+V
Subjt:  KPLRN---------------------LKMSNMSVVQCERKFTEHLRFAPDLVSTPERKIKRFIRGLREEIRGSVALKEPTTFAAVLKGALIMDKNV

XP_022156546.1 uncharacterized protein LOC111023424 [Momordica charantia]4.5e-3041.41Show/hide
Query:  VEYAAGAQQGANPPP-----PPVIPQFIRDFKRYGPPRFDGRSEEATTAEQWIADLEAMYDYLDCEDRLKVRGAIFMLRDKARMWGNL------------
        +   AG       PP     P    QFI+DFKRYGPP F G SE AT AE+W+ +LEA+Y YL CED+ KV+GA+FMLR +A  W +             
Subjt:  VEYAAGAQQGANPPP-----PPVIPQFIRDFKRYGPPRFDGRSEEATTAEQWIADLEAMYDYLDCEDRLKVRGAIFMLRDKARMWGNL------------

Query:  -WKPLRN---------------------LKMSNMSVVQCERKFTEHLRFAPDLVSTPERKIKRFIRGLREEIRGSVALKEPTTFAAVLKGALIMDKNV
         W   +N                     L    ++V Q ERKFTE   FA +L+ T   KIKRF++GL + IRGSV L+ P T+A  ++G LIMDK+V
Subjt:  -WKPLRN---------------------LKMSNMSVVQCERKFTEHLRFAPDLVSTPERKIKRFIRGLREEIRGSVALKEPTTFAAVLKGALIMDKNV

TrEMBL top hitse value%identityAlignment
A0A6J1D5J7 uncharacterized protein LOC1110178102.0e-3148.45Show/hide
Query:  ENVEYAAGA--QQGANPPPPPVIPQFIRDFKRYGPPRFDGRSEEATTAEQWIADLEAMYDYLDCEDRLKVRGAIFMLRDKARMWGNLWKPLRNLKMSNMS
        +N   A GA  QQ      P    QFIRDFKR+GPP F+G SE  T AE+W+ +LEA+Y YL C +  KVRGA+FMLR +A  W         L    ++
Subjt:  ENVEYAAGA--QQGANPPPPPVIPQFIRDFKRYGPPRFDGRSEEATTAEQWIADLEAMYDYLDCEDRLKVRGAIFMLRDKARMWGNLWKPLRNLKMSNMS

Query:  VVQCERKFTEHLRFAPDLVSTPERKIKRFIRGLREEIRGSVALKEPTTFAAVLKGALIMDK
        V Q E KFTE  RF    + T + KI +FI GLR EI+G + LKEPTT+AA ++ AL+MDK
Subjt:  VVQCERKFTEHLRFAPDLVSTPERKIKRFIRGLREEIRGSVALKEPTTFAAVLKGALIMDK

A0A6J1DCW8 uncharacterized protein LOC1110196031.0e-3243.52Show/hide
Query:  AAGAQQGANPPPPPVI---PQFIRDFKRYGPPRFDGRSEEATTAEQWIADLEAMYDYLDCEDRLKVRGAIFMLRDKARMWGNL-------------WKPL
        AAGA Q   P     +    QFIRDF+RYGPP F+G SE+AT  E+WI +LEA+Y YL C D+LKV+GA+FMLR +A  W ++             W   
Subjt:  AAGAQQGANPPPPPVI---PQFIRDFKRYGPPRFDGRSEEATTAEQWIADLEAMYDYLDCEDRLKVRGAIFMLRDKARMWGNL-------------WKPL

Query:  R---------------------NLKMSNMSVVQCERKFTEHLRFAPDLVSTPERKIKRFIRGLREEIRGSVALKEPTTFAAVLKGALIMDKNV
        +                     +L    + V Q E+KFTE  RFA DL+ T  RKIKRF+RGL + I+G + L+ PTT+A  +KGAL+MDK+V
Subjt:  R---------------------NLKMSNMSVVQCERKFTEHLRFAPDLVSTPERKIKRFIRGLREEIRGSVALKEPTTFAAVLKGALIMDKNV

A0A6J1DL73 uncharacterized protein LOC1110221443.7e-3045.35Show/hide
Query:  FIRDFKRYGPPRFDGRSEEATTAEQWIADLEAMYDYLDCEDRLKVRGAIFMLRDKARMW----------GNLWKPLRNLK--------------------
        FI+DFKRYGPP FDG SE AT AE+WI +LEA Y YL CED+ KV+GA+FMLR +A  W           N+  P    K                    
Subjt:  FIRDFKRYGPPRFDGRSEEATTAEQWIADLEAMYDYLDCEDRLKVRGAIFMLRDKARMW----------GNLWKPLRNLK--------------------

Query:  ----MSNMSVVQCERKFTEHLRFAPDLVSTPERKIKRFIRGLREEIRGSVALKEPTTFAAVLKGALIMDKNV
               +SV Q ERKFTE  RFA +L+     KIKRF++GL + IRG V L+ P ++A  ++GALIMDK+V
Subjt:  ----MSNMSVVQCERKFTEHLRFAPDLVSTPERKIKRFIRGLREEIRGSVALKEPTTFAAVLKGALIMDKNV

A0A6J1DUM2 uncharacterized protein LOC1110232471.6e-3344.9Show/hide
Query:  AAGAQQGANPPPPPVI--PQ----FIRDFKRYGPPRFDGRSEEATTAEQWIADLEAMYDYLDCEDRLKVRGAIFMLRDKARMWGNL-------------W
        A G   G   PPP  +  PQ    FI+DFKRYGPP FDG SE AT  E+WI +LEA+Y YL CED+ KV+GA+FMLR +A  W +              W
Subjt:  AAGAQQGANPPPPPVI--PQ----FIRDFKRYGPPRFDGRSEEATTAEQWIADLEAMYDYLDCEDRLKVRGAIFMLRDKARMWGNL-------------W

Query:  KPLRN---------------------LKMSNMSVVQCERKFTEHLRFAPDLVSTPERKIKRFIRGLREEIRGSVALKEPTTFAAVLKGALIMDKNV
           +N                     L    +SV Q ERKFTE  RFA +L+ T   KIKRF++GLR+ IRG V L+ PTT+A  ++GAL+MDK+V
Subjt:  KPLRN---------------------LKMSNMSVVQCERKFTEHLRFAPDLVSTPERKIKRFIRGLREEIRGSVALKEPTTFAAVLKGALIMDKNV

A0A6J1DVA0 uncharacterized protein LOC1110234242.2e-3041.41Show/hide
Query:  VEYAAGAQQGANPPP-----PPVIPQFIRDFKRYGPPRFDGRSEEATTAEQWIADLEAMYDYLDCEDRLKVRGAIFMLRDKARMWGNL------------
        +   AG       PP     P    QFI+DFKRYGPP F G SE AT AE+W+ +LEA+Y YL CED+ KV+GA+FMLR +A  W +             
Subjt:  VEYAAGAQQGANPPP-----PPVIPQFIRDFKRYGPPRFDGRSEEATTAEQWIADLEAMYDYLDCEDRLKVRGAIFMLRDKARMWGNL------------

Query:  -WKPLRN---------------------LKMSNMSVVQCERKFTEHLRFAPDLVSTPERKIKRFIRGLREEIRGSVALKEPTTFAAVLKGALIMDKNV
         W   +N                     L    ++V Q ERKFTE   FA +L+ T   KIKRF++GL + IRGSV L+ P T+A  ++G LIMDK+V
Subjt:  -WKPLRN---------------------LKMSNMSVVQCERKFTEHLRFAPDLVSTPERKIKRFIRGLREEIRGSVALKEPTTFAAVLKGALIMDKNV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAACGTTATCAAACGAGCCCTATGTTTTGAGGAGTAGGTGTGTTTGGTCTTGTTTCACGCGCAACCGCAACCATCTCGGCGTACCGCCACCGCTTCTCCTTTTCCC
CCTCGCTTCAAGTCGTGTGACGACCCTACAGCCCGAGTGCTCTGCACGAGATCGGCCAGTCGCGAGCGAGCCTGTGCTCAGGCCCACTCGAACTCAACAAGGAATCGCAT
TGAGTCGCATCCCTTCAGCCTTCCTTGCGCGTGATCTGAGTTTCCAGCCAGCTACAAGTTCGTCTTCTTCTTCCGTTCGTTTGATCGTGAAGTCATCGGGTAGTAATATG
GCCAAGGGGGATGCACAGTTCGAGGCCTTGGGTAATATGGTCAAGGGTCGAACGCTGAGTGCCGTAGAGAAATGTCGAGGCCCTGGGCAGGAGAACGTAGAATATGCGGC
TGGAGCTCAACAAGGAGCAAACCCTCCTCCACCTCCTGTCATTCCTCAGTTCATCAGAGATTTTAAGCGCTATGGACCTCCAAGGTTTGATGGTCGTTCAGAGGAAGCCA
CTACGGCAGAGCAGTGGATCGCAGACCTTGAAGCCATGTACGACTACCTGGATTGTGAAGATCGTTTGAAGGTAAGAGGAGCAATCTTCATGCTCCGAGATAAAGCTCGG
ATGTGGGGAAATCTATGGAAGCCTCTGAGGAATTTGAAGATGAGCAACATGTCAGTGGTCCAATGTGAGAGGAAGTTTACAGAACATTTGCGATTCGCTCCGGACCTGGT
CAGCACTCCTGAGCGGAAGATTAAAAGGTTTATCAGAGGCTTGAGAGAGGAGATTCGAGGCTCAGTGGCCCTGAAAGAGCCTACCACATTTGCCGCAGTGCTCAAGGGCG
CTTTGATTATGGATAAGAATGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAACGTTATCAAACGAGCCCTATGTTTTGAGGAGTAGGTGTGTTTGGTCTTGTTTCACGCGCAACCGCAACCATCTCGGCGTACCGCCACCGCTTCTCCTTTTCCC
CCTCGCTTCAAGTCGTGTGACGACCCTACAGCCCGAGTGCTCTGCACGAGATCGGCCAGTCGCGAGCGAGCCTGTGCTCAGGCCCACTCGAACTCAACAAGGAATCGCAT
TGAGTCGCATCCCTTCAGCCTTCCTTGCGCGTGATCTGAGTTTCCAGCCAGCTACAAGTTCGTCTTCTTCTTCCGTTCGTTTGATCGTGAAGTCATCGGGTAGTAATATG
GCCAAGGGGGATGCACAGTTCGAGGCCTTGGGTAATATGGTCAAGGGTCGAACGCTGAGTGCCGTAGAGAAATGTCGAGGCCCTGGGCAGGAGAACGTAGAATATGCGGC
TGGAGCTCAACAAGGAGCAAACCCTCCTCCACCTCCTGTCATTCCTCAGTTCATCAGAGATTTTAAGCGCTATGGACCTCCAAGGTTTGATGGTCGTTCAGAGGAAGCCA
CTACGGCAGAGCAGTGGATCGCAGACCTTGAAGCCATGTACGACTACCTGGATTGTGAAGATCGTTTGAAGGTAAGAGGAGCAATCTTCATGCTCCGAGATAAAGCTCGG
ATGTGGGGAAATCTATGGAAGCCTCTGAGGAATTTGAAGATGAGCAACATGTCAGTGGTCCAATGTGAGAGGAAGTTTACAGAACATTTGCGATTCGCTCCGGACCTGGT
CAGCACTCCTGAGCGGAAGATTAAAAGGTTTATCAGAGGCTTGAGAGAGGAGATTCGAGGCTCAGTGGCCCTGAAAGAGCCTACCACATTTGCCGCAGTGCTCAAGGGCG
CTTTGATTATGGATAAGAATGTTTAG
Protein sequenceShow/hide protein sequence
MRTLSNEPYVLRSRCVWSCFTRNRNHLGVPPPLLLFPLASSRVTTLQPECSARDRPVASEPVLRPTRTQQGIALSRIPSAFLARDLSFQPATSSSSSSVRLIVKSSGSNM
AKGDAQFEALGNMVKGRTLSAVEKCRGPGQENVEYAAGAQQGANPPPPPVIPQFIRDFKRYGPPRFDGRSEEATTAEQWIADLEAMYDYLDCEDRLKVRGAIFMLRDKAR
MWGNLWKPLRNLKMSNMSVVQCERKFTEHLRFAPDLVSTPERKIKRFIRGLREEIRGSVALKEPTTFAAVLKGALIMDKNV