; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg002237 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg002237
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold1:31672223..31675877
RNA-Seq ExpressionSpg002237
SyntenySpg002237
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAM01179.2 Putative retroelement [Oryza sativa Japonica Group]1.8e-1824.38Show/hide
Query:  VKELIGEDGRWKEMLIKEVFSPLEAEEILNMPRCKSNNKDEIIWNEENKGKFTVKSVGFYALKLVDSESWVRVANTPTQYAFLFGDKTEWEAGDMTTQEG
        V +LI + G W    I + F P++AE ILN+        D I W+ +  G+F+V+S    A+ L   +     +          G+   W A        
Subjt:  VKELIGEDGRWKEMLIKEVFSPLEAEEILNMPRCKSNNKDEIIWNEENKGKFTVKSVGFYALKLVDSESWVRVANTPTQYAFLFGDKTEWEAGDMTTQEG

Query:  IHSFPLLGEVDECPLGPPASSSFWRGKDIWEGMRKHLDGKGTMKAVIIMWNLWNERNKCFHKKQRPDFQNTRRLIQNYLDEEEEKSKDYQKLLEDSP--V
              L + +      P S+       +   + +    +  +  ++++W +W+ RN+  H K  P    ++R I++Y+    E  +  Q   E     V
Subjt:  IHSFPLLGEVDECPLGPPASSSFWRGKDIWEGMRKHLDGKGTMKAVIIMWNLWNERNKCFHKKQRPDFQNTRRLIQNYLDEEEEKSKDYQKLLEDSP--V

Query:  TTMENQLSH---------QHWIAPAPNRWKINADASWDERSGKGGVGWLIRDSFGSLIGAGCNCIEWKWPIKFLEAKAISEGLETYIQAKAEEDEAVRPE
          ++ +L             W+ P P   K+N D S+ E  GKGG+G ++R+  G +I A C  ++        E  A  +GL   +Q        + P 
Subjt:  TTMENQLSH---------QHWIAPAPNRWKINADASWDERSGKGGVGWLIRDSFGSLIGAGCNCIEWKWPIKFLEAKAISEGLETYIQAKAEEDEAVRPE

Query:  LEVENDSLEVIQAINNTYLDLSELSLLVEEIEEMAPLARVVSFAKCSRLSNEFAHKLAHAG
        + +E D L +I    +     SEL+ L+ EI+ +    R +SF+KC R  N  +H LA+ G
Subjt:  LEVENDSLEVIQAINNTYLDLSELSLLVEEIEEMAPLARVVSFAKCSRLSNEFAHKLAHAG

ABB46931.2 retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group]1.8e-1824.38Show/hide
Query:  VKELIGEDGRWKEMLIKEVFSPLEAEEILNMPRCKSNNKDEIIWNEENKGKFTVKSVGFYALKLVDSESWVRVANTPTQYAFLFGDKTEWEAGDMTTQEG
        V +LI + G W    I + F P++AE ILN+        D I W+ +  G+F+V+S    A+ L   +     +          G+   W A        
Subjt:  VKELIGEDGRWKEMLIKEVFSPLEAEEILNMPRCKSNNKDEIIWNEENKGKFTVKSVGFYALKLVDSESWVRVANTPTQYAFLFGDKTEWEAGDMTTQEG

Query:  IHSFPLLGEVDECPLGPPASSSFWRGKDIWEGMRKHLDGKGTMKAVIIMWNLWNERNKCFHKKQRPDFQNTRRLIQNYLDEEEEKSKDYQKLLEDSP--V
              L + +      P S+       +   + +    +  +  ++++W +W+ RN+  H K  P    ++R I++Y+    E  +  Q   E     V
Subjt:  IHSFPLLGEVDECPLGPPASSSFWRGKDIWEGMRKHLDGKGTMKAVIIMWNLWNERNKCFHKKQRPDFQNTRRLIQNYLDEEEEKSKDYQKLLEDSP--V

Query:  TTMENQLSH---------QHWIAPAPNRWKINADASWDERSGKGGVGWLIRDSFGSLIGAGCNCIEWKWPIKFLEAKAISEGLETYIQAKAEEDEAVRPE
          ++ +L             W+ P P   K+N D S+ E  GKGG+G ++R+  G +I A C  ++        E  A  +GL   +Q        + P 
Subjt:  TTMENQLSH---------QHWIAPAPNRWKINADASWDERSGKGGVGWLIRDSFGSLIGAGCNCIEWKWPIKFLEAKAISEGLETYIQAKAEEDEAVRPE

Query:  LEVENDSLEVIQAINNTYLDLSELSLLVEEIEEMAPLARVVSFAKCSRLSNEFAHKLAHAG
        + +E D L +I    +     SEL+ L+ EI+ +    R +SF+KC R  N  +H LA+ G
Subjt:  LEVENDSLEVIQAINNTYLDLSELSLLVEEIEEMAPLARVVSFAKCSRLSNEFAHKLAHAG

EEE69144.1 hypothetical protein OsJ_28268 [Oryza sativa Japonica Group]2.1e-1923.73Show/hide
Query:  VKELIGEDGRWKEMLIKEVFSPLEAEEILNMPRCKSNNKDEIIWNEENKGKFTVKSVGFYALKL-----------------------------VDSESWV
        V +LI + G W    I   F P++AE ILN+       +D I W+ +  G+F+V+S    A+ L                             V   +W 
Subjt:  VKELIGEDGRWKEMLIKEVFSPLEAEEILNMPRCKSNNKDEIIWNEENKGKFTVKSVGFYALKL-----------------------------VDSESWV

Query:  RVANTPTQYAFLFGDKTEWEAGDMTTQEGIHSFPLLGEVDECPLGPPASSSFWRGKDIWEGMRKHLD-------GKGTMKAVI----------------I
         + N+ T        K + E  D+ T  G+ S  ++  +  CP            + +WE M   +          G  K ++                +
Subjt:  RVANTPTQYAFLFGDKTEWEAGDMTTQEGIHSFPLLGEVDECPLGPPASSSFWRGKDIWEGMRKHLD-------GKGTMKAVI----------------I

Query:  MWNLWNERNKCFHKKQRPDFQNTRRLIQNYL----------DEEEEKSKD-YQKLLEDSPVTTMENQLSHQHWIAPAPNRWKINADASWDERSGKGGVGW
        +W +W+ RN+  H K  P    ++R I++Y+              EK K     +L+ S       + +   W  P P   K+N D S+ E  GKGG+G 
Subjt:  MWNLWNERNKCFHKKQRPDFQNTRRLIQNYL----------DEEEEKSKD-YQKLLEDSPVTTMENQLSHQHWIAPAPNRWKINADASWDERSGKGGVGW

Query:  LIRDSFGSLIGAGCNCIEWKWPIKFLEAKAISEGLETYIQAKAEEDEAVRPELEVENDSLEVIQAINNTYLDLSELSLLVEEIEEMAPLARVVSFAKCSR
        ++R+  G +I A C  ++       +E  A  +GL   +Q        + P + +E D L ++    +     SEL+ L+ EI+ +    R +SF KC R
Subjt:  LIRDSFGSLIGAGCNCIEWKWPIKFLEAKAISEGLETYIQAKAEEDEAVRPELEVENDSLEVIQAINNTYLDLSELSLLVEEIEEMAPLARVVSFAKCSR

Query:  LSNEFAHKLAHAG
          N  +H LA+ G
Subjt:  LSNEFAHKLAHAG

XP_022156777.1 uncharacterized protein LOC111023608 [Momordica charantia]3.1e-1831.25Show/hide
Query:  KAVIIMWNLWNERNKCFHKKQRPDFQNTRRLIQNYLDEEEEKSKDY--QKLLEDSPVTTMENQLSHQHWIAPAPNRWKINADASWDERSGKGGVGWLIRD
        +++II W +W  RNK   K    + ++ + +I  Y+     +  +   +   +D  +       +   W  P  N WK+N DA+W   +  GG+GW++RD
Subjt:  KAVIIMWNLWNERNKCFHKKQRPDFQNTRRLIQNYLDEEEEKSKDY--QKLLEDSPVTTMENQLSHQHWIAPAPNRWKINADASWDERSGKGGVGWLIRD

Query:  SFGSLIGAGCNCIEWKWPIKFLEAKAISEGLETYIQ--AKAEEDEAVRPELEVENDSLEVIQAINNTYLDLSELSLLVEEIEEMAPLARVVSFAKCSRLS
          G +I A C  I  +  I +LE  AI EGL    Q   +  + E  RP + +E+DSLE I  ++    D +E+  L+EEI +M    ++VS    SR +
Subjt:  SFGSLIGAGCNCIEWKWPIKFLEAKAISEGLETYIQ--AKAEEDEAVRPELEVENDSLEVIQAINNTYLDLSELSLLVEEIEEMAPLARVVSFAKCSRLS

Query:  NEFAHKLA
        N+ AH LA
Subjt:  NEFAHKLA

XP_024042628.1 uncharacterized protein LOC112099434 [Citrus clementina]3.7e-1923.49Show/hide
Query:  VKELIGEDGRWKEMLIKEVFSPLEAEEILNMPRCKSNNKDEIIWNEENKGKFTVKSVGFYALKLVDSESWVRVANTPTQYAFLFGDKTEWEAGDMTTQEG
        V ELI  D RWKE L+ + F   +A+ I+N+P  +++++D++IW+ + KG+++VKS    ALK+   ++     N   Q   +F    E +A   T +  
Subjt:  VKELIGEDGRWKEMLIKEVFSPLEAEEILNMPRCKSNNKDEIIWNEENKGKFTVKSVGFYALKLVDSESWVRVANTPTQYAFLFGDKTEWEAGDMTTQEG

Query:  IHSFPLLGEVDECPLGPPASSSFWRGKDIWEGMRKHLDGKGTMKAVIIMWNLWNERNKCFHKKQRPDFQNTRRLIQNYLDEEEEKSKDYQKLLEDSPVTT
                E  +  +GP   +       +++ + K +         +  W +W  RNK   + ++P +Q +    +  L+        YQ++     +  
Subjt:  IHSFPLLGEVDECPLGPPASSSFWRGKDIWEGMRKHLDGKGTMKAVIIMWNLWNERNKCFHKKQRPDFQNTRRLIQNYLDEEEEKSKDYQKLLEDSPVTT

Query:  MENQ-LSHQHWIAPAPNRWKINADASWDERSGKGGVGWLIRDSFGSLIGAGCNCIEWKWPIKFLEAKAISEGLETYIQAKAEEDEAVRPELEVENDSLEV
         + +  + + W+ P P+ +K+N DA+  +     G+G +IRD+ G++I A      +   + + EA+A+  GL+  +       +A    L +E DS  V
Subjt:  MENQ-LSHQHWIAPAPNRWKINADASWDERSGKGGVGWLIRDSFGSLIGAGCNCIEWKWPIKFLEAKAISEGLETYIQAKAEEDEAVRPELEVENDSLEV

Query:  IQAINNTYLDLSELSLLVEEIEEMAPLARVVS
           INN     +E+  L++  +    ++ ++S
Subjt:  IQAINNTYLDLSELSLLVEEIEEMAPLARVVS

TrEMBL top hitse value%identityAlignment
A0A6J1CP26 uncharacterized protein LOC1110134122.0e-1831.88Show/hide
Query:  KAVIIMWNLWNERNKCFHKKQRPDFQNTRRLIQNYLDEEEEKSKDYQKLLEDSP---VTTMENQLSHQHWIAPAPNRWKINADASWDERSGKGGVGWLIR
        +++II W +W  RNK   K   P+ ++ +  I  Y+     ++ + +    +     +  +E+    Q W  P  N WK+N +A+W   +  GG+GW++R
Subjt:  KAVIIMWNLWNERNKCFHKKQRPDFQNTRRLIQNYLDEEEEKSKDYQKLLEDSP---VTTMENQLSHQHWIAPAPNRWKINADASWDERSGKGGVGWLIR

Query:  DSFGSLIGAGCNCIEWKWPIKFLEAKAISEGLETYIQAKAEEDEAVRPELEVENDSLEVIQAINNTYLDLSELSLLVEEIEEMAPLARVVSFAKCSRLSN
        D  G +I A C  I  +  I +LE  AI EGL      +A   E  RP + +E+DSLE I  ++    D +E+  L+EEI +M     +VS    SR +N
Subjt:  DSFGSLIGAGCNCIEWKWPIKFLEAKAISEGLETYIQAKAEEDEAVRPELEVENDSLEVIQAINNTYLDLSELSLLVEEIEEMAPLARVVSFAKCSRLSN

Query:  EFAHKLA
        + AH LA
Subjt:  EFAHKLA

A0A6J1DSV1 uncharacterized protein LOC1110236081.5e-1831.25Show/hide
Query:  KAVIIMWNLWNERNKCFHKKQRPDFQNTRRLIQNYLDEEEEKSKDY--QKLLEDSPVTTMENQLSHQHWIAPAPNRWKINADASWDERSGKGGVGWLIRD
        +++II W +W  RNK   K    + ++ + +I  Y+     +  +   +   +D  +       +   W  P  N WK+N DA+W   +  GG+GW++RD
Subjt:  KAVIIMWNLWNERNKCFHKKQRPDFQNTRRLIQNYLDEEEEKSKDY--QKLLEDSPVTTMENQLSHQHWIAPAPNRWKINADASWDERSGKGGVGWLIRD

Query:  SFGSLIGAGCNCIEWKWPIKFLEAKAISEGLETYIQ--AKAEEDEAVRPELEVENDSLEVIQAINNTYLDLSELSLLVEEIEEMAPLARVVSFAKCSRLS
          G +I A C  I  +  I +LE  AI EGL    Q   +  + E  RP + +E+DSLE I  ++    D +E+  L+EEI +M    ++VS    SR +
Subjt:  SFGSLIGAGCNCIEWKWPIKFLEAKAISEGLETYIQ--AKAEEDEAVRPELEVENDSLEVIQAINNTYLDLSELSLLVEEIEEMAPLARVVSFAKCSRLS

Query:  NEFAHKLA
        N+ AH LA
Subjt:  NEFAHKLA

B9FYJ3 Uncharacterized protein1.0e-1923.73Show/hide
Query:  VKELIGEDGRWKEMLIKEVFSPLEAEEILNMPRCKSNNKDEIIWNEENKGKFTVKSVGFYALKL-----------------------------VDSESWV
        V +LI + G W    I   F P++AE ILN+       +D I W+ +  G+F+V+S    A+ L                             V   +W 
Subjt:  VKELIGEDGRWKEMLIKEVFSPLEAEEILNMPRCKSNNKDEIIWNEENKGKFTVKSVGFYALKL-----------------------------VDSESWV

Query:  RVANTPTQYAFLFGDKTEWEAGDMTTQEGIHSFPLLGEVDECPLGPPASSSFWRGKDIWEGMRKHLD-------GKGTMKAVI----------------I
         + N+ T        K + E  D+ T  G+ S  ++  +  CP            + +WE M   +          G  K ++                +
Subjt:  RVANTPTQYAFLFGDKTEWEAGDMTTQEGIHSFPLLGEVDECPLGPPASSSFWRGKDIWEGMRKHLD-------GKGTMKAVI----------------I

Query:  MWNLWNERNKCFHKKQRPDFQNTRRLIQNYL----------DEEEEKSKD-YQKLLEDSPVTTMENQLSHQHWIAPAPNRWKINADASWDERSGKGGVGW
        +W +W+ RN+  H K  P    ++R I++Y+              EK K     +L+ S       + +   W  P P   K+N D S+ E  GKGG+G 
Subjt:  MWNLWNERNKCFHKKQRPDFQNTRRLIQNYL----------DEEEEKSKD-YQKLLEDSPVTTMENQLSHQHWIAPAPNRWKINADASWDERSGKGGVGW

Query:  LIRDSFGSLIGAGCNCIEWKWPIKFLEAKAISEGLETYIQAKAEEDEAVRPELEVENDSLEVIQAINNTYLDLSELSLLVEEIEEMAPLARVVSFAKCSR
        ++R+  G +I A C  ++       +E  A  +GL   +Q        + P + +E D L ++    +     SEL+ L+ EI+ +    R +SF KC R
Subjt:  LIRDSFGSLIGAGCNCIEWKWPIKFLEAKAISEGLETYIQAKAEEDEAVRPELEVENDSLEVIQAINNTYLDLSELSLLVEEIEEMAPLARVVSFAKCSR

Query:  LSNEFAHKLAHAG
          N  +H LA+ G
Subjt:  LSNEFAHKLAHAG

Q33AJ4 Retrotransposon protein, putative, unclassified8.8e-1924.38Show/hide
Query:  VKELIGEDGRWKEMLIKEVFSPLEAEEILNMPRCKSNNKDEIIWNEENKGKFTVKSVGFYALKLVDSESWVRVANTPTQYAFLFGDKTEWEAGDMTTQEG
        V +LI + G W    I + F P++AE ILN+        D I W+ +  G+F+V+S    A+ L   +     +          G+   W A        
Subjt:  VKELIGEDGRWKEMLIKEVFSPLEAEEILNMPRCKSNNKDEIIWNEENKGKFTVKSVGFYALKLVDSESWVRVANTPTQYAFLFGDKTEWEAGDMTTQEG

Query:  IHSFPLLGEVDECPLGPPASSSFWRGKDIWEGMRKHLDGKGTMKAVIIMWNLWNERNKCFHKKQRPDFQNTRRLIQNYLDEEEEKSKDYQKLLEDSP--V
              L + +      P S+       +   + +    +  +  ++++W +W+ RN+  H K  P    ++R I++Y+    E  +  Q   E     V
Subjt:  IHSFPLLGEVDECPLGPPASSSFWRGKDIWEGMRKHLDGKGTMKAVIIMWNLWNERNKCFHKKQRPDFQNTRRLIQNYLDEEEEKSKDYQKLLEDSP--V

Query:  TTMENQLSH---------QHWIAPAPNRWKINADASWDERSGKGGVGWLIRDSFGSLIGAGCNCIEWKWPIKFLEAKAISEGLETYIQAKAEEDEAVRPE
          ++ +L             W+ P P   K+N D S+ E  GKGG+G ++R+  G +I A C  ++        E  A  +GL   +Q        + P 
Subjt:  TTMENQLSH---------QHWIAPAPNRWKINADASWDERSGKGGVGWLIRDSFGSLIGAGCNCIEWKWPIKFLEAKAISEGLETYIQAKAEEDEAVRPE

Query:  LEVENDSLEVIQAINNTYLDLSELSLLVEEIEEMAPLARVVSFAKCSRLSNEFAHKLAHAG
        + +E D L +I    +     SEL+ L+ EI+ +    R +SF+KC R  N  +H LA+ G
Subjt:  LEVENDSLEVIQAINNTYLDLSELSLLVEEIEEMAPLARVVSFAKCSRLSNEFAHKLAHAG

Q8S5K1 Putative retroelement8.8e-1924.38Show/hide
Query:  VKELIGEDGRWKEMLIKEVFSPLEAEEILNMPRCKSNNKDEIIWNEENKGKFTVKSVGFYALKLVDSESWVRVANTPTQYAFLFGDKTEWEAGDMTTQEG
        V +LI + G W    I + F P++AE ILN+        D I W+ +  G+F+V+S    A+ L   +     +          G+   W A        
Subjt:  VKELIGEDGRWKEMLIKEVFSPLEAEEILNMPRCKSNNKDEIIWNEENKGKFTVKSVGFYALKLVDSESWVRVANTPTQYAFLFGDKTEWEAGDMTTQEG

Query:  IHSFPLLGEVDECPLGPPASSSFWRGKDIWEGMRKHLDGKGTMKAVIIMWNLWNERNKCFHKKQRPDFQNTRRLIQNYLDEEEEKSKDYQKLLEDSP--V
              L + +      P S+       +   + +    +  +  ++++W +W+ RN+  H K  P    ++R I++Y+    E  +  Q   E     V
Subjt:  IHSFPLLGEVDECPLGPPASSSFWRGKDIWEGMRKHLDGKGTMKAVIIMWNLWNERNKCFHKKQRPDFQNTRRLIQNYLDEEEEKSKDYQKLLEDSP--V

Query:  TTMENQLSH---------QHWIAPAPNRWKINADASWDERSGKGGVGWLIRDSFGSLIGAGCNCIEWKWPIKFLEAKAISEGLETYIQAKAEEDEAVRPE
          ++ +L             W+ P P   K+N D S+ E  GKGG+G ++R+  G +I A C  ++        E  A  +GL   +Q        + P 
Subjt:  TTMENQLSH---------QHWIAPAPNRWKINADASWDERSGKGGVGWLIRDSFGSLIGAGCNCIEWKWPIKFLEAKAISEGLETYIQAKAEEDEAVRPE

Query:  LEVENDSLEVIQAINNTYLDLSELSLLVEEIEEMAPLARVVSFAKCSRLSNEFAHKLAHAG
        + +E D L +I    +     SEL+ L+ EI+ +    R +SF+KC R  N  +H LA+ G
Subjt:  LEVENDSLEVIQAINNTYLDLSELSLLVEEIEEMAPLARVVSFAKCSRLSNEFAHKLAHAG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.1e-0522.38Show/hide
Query:  IMWNLWNERNKCFHKKQRPDFQNTRRLIQNYLDEEEEKSKDYQKLLEDSPVTTMENQLSHQHWIAPAPNRW-KINADASWDERSGKGGVGWLIRDSFGSL
        ++W LW  RN+   K +  D     R       E+ E+    ++L   +    +E  LS Q W AP P +W K N DA+W   + + G+GW++R+  G +
Subjt:  IMWNLWNERNKCFHKKQRPDFQNTRRLIQNYLDEEEEKSKDYQKLLEDSPVTTMENQLSHQHWIAPAPNRW-KINADASWDERSGKGGVGWLIRDSFGSL

Query:  IGAGCNCIEWKWPIKFLEAKAISEGLETYIQAKAEEDEAVRPELEVENDSLEVIQAINNTYLDLSELSLLVEEIEEMAPLARVVSFAKCSRLSNEFAHKL
        +  G   +     +   E +A+   + T  +   +        +  E+D+  ++  +N+       L   +E+I+++      V F    R  N+ A ++
Subjt:  IGAGCNCIEWKWPIKFLEAKAISEGLETYIQAKAEEDEAVRPELEVENDSLEVIQAINNTYLDLSELSLLVEEIEEMAPLARVVSFAKCSRLSNEFAHKL

Query:  AHAGVVFGKF
        A   + F  +
Subjt:  AHAGVVFGKF

AT3G09510.1 Ribonuclease H-like superfamily protein6.1e-0423.58Show/hide
Query:  VIIMWNLWNERNKCFHKKQRPDFQNTRRLIQNYLDEEEEKSKDYQKLLEDSPVTTMENQLSHQHWIAPAPNRWKINADASWDERSGKGGVGWLIRDSFGS
        V ++W +W  RN     K R     T    +    +    ++ ++K    +P  T +   +   W  P     K N DA +D +  +   GW+IR+ +G+
Subjt:  VIIMWNLWNERNKCFHKKQRPDFQNTRRLIQNYLDEEEEKSKDYQKLLEDSPVTTMENQLSHQHWIAPAPNRWKINADASWDERSGKGGVGWLIRDSFGS

Query:  LIGAGCNCIEWKWPIKFLEAKAISEGL-ETYIQAKAEEDEAVRPELEVENDSLEVIQAINNTYLDLSELSLLVEEIEEMAPLARVVSFAKCSRLSNEFAH
         I  G   +         E KA+   L +T+I+           ++ +E D   +I  IN      S L+  +E+I   A     + F    R  N+ AH
Subjt:  LIGAGCNCIEWKWPIKFLEAKAISEGL-ETYIQAKAEEDEAVRPELEVENDSLEVIQAINNTYLDLSELSLLVEEIEEMAPLARVVSFAKCSRLSNEFAH

Query:  KLAHAGVVFGKF
         LA  G  +  F
Subjt:  KLAHAGVVFGKF

AT4G29090.1 Ribonuclease H-like superfamily protein1.4e-0522.12Show/hide
Query:  IMWNLWNERNKCFHKKQRPDFQNTRRLIQNYLDEEEEKSKDYQKLLEDSPVTTMENQLSHQHWIAPAPNRW-KINADASWDERSGKGGVGWLIRDSFGSL
        ++W LW  RN+   + +  + Q   R  ++ L+E   +++      E        N+ S   W  P P++W K N DA+W+  + + G+GW++R+  G  
Subjt:  IMWNLWNERNKCFHKKQRPDFQNTRRLIQNYLDEEEEKSKDYQKLLEDSPVTTMENQLSHQHWIAPAPNRW-KINADASWDERSGKGGVGWLIRDSFGSL

Query:  IGAGCNCIEWKWPIKFLEAKAISEG-LETYIQAKAEEDEAVRPELEVENDSLEVIQAINNTYLDLSELSLLVEEIEEMAPLARVVSFAKCSRLSNEFAHK
               ++W       + K++ E  LE    A           +  E+DS  +I+ +NN  +    L   +++++ +      V F    R  N  A +
Subjt:  IGAGCNCIEWKWPIKFLEAKAISEG-LETYIQAKAEEDEAVRPELEVENDSLEVIQAINNTYLDLSELSLLVEEIEEMAPLARVVSFAKCSRLSNEFAHK

Query:  LAHAGVVF
        +A   + F
Subjt:  LAHAGVVF

AT5G65005.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.6e-0422.38Show/hide
Query:  IMWNLWNERNKCFHKKQRPDFQNTRRLIQNYLDEEEEKSKDYQKLLEDSPVTTMEN------QLSHQHWIAPAPNRWKINADASWDERSGKGGVGWLIRD
        +MW +W   N       R  FQ T  +  N          D ++ L+++     +N         +  W  P  ++ K N DAS  ER+   G+GW++R+
Subjt:  IMWNLWNERNKCFHKKQRPDFQNTRRLIQNYLDEEEEKSKDYQKLLEDSPVTTMEN------QLSHQHWIAPAPNRWKINADASWDERSGKGGVGWLIRD

Query:  SFGSLIGAGCNCIEWKWPIKFLEAKAISEGLETYIQAKAEEDEAVRPELEVENDSLEVIQAINNTYLDLSELSLLVEEIEEMAPLARVVSFAKCSRLSNE
        S G++I  G    + +   +  E         T I A          ++  E D+  + + I NT      L   ++ I+   P    + F+   R  N 
Subjt:  SFGSLIGAGCNCIEWKWPIKFLEAKAISEGLETYIQAKAEEDEAVRPELEVENDSLEVIQAINNTYLDLSELSLLVEEIEEMAPLARVVSFAKCSRLSNE

Query:  FAHKLAHAGV
         A  LA   +
Subjt:  FAHKLAHAGV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GATGATTTCAAGAGCAAGAGAGTTAAAGAGCTGATCGGTGAAGACGGAAGATGGAAAGAAATGCTGATCAAAGAAGTTTTTTCCCCTTTGGAAGCTGAAGAAATTCTAAA
TATGCCCAGATGCAAGTCCAACAATAAGGACGAGATTATTTGGAATGAGGAAAACAAAGGCAAATTCACTGTTAAGAGTGTTGGGTTTTATGCCCTAAAACTCGTAGATA
GTGAATCATGGGTGAGAGTGGCCAATACGCCGACTCAATATGCCTTCCTTTTTGGGGACAAGACCGAGTGGGAGGCTGGGGACATGACAACACAAGAAGGAATTCACTCC
TTCCCACTTCTAGGAGAAGTAGATGAGTGTCCATTAGGTCCCCCTGCTAGCTCGAGCTTTTGGAGAGGAAAGGATATTTGGGAAGGGATGAGAAAGCATTTGGATGGGAA
GGGCACAATGAAAGCAGTGATCATTATGTGGAATCTATGGAACGAAAGAAACAAATGCTTCCATAAAAAACAGAGGCCAGATTTTCAGAACACCAGAAGATTAATTCAAA
ACTACCTTGATGAAGAAGAAGAGAAATCGAAAGATTACCAGAAGCTGCTCGAAGATTCGCCAGTCACTACGATGGAGAACCAACTGAGTCACCAACATTGGATTGCGCCG
GCGCCGAATAGATGGAAAATTAATGCGGACGCTTCCTGGGATGAAAGATCTGGGAAGGGAGGGGTGGGGTGGTTAATTCGTGACTCATTCGGGTCTCTGATCGGGGCGGG
GTGCAATTGTATTGAATGGAAATGGCCGATAAAATTTCTTGAAGCAAAAGCGATATCAGAGGGCTTGGAAACGTACATTCAGGCGAAGGCTGAGGAAGATGAAGCGGTCA
GACCGGAGCTGGAAGTCGAGAATGATTCCCTTGAAGTGATCCAAGCAATCAACAATACCTATTTAGACCTTTCCGAATTATCGCTTTTGGTCGAAGAAATCGAAGAGATG
GCTCCTCTCGCAAGAGTTGTCTCCTTTGCAAAATGCTCGAGATTGAGCAACGAATTTGCGCACAAGCTTGCGCACGCTGGTGTGGTTTTTGGGAAATTCTGTTATTTTTT
TGGGCACTCTTCAAATGTTGTTTTGAGGGATGTTCAGGGTGCCAGGGATGAGAGTATCCCTAAATGGTTTAAGGATTGTTTAGTTGGTGTACCTACTTGCTTTTATTAA
mRNA sequenceShow/hide mRNA sequence
GATGATTTCAAGAGCAAGAGAGTTAAAGAGCTGATCGGTGAAGACGGAAGATGGAAAGAAATGCTGATCAAAGAAGTTTTTTCCCCTTTGGAAGCTGAAGAAATTCTAAA
TATGCCCAGATGCAAGTCCAACAATAAGGACGAGATTATTTGGAATGAGGAAAACAAAGGCAAATTCACTGTTAAGAGTGTTGGGTTTTATGCCCTAAAACTCGTAGATA
GTGAATCATGGGTGAGAGTGGCCAATACGCCGACTCAATATGCCTTCCTTTTTGGGGACAAGACCGAGTGGGAGGCTGGGGACATGACAACACAAGAAGGAATTCACTCC
TTCCCACTTCTAGGAGAAGTAGATGAGTGTCCATTAGGTCCCCCTGCTAGCTCGAGCTTTTGGAGAGGAAAGGATATTTGGGAAGGGATGAGAAAGCATTTGGATGGGAA
GGGCACAATGAAAGCAGTGATCATTATGTGGAATCTATGGAACGAAAGAAACAAATGCTTCCATAAAAAACAGAGGCCAGATTTTCAGAACACCAGAAGATTAATTCAAA
ACTACCTTGATGAAGAAGAAGAGAAATCGAAAGATTACCAGAAGCTGCTCGAAGATTCGCCAGTCACTACGATGGAGAACCAACTGAGTCACCAACATTGGATTGCGCCG
GCGCCGAATAGATGGAAAATTAATGCGGACGCTTCCTGGGATGAAAGATCTGGGAAGGGAGGGGTGGGGTGGTTAATTCGTGACTCATTCGGGTCTCTGATCGGGGCGGG
GTGCAATTGTATTGAATGGAAATGGCCGATAAAATTTCTTGAAGCAAAAGCGATATCAGAGGGCTTGGAAACGTACATTCAGGCGAAGGCTGAGGAAGATGAAGCGGTCA
GACCGGAGCTGGAAGTCGAGAATGATTCCCTTGAAGTGATCCAAGCAATCAACAATACCTATTTAGACCTTTCCGAATTATCGCTTTTGGTCGAAGAAATCGAAGAGATG
GCTCCTCTCGCAAGAGTTGTCTCCTTTGCAAAATGCTCGAGATTGAGCAACGAATTTGCGCACAAGCTTGCGCACGCTGGTGTGGTTTTTGGGAAATTCTGTTATTTTTT
TGGGCACTCTTCAAATGTTGTTTTGAGGGATGTTCAGGGTGCCAGGGATGAGAGTATCCCTAAATGGTTTAAGGATTGTTTAGTTGGTGTACCTACTTGCTTTTATTAA
Protein sequenceShow/hide protein sequence
DDFKSKRVKELIGEDGRWKEMLIKEVFSPLEAEEILNMPRCKSNNKDEIIWNEENKGKFTVKSVGFYALKLVDSESWVRVANTPTQYAFLFGDKTEWEAGDMTTQEGIHS
FPLLGEVDECPLGPPASSSFWRGKDIWEGMRKHLDGKGTMKAVIIMWNLWNERNKCFHKKQRPDFQNTRRLIQNYLDEEEEKSKDYQKLLEDSPVTTMENQLSHQHWIAP
APNRWKINADASWDERSGKGGVGWLIRDSFGSLIGAGCNCIEWKWPIKFLEAKAISEGLETYIQAKAEEDEAVRPELEVENDSLEVIQAINNTYLDLSELSLLVEEIEEM
APLARVVSFAKCSRLSNEFAHKLAHAGVVFGKFCYFFGHSSNVVLRDVQGARDESIPKWFKDCLVGVPTCFY