; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg002238 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg002238
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionrRNA biogenesis protein RRP5
Genome locationscaffold1:31239353..31245251
RNA-Seq ExpressionSpg002238
SyntenySpg002238
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0006397 - mRNA processing (biological process)
GO:0009553 - embryo sac development (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0032040 - small-subunit processome (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR003029 - S1 domain
IPR012340 - Nucleic acid-binding, OB-fold
IPR022967 - RNA-binding domain, S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595619.1 rRNA biogenesis protein RRP5, partial [Cucurbita argyrosperma subsp. sororia]1.9e-12782.33Show/hide
Query:  KDELVKREKKVKEEI-----ISFFSTLYGLEL----ASAFEGPVFSYTDVKPGTLIRAKVIIVDDFGAIVQFPGGLKALCPLSHMSEFEIAKPRKKFKVG
        +D + K  KK KE       I  F  L GL +    ASAFEGPVFSY+DVKPGTLIRAKVI+VD+FGAIVQFPGGLKALCPLSHMSEFEIAKPRKKFKVG
Subjt:  KDELVKREKKVKEEI-----ISFFSTLYGLEL----ASAFEGPVFSYTDVKPGTLIRAKVIIVDDFGAIVQFPGGLKALCPLSHMSEFEIAKPRKKFKVG

Query:  AELIFRVLGCKSKRITVTHKKALVKSKLEVLSSYADATAGLVTHGWITKIERHGCFVRFYNGVQGFAPRQVCCSIHITFELVIFLFELGIEPGSDPSSTY
        AELIFRVLGCKSKRITVTHKKALVKSKLEVLSSYADATAGLVTHGWITKIE+HGCFV+FYNGVQGFAPR                FELGIEPGSDPSSTY
Subjt:  AELIFRVLGCKSKRITVTHKKALVKSKLEVLSSYADATAGLVTHGWITKIERHGCFVRFYNGVQGFAPRQVCCSIHITFELVIFLFELGIEPGSDPSSTY

Query:  HIGQVIKCRITSSSPSSKRISLSFVMKPARVSEDAKVELGCIVSGVVDEITQTHVTLYINRTGYSRGRISTEHLSDHQAHAALMKSVLKPGYQFEQLLVL
        HIGQVIKCRITSS+PSSKRISLSFVMKPARVSEDAKVELGCIVSGVVDEIT+THVTLYINR+ YSRGRIS EHLSDHQ HAALMKSVLKPGYQF+QLLVL
Subjt:  HIGQVIKCRITSSSPSSKRISLSFVMKPARVSEDAKVELGCIVSGVVDEITQTHVTLYINRTGYSRGRISTEHLSDHQAHAALMKSVLKPGYQFEQLLVL

TYK02426.1 rRNA biogenesis protein RRP5 [Cucumis melo var. makuwa]3.9e-12889.39Show/hide
Query:  ASAFEGPVFSYTDVKPGTLIRAKVIIVDDFGAIVQFPGGLKALCPLSHMSEFEIAKPRKKFKVGAELIFRVLGCKSKRITVTHKKALVKSKLEVLSSYAD
        ASAFEGPVFSY+DVKPGTLIRAKVI+VDDFGAIVQFPGGLKALCPLSHMSEFEIAKPRKKFKVGAELIFRVLGCKSKRITVTHKK LVKSKLEVLSSYAD
Subjt:  ASAFEGPVFSYTDVKPGTLIRAKVIIVDDFGAIVQFPGGLKALCPLSHMSEFEIAKPRKKFKVGAELIFRVLGCKSKRITVTHKKALVKSKLEVLSSYAD

Query:  ATAGLVTHGWITKIERHGCFVRFYNGVQGFAPRQVCCSIHITFELVIFLFELGIEPGSDPSSTYHIGQVIKCRITSSSPSSKRISLSFVMKPARVSEDAK
        ATAGLVTHGWITKIE+HGCFVRFYNGVQGFAPR                FELGIEPGSDPSSTYHIGQVIKCRITSS+PSSKRISLSFVMKPARVSED K
Subjt:  ATAGLVTHGWITKIERHGCFVRFYNGVQGFAPRQVCCSIHITFELVIFLFELGIEPGSDPSSTYHIGQVIKCRITSSSPSSKRISLSFVMKPARVSEDAK

Query:  VELGCIVSGVVDEITQTHVTLYINRTGYSRGRISTEHLSDHQAHAALMKSVLKPGYQFEQLLVL
        V+LGCIV+GVVDEIT+THVTLYINRTGYSRGRISTEHLSDHQAHA+LMK+VLKPGYQF+QLLVL
Subjt:  VELGCIVSGVVDEITQTHVTLYINRTGYSRGRISTEHLSDHQAHAALMKSVLKPGYQFEQLLVL

XP_008442208.1 PREDICTED: LOW QUALITY PROTEIN: rRNA biogenesis protein RRP5 [Cucumis melo]3.9e-12889.39Show/hide
Query:  ASAFEGPVFSYTDVKPGTLIRAKVIIVDDFGAIVQFPGGLKALCPLSHMSEFEIAKPRKKFKVGAELIFRVLGCKSKRITVTHKKALVKSKLEVLSSYAD
        ASAFEGPVFSY+DVKPGTLIRAKVI+VDDFGAIVQFPGGLKALCPLSHMSEFEIAKPRKKFKVGAELIFRVLGCKSKRITVTHKK LVKSKLEVLSSYAD
Subjt:  ASAFEGPVFSYTDVKPGTLIRAKVIIVDDFGAIVQFPGGLKALCPLSHMSEFEIAKPRKKFKVGAELIFRVLGCKSKRITVTHKKALVKSKLEVLSSYAD

Query:  ATAGLVTHGWITKIERHGCFVRFYNGVQGFAPRQVCCSIHITFELVIFLFELGIEPGSDPSSTYHIGQVIKCRITSSSPSSKRISLSFVMKPARVSEDAK
        ATAGLVTHGWITKIE+HGCFVRFYNGVQGFAPR                FELGIEPGSDPSSTYHIGQVIKCRITSS+PSSKRISLSFVMKPARVSED K
Subjt:  ATAGLVTHGWITKIERHGCFVRFYNGVQGFAPRQVCCSIHITFELVIFLFELGIEPGSDPSSTYHIGQVIKCRITSSSPSSKRISLSFVMKPARVSEDAK

Query:  VELGCIVSGVVDEITQTHVTLYINRTGYSRGRISTEHLSDHQAHAALMKSVLKPGYQFEQLLVL
        V+LGCIV+GVVDEIT+THVTLYINRTGYSRGRISTEHLSDHQAHA+LMK+VLKPGYQF+QLLVL
Subjt:  VELGCIVSGVVDEITQTHVTLYINRTGYSRGRISTEHLSDHQAHAALMKSVLKPGYQFEQLLVL

XP_022925023.1 rRNA biogenesis protein RRP5 [Cucurbita moschata]1.9e-12782.33Show/hide
Query:  KDELVKREKKVKEEI-----ISFFSTLYGLEL----ASAFEGPVFSYTDVKPGTLIRAKVIIVDDFGAIVQFPGGLKALCPLSHMSEFEIAKPRKKFKVG
        +D + K  KK KE       I  F  L GL +    ASAFEGPVFSY+DVKPGTLIRAKVI+VD+FGAIVQFPGGLKALCPLSHMSEFEIAKPRKKFKVG
Subjt:  KDELVKREKKVKEEI-----ISFFSTLYGLEL----ASAFEGPVFSYTDVKPGTLIRAKVIIVDDFGAIVQFPGGLKALCPLSHMSEFEIAKPRKKFKVG

Query:  AELIFRVLGCKSKRITVTHKKALVKSKLEVLSSYADATAGLVTHGWITKIERHGCFVRFYNGVQGFAPRQVCCSIHITFELVIFLFELGIEPGSDPSSTY
        AELIFRVLGCKSKRITVTHKKALVKSKLEVLSSYADATAGLVTHGWITKIE+HGCFV+FYNGVQGFAPR                FELGIEPGSDPSSTY
Subjt:  AELIFRVLGCKSKRITVTHKKALVKSKLEVLSSYADATAGLVTHGWITKIERHGCFVRFYNGVQGFAPRQVCCSIHITFELVIFLFELGIEPGSDPSSTY

Query:  HIGQVIKCRITSSSPSSKRISLSFVMKPARVSEDAKVELGCIVSGVVDEITQTHVTLYINRTGYSRGRISTEHLSDHQAHAALMKSVLKPGYQFEQLLVL
        HIGQVIKCRITSS+PSSKRISLSFVMKPARVSEDAKVELGCIVSGVVDEIT+THVTLYINR+ YSRGRIS EHLSDHQ HAALMKSVLKPGYQF+QLLVL
Subjt:  HIGQVIKCRITSSSPSSKRISLSFVMKPARVSEDAKVELGCIVSGVVDEITQTHVTLYINRTGYSRGRISTEHLSDHQAHAALMKSVLKPGYQFEQLLVL

XP_023517465.1 rRNA biogenesis protein RRP5 isoform X1 [Cucurbita pepo subsp. pepo]1.9e-12782.33Show/hide
Query:  KDELVKREKKVKEEI-----ISFFSTLYGLEL----ASAFEGPVFSYTDVKPGTLIRAKVIIVDDFGAIVQFPGGLKALCPLSHMSEFEIAKPRKKFKVG
        +D + K  KK KE       I  F  L GL +    ASAFEGPVFSY+DVKPGTLIRAKVI+VD+FGAIVQFPGGLKALCPLSHMSEFEIAKPRKKFKVG
Subjt:  KDELVKREKKVKEEI-----ISFFSTLYGLEL----ASAFEGPVFSYTDVKPGTLIRAKVIIVDDFGAIVQFPGGLKALCPLSHMSEFEIAKPRKKFKVG

Query:  AELIFRVLGCKSKRITVTHKKALVKSKLEVLSSYADATAGLVTHGWITKIERHGCFVRFYNGVQGFAPRQVCCSIHITFELVIFLFELGIEPGSDPSSTY
        AELIFRVLGCKSKRITVTHKKALVKSKLEVLSSYADATAGLVTHGWITKIE+HGCFV+FYNGVQGFAPR                FELGIEPGSDPSSTY
Subjt:  AELIFRVLGCKSKRITVTHKKALVKSKLEVLSSYADATAGLVTHGWITKIERHGCFVRFYNGVQGFAPRQVCCSIHITFELVIFLFELGIEPGSDPSSTY

Query:  HIGQVIKCRITSSSPSSKRISLSFVMKPARVSEDAKVELGCIVSGVVDEITQTHVTLYINRTGYSRGRISTEHLSDHQAHAALMKSVLKPGYQFEQLLVL
        HIGQVIKCRITSS+PSSKRISLSFVMKPARVSEDAKVELGCIVSGVVDEIT+THVTLYINR+ YSRGRIS EHLSDHQ HAALMKSVLKPGYQF+QLLVL
Subjt:  HIGQVIKCRITSSSPSSKRISLSFVMKPARVSEDAKVELGCIVSGVVDEITQTHVTLYINRTGYSRGRISTEHLSDHQAHAALMKSVLKPGYQFEQLLVL

TrEMBL top hitse value%identityAlignment
A0A0A0L3Z5 Uncharacterized protein3.9e-12682Show/hide
Query:  DELVKR-EKKVKEEI-----ISFFSTLYGLEL----ASAFEGPVFSYTDVKPGTLIRAKVIIVDDFGAIVQFPGGLKALCPLSHMSEFEIAKPRKKFKVG
        +E+VK+  KK KE       I  F  L GL +    ASAFEGPVFSY+DVKPGTLIRAKVI+VDDFGAIVQFPGGLKALCPLSHMSEFEIAKPRKKFKVG
Subjt:  DELVKR-EKKVKEEI-----ISFFSTLYGLEL----ASAFEGPVFSYTDVKPGTLIRAKVIIVDDFGAIVQFPGGLKALCPLSHMSEFEIAKPRKKFKVG

Query:  AELIFRVLGCKSKRITVTHKKALVKSKLEVLSSYADATAGLVTHGWITKIERHGCFVRFYNGVQGFAPRQVCCSIHITFELVIFLFELGIEPGSDPSSTY
        AELIFRVLGCKSKRITVTHKK LVKSKLEVLSSYADATAGLVTHGWITKIE+HGCFVRFYNGVQGFAPR                FELGIEPGSDPSSTY
Subjt:  AELIFRVLGCKSKRITVTHKKALVKSKLEVLSSYADATAGLVTHGWITKIERHGCFVRFYNGVQGFAPRQVCCSIHITFELVIFLFELGIEPGSDPSSTY

Query:  HIGQVIKCRITSSSPSSKRISLSFVMKPARVSEDAKVELGCIVSGVVDEITQTHVTLYINRTGYSRGRISTEHLSDHQAHAALMKSVLKPGYQFEQLLVL
        HIGQVIKCRITSS+ SSKRISLSFVMKPARVSED KVELGCIV+GVVDEIT+THVTLYINRT YSRGRISTEHLSDHQAHA+ +KSVLKPGYQF+QLLVL
Subjt:  HIGQVIKCRITSSSPSSKRISLSFVMKPARVSEDAKVELGCIVSGVVDEITQTHVTLYINRTGYSRGRISTEHLSDHQAHAALMKSVLKPGYQFEQLLVL

A0A1S3B5U4 LOW QUALITY PROTEIN: rRNA biogenesis protein RRP51.9e-12889.39Show/hide
Query:  ASAFEGPVFSYTDVKPGTLIRAKVIIVDDFGAIVQFPGGLKALCPLSHMSEFEIAKPRKKFKVGAELIFRVLGCKSKRITVTHKKALVKSKLEVLSSYAD
        ASAFEGPVFSY+DVKPGTLIRAKVI+VDDFGAIVQFPGGLKALCPLSHMSEFEIAKPRKKFKVGAELIFRVLGCKSKRITVTHKK LVKSKLEVLSSYAD
Subjt:  ASAFEGPVFSYTDVKPGTLIRAKVIIVDDFGAIVQFPGGLKALCPLSHMSEFEIAKPRKKFKVGAELIFRVLGCKSKRITVTHKKALVKSKLEVLSSYAD

Query:  ATAGLVTHGWITKIERHGCFVRFYNGVQGFAPRQVCCSIHITFELVIFLFELGIEPGSDPSSTYHIGQVIKCRITSSSPSSKRISLSFVMKPARVSEDAK
        ATAGLVTHGWITKIE+HGCFVRFYNGVQGFAPR                FELGIEPGSDPSSTYHIGQVIKCRITSS+PSSKRISLSFVMKPARVSED K
Subjt:  ATAGLVTHGWITKIERHGCFVRFYNGVQGFAPRQVCCSIHITFELVIFLFELGIEPGSDPSSTYHIGQVIKCRITSSSPSSKRISLSFVMKPARVSEDAK

Query:  VELGCIVSGVVDEITQTHVTLYINRTGYSRGRISTEHLSDHQAHAALMKSVLKPGYQFEQLLVL
        V+LGCIV+GVVDEIT+THVTLYINRTGYSRGRISTEHLSDHQAHA+LMK+VLKPGYQF+QLLVL
Subjt:  VELGCIVSGVVDEITQTHVTLYINRTGYSRGRISTEHLSDHQAHAALMKSVLKPGYQFEQLLVL

A0A5D3BW30 rRNA biogenesis protein RRP51.9e-12889.39Show/hide
Query:  ASAFEGPVFSYTDVKPGTLIRAKVIIVDDFGAIVQFPGGLKALCPLSHMSEFEIAKPRKKFKVGAELIFRVLGCKSKRITVTHKKALVKSKLEVLSSYAD
        ASAFEGPVFSY+DVKPGTLIRAKVI+VDDFGAIVQFPGGLKALCPLSHMSEFEIAKPRKKFKVGAELIFRVLGCKSKRITVTHKK LVKSKLEVLSSYAD
Subjt:  ASAFEGPVFSYTDVKPGTLIRAKVIIVDDFGAIVQFPGGLKALCPLSHMSEFEIAKPRKKFKVGAELIFRVLGCKSKRITVTHKKALVKSKLEVLSSYAD

Query:  ATAGLVTHGWITKIERHGCFVRFYNGVQGFAPRQVCCSIHITFELVIFLFELGIEPGSDPSSTYHIGQVIKCRITSSSPSSKRISLSFVMKPARVSEDAK
        ATAGLVTHGWITKIE+HGCFVRFYNGVQGFAPR                FELGIEPGSDPSSTYHIGQVIKCRITSS+PSSKRISLSFVMKPARVSED K
Subjt:  ATAGLVTHGWITKIERHGCFVRFYNGVQGFAPRQVCCSIHITFELVIFLFELGIEPGSDPSSTYHIGQVIKCRITSSSPSSKRISLSFVMKPARVSEDAK

Query:  VELGCIVSGVVDEITQTHVTLYINRTGYSRGRISTEHLSDHQAHAALMKSVLKPGYQFEQLLVL
        V+LGCIV+GVVDEIT+THVTLYINRTGYSRGRISTEHLSDHQAHA+LMK+VLKPGYQF+QLLVL
Subjt:  VELGCIVSGVVDEITQTHVTLYINRTGYSRGRISTEHLSDHQAHAALMKSVLKPGYQFEQLLVL

A0A6J1EE30 rRNA biogenesis protein RRP59.3e-12882.33Show/hide
Query:  KDELVKREKKVKEEI-----ISFFSTLYGLEL----ASAFEGPVFSYTDVKPGTLIRAKVIIVDDFGAIVQFPGGLKALCPLSHMSEFEIAKPRKKFKVG
        +D + K  KK KE       I  F  L GL +    ASAFEGPVFSY+DVKPGTLIRAKVI+VD+FGAIVQFPGGLKALCPLSHMSEFEIAKPRKKFKVG
Subjt:  KDELVKREKKVKEEI-----ISFFSTLYGLEL----ASAFEGPVFSYTDVKPGTLIRAKVIIVDDFGAIVQFPGGLKALCPLSHMSEFEIAKPRKKFKVG

Query:  AELIFRVLGCKSKRITVTHKKALVKSKLEVLSSYADATAGLVTHGWITKIERHGCFVRFYNGVQGFAPRQVCCSIHITFELVIFLFELGIEPGSDPSSTY
        AELIFRVLGCKSKRITVTHKKALVKSKLEVLSSYADATAGLVTHGWITKIE+HGCFV+FYNGVQGFAPR                FELGIEPGSDPSSTY
Subjt:  AELIFRVLGCKSKRITVTHKKALVKSKLEVLSSYADATAGLVTHGWITKIERHGCFVRFYNGVQGFAPRQVCCSIHITFELVIFLFELGIEPGSDPSSTY

Query:  HIGQVIKCRITSSSPSSKRISLSFVMKPARVSEDAKVELGCIVSGVVDEITQTHVTLYINRTGYSRGRISTEHLSDHQAHAALMKSVLKPGYQFEQLLVL
        HIGQVIKCRITSS+PSSKRISLSFVMKPARVSEDAKVELGCIVSGVVDEIT+THVTLYINR+ YSRGRIS EHLSDHQ HAALMKSVLKPGYQF+QLLVL
Subjt:  HIGQVIKCRITSSSPSSKRISLSFVMKPARVSEDAKVELGCIVSGVVDEITQTHVTLYINRTGYSRGRISTEHLSDHQAHAALMKSVLKPGYQFEQLLVL

A0A6J1HM63 rRNA biogenesis protein RRP57.9e-12782Show/hide
Query:  KDELVKREKKVKEEI-----ISFFSTLYGLEL----ASAFEGPVFSYTDVKPGTLIRAKVIIVDDFGAIVQFPGGLKALCPLSHMSEFEIAKPRKKFKVG
        +D + K  KK KE       I  F  L GL +    ASAF GPVFSY+DVKPGTLIRAKVI+VD+FGAIVQFPGGLKALCPLSHMSEFEIAKPRKKFKVG
Subjt:  KDELVKREKKVKEEI-----ISFFSTLYGLEL----ASAFEGPVFSYTDVKPGTLIRAKVIIVDDFGAIVQFPGGLKALCPLSHMSEFEIAKPRKKFKVG

Query:  AELIFRVLGCKSKRITVTHKKALVKSKLEVLSSYADATAGLVTHGWITKIERHGCFVRFYNGVQGFAPRQVCCSIHITFELVIFLFELGIEPGSDPSSTY
        AELIFRVLGCKSKRITVTHKKALVKSKLEVLSSYADATAGLVTHGWITKIE+HGCFV+FYNGVQGFAPR                FELGIEPGSDPSSTY
Subjt:  AELIFRVLGCKSKRITVTHKKALVKSKLEVLSSYADATAGLVTHGWITKIERHGCFVRFYNGVQGFAPRQVCCSIHITFELVIFLFELGIEPGSDPSSTY

Query:  HIGQVIKCRITSSSPSSKRISLSFVMKPARVSEDAKVELGCIVSGVVDEITQTHVTLYINRTGYSRGRISTEHLSDHQAHAALMKSVLKPGYQFEQLLVL
        HIGQVIKCRITSS+PSSKRISLSFVMKPARVSEDAKVELGCIVSGVVDEIT+THVTLYINR+ YSRGRIS EHLSDHQ HAALMKSVLKPGYQF+QLLVL
Subjt:  HIGQVIKCRITSSSPSSKRISLSFVMKPARVSEDAKVELGCIVSGVVDEITQTHVTLYINRTGYSRGRISTEHLSDHQAHAALMKSVLKPGYQFEQLLVL

SwissProt top hitse value%identityAlignment
A7MB10 Protein RRP5 homolog7.8e-3133.23Show/hide
Query:  KRKD-RLAIGRRIQQRSKKTTENDKDELVKREKKVKEEIISF--FSTLYGLEL-ASAFEGPVFSYTDVKPGTLIRAKVIIVDDFGAIVQFPGGLKALCPL
        K KD  LA  RR    + K T   K E  K     K  II +     L  L L  S  E     Y D+KPG L++ KV+ +   G +V+    ++ L P 
Subjt:  KRKD-RLAIGRRIQQRSKKTTENDKDELVKREKKVKEEIISF--FSTLYGLEL-ASAFEGPVFSYTDVKPGTLIRAKVIIVDDFGAIVQFPGGLKALCPL

Query:  SHMSEFEIAKPRKKFKVGAELIFRVLGC--KSKRITVTHKKALVKSKLEVLSSYADATAGLVTHGWITKIERHGCFVRFYNGVQGFAPRQVCCSIHITFE
         H+++  I  P KK+ VG E+  RVL C  K+K++ +T KK LV+SKL  ++ Y DA  GL THG+I +++ +GC V+FYN VQG  PR           
Subjt:  SHMSEFEIAKPRKKFKVGAELIFRVLGC--KSKRITVTHKKALVKSKLEVLSSYADATAGLVTHGWITKIERHGCFVRFYNGVQGFAPRQVCCSIHITFE

Query:  LVIFLFELGIEPGSDPSSTYHIGQVIKCRITSSSPSSKRISLSF--VMKPARVSEDAK------VELGCIVSGVVDEITQTHVTLYINRTGYSRGRISTE
              EL  E   DP S ++ GQV+K  + +  PS +R+ LSF  +  P +  E         V  G +    V E T+  + + +       G + T 
Subjt:  LVIFLFELGIEPGSDPSSTYHIGQVIKCRITSSSPSSKRISLSF--VMKPARVSEDAK------VELGCIVSGVVDEITQTHVTLYINRTGYSRGRISTE

Query:  HLSDHQAHAALMKSVLKPGYQFEQLLVL
        HLSDH  +  L+   L+ G    ++L L
Subjt:  HLSDHQAHAALMKSVLKPGYQFEQLLVL

F4J8K6 rRNA biogenesis protein RRP53.4e-9557.64Show/hide
Query:  DELVKREKKVKE-----EIISFFSTLYGLELA----SAFEGPVFSYTDVKPGTLIRAKVIIVDDFGAIVQFPGGLKALCPLSHMSEFEIAKPRKKFKVGA
        DE+ K EKK KE       +     + GL +     SAFEGPVF+++DVKPG + +AKVI VD FGAIVQF GGLKA+CPL HMSEFE+ KPRKKFKVGA
Subjt:  DELVKREKKVKE-----EIISFFSTLYGLELA----SAFEGPVFSYTDVKPGTLIRAKVIIVDDFGAIVQFPGGLKALCPLSHMSEFEIAKPRKKFKVGA

Query:  ELIFRVLGCKSKRITVTHKKALVKSKLEVLSSYADATAGLVTHGWITKIERHGCFVRFYNGVQGFAPRQVCCSIHITFELVIFLFELGIEPGSDPSSTYH
        EL+FRVLGCKSKRITVT+KK LVKSKL +LSSY DAT GLVTHGWITKIE+HGCFVRFYNGVQGF PR                FELG+EPGSDP S +H
Subjt:  ELIFRVLGCKSKRITVTHKKALVKSKLEVLSSYADATAGLVTHGWITKIERHGCFVRFYNGVQGFAPRQVCCSIHITFELVIFLFELGIEPGSDPSSTYH

Query:  IGQVIKCRITSSSPSSKRISLSFVMKPARVSEDAKVELGCIVSGVVDEITQTHVTLYINRTGYSRGRISTEHLSDHQAHAALMKSVLKPGYQFEQLLVL-
        +G+V+KCR+TS+   ++RI+LSF++KP+ VSED  ++LG IVSG++D IT   V + +      +G IS EHL+DH   A L+ S+L+PGY+ ++LLVL 
Subjt:  IGQVIKCRITSSSPSSKRISLSFVMKPARVSEDAKVELGCIVSGVVDEITQTHVTLYINRTGYSRGRISTEHLSDHQAHAALMKSVLKPGYQFEQLLVL-

Query:  ---GNFIFSNSFQL
            N   S+ + L
Subjt:  ---GNFIFSNSFQL

Q05022 rRNA biogenesis protein RRP51.0e-0625Show/hide
Query:  FPGGLKALCPLSHMSEFEIAKPRKKFKVGAELIFRVLGCKSK-RITVTHKKALVK---SKLEVLSSYADA----TAGLVTHGWITKIERHGCFVRFYNGV
        F G  KA  P  H+S+  +  P +KFK+G+++  RV+   S+  + VT KK+LV    ++L ++S+Y +A         T   I   + +GC + F+ G+
Subjt:  FPGGLKALCPLSHMSEFEIAKPRKKFKVGAELIFRVLGCKSK-RITVTHKKALVK---SKLEVLSSYADA----TAGLVTHGWITKIERHGCFVRFYNGV

Query:  QGFAPRQVCCSIHITFELVIFLFELGIEPGSDPSSTYHIGQVIKCRITSSSPSSKRISLSFVMKPARVSEDAK-----VELGCIVSGVVDEITQTHVTLY
         GF P      + +                  P     +GQ +  ++       +RI  +  +   + ++        V    I++  V E T+  V + 
Subjt:  QGFAPRQVCCSIHITFELVIFLFELGIEPGSDPSSTYHIGQVIKCRITSSSPSSKRISLSFVMKPARVSEDAK-----VELGCIVSGVVDEITQTHVTLY

Query:  INRTGYSRGRISTEHLSD---HQAHAALMKSVLKPGYQFEQLLV
        I   G  RG I   HLSD    Q  A L K  L+ G +   L++
Subjt:  INRTGYSRGRISTEHLSD---HQAHAALMKSVLKPGYQFEQLLV

Q14690 Protein RRP5 homolog1.6e-3131.27Show/hide
Query:  SAFEGPVFSYTDVKPGTLIRAKVIIVDDFGAIVQFPGGLKALCPLSHMSEFEIAKPRKKFKVGAELIFRVLGC--KSKRITVTHKKALVKSKLEVLSSYA
        S  E     Y D++PG +++  V+ +  +G +V+    ++ L P  H+++  +  P KK+ +G E+  RVL C  ++K++ +T KK L++SKL V++ YA
Subjt:  SAFEGPVFSYTDVKPGTLIRAKVIIVDDFGAIVQFPGGLKALCPLSHMSEFEIAKPRKKFKVGAELIFRVLGC--KSKRITVTHKKALVKSKLEVLSSYA

Query:  DATAGLVTHGWITKIERHGCFVRFYNGVQGFAPRQVCCSIHITFELVIFLFELGIEPGSDPSSTYHIGQVIKCRITSSSPSSKRISLSFVM--------K
        DA  GL THG+I +++ +GC V+FYN VQG  P+                 EL  E   DP   ++ GQV+K  + +  PS +R+ LSF +        +
Subjt:  DATAGLVTHGWITKIERHGCFVRFYNGVQGFAPRQVCCSIHITFELVIFLFELGIEPGSDPSSTYHIGQVIKCRITSSSPSSKRISLSFVM--------K

Query:  PARVSE--DAKVELGCIVSGVVDEITQTHVTLYINRTGYSRGRISTEHLSDHQAHAALMKSVLKPGYQFEQLLVL
        PA  S+     + +G +V   V E T+  + + +      R  + T HLSDH A+  L+   L+ G    ++L L
Subjt:  PARVSE--DAKVELGCIVSGVVDEITQTHVTLYINRTGYSRGRISTEHLSDHQAHAALMKSVLKPGYQFEQLLVL

Q6NS46 Protein RRP5 homolog6.0e-3132.01Show/hide
Query:  SAFEGPVFSYTDVKPGTLIRAKVIIVDDFGAIVQFPGGLKALCPLSHMSEFEIAKPRKKFKVGAELIFRVLGC--KSKRITVTHKKALVKSKLEVLSSYA
        S    P   Y D+K GT+++  V+ +  FG +V+    +K L P  H+++  +  P KK+  G E+  RVL C  ++K++ +T KK LV SKL +++ Y 
Subjt:  SAFEGPVFSYTDVKPGTLIRAKVIIVDDFGAIVQFPGGLKALCPLSHMSEFEIAKPRKKFKVGAELIFRVLGC--KSKRITVTHKKALVKSKLEVLSSYA

Query:  DATAGLVTHGWITKIERHGCFVRFYNGVQGFAPRQVCCSIHITFELVIFLFELGIEPGSDPSSTYHIGQVIKCRITSSSPSSKRISLSFVMKPARVSEDA
         A  GL THG I +++ +GC V+FYN VQG  P+    + HI                 DP + ++ GQV+K  + S  PS +R+ LSF +      +D 
Subjt:  DATAGLVTHGWITKIERHGCFVRFYNGVQGFAPRQVCCSIHITFELVIFLFELGIEPGSDPSSTYHIGQVIKCRITSSSPSSKRISLSFVMKPARVSEDA

Query:  KVE----------LGCIVSGVVDEITQTHVTLYI---NRTGYSRGRISTEHLSDHQAHAALMKSVLKPGYQFEQLLVL
         VE          +G +V   V E T+T + + I   N   +    + T HLSDH A+  L+   L+ G    ++L L
Subjt:  KVE----------LGCIVSGVVDEITQTHVTLYI---NRTGYSRGRISTEHLSDHQAHAALMKSVLKPGYQFEQLLVL

Arabidopsis top hitse value%identityAlignment
AT3G11964.1 RNA binding;RNA binding1.9e-8858.63Show/hide
Query:  SAFEGPVFSYTDVKPGTLIRAKVIIVDDFGAIVQFPGGLKALCPLSHMSEFEIAKPRKKFKVGAELIFRVLGCKSKRITVTHKKALVKSKLEVLSSYADA
        SAFEGPVF+++DVKPG + +AKVI VD FGAIVQF GGLKA+CPL HMSEFE+ KPRKKFKVGAEL+FRVLGCKSKRITVT+KK LVKSKL +LSSY DA
Subjt:  SAFEGPVFSYTDVKPGTLIRAKVIIVDDFGAIVQFPGGLKALCPLSHMSEFEIAKPRKKFKVGAELIFRVLGCKSKRITVTHKKALVKSKLEVLSSYADA

Query:  TAGLVTHGWITKIERHGCFVRFYNGVQGFAPRQVCCSIHITFELVIFLFELGIEPGSDPSSTYHIGQVIKCRITSSSPSSKRISLSFVMKPARVSEDAKV
        T GLVTHGWITKIE+HGCFVRFYNGVQGF PR                FELG+EPGSDP S +H+G+V+KCR+TS+   ++RI+L           +  +
Subjt:  TAGLVTHGWITKIERHGCFVRFYNGVQGFAPRQVCCSIHITFELVIFLFELGIEPGSDPSSTYHIGQVIKCRITSSSPSSKRISLSFVMKPARVSEDAKV

Query:  ELGCIVSGVVDEITQTHVTLYINRTGYSRGRISTEHLSDHQAHAALMKSVLKPGYQFEQLLVL----GNFIFSNSFQL
        +LG IVSG++D IT   V + +      +G IS EHL+DH   A L+ S+L+PGY+ ++LLVL     N   S+ + L
Subjt:  ELGCIVSGVVDEITQTHVTLYINRTGYSRGRISTEHLSDHQAHAALMKSVLKPGYQFEQLLVL----GNFIFSNSFQL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAGTGGGATTGAGGAGGAACTCTTCGATCCACACTCTCAGATCCGAGTAGCTAATCCTCTGCTGCCCAAACGCATCAAAGAAAAGGTCCCAACTAGTGCGGGTAA
AATCGCAACTCCAAAGAATATGATCCAAATCTTCCCTTGCCTTCCAACAAAGCATGCAACAAAAGGGGCCAACCAAAGGAACATTCCTTCTCAAGAGCCCGTCAAAGGTA
TTAACTCTACCATGGAGAACTTGCCGAACAAAAAACCTAACCTTCTTCGGCACTTTCACCTTCCACAGAAGAGAAAAGATAGACTCGCTATAGGGCGGAGGATTCAACAA
AGAAGTAAAAAGACTACGGAGAATGACAAGGATGAGTTGGTAAAGAGGGAGAAGAAGGTCAAGGAGGAGATTATCTCTTTTTTCTCGACCCTTTATGGTCTGGAACTGGC
GAGTGCCTTTGAAGGTCCAGTGTTTTCCTACACAGATGTAAAGCCTGGAACATTGATACGTGCTAAAGTTATAATTGTTGATGATTTTGGTGCTATCGTGCAATTTCCTG
GTGGTCTCAAGGCTCTGTGTCCTCTTAGTCACATGTCTGAATTTGAAATTGCTAAACCTCGAAAAAAGTTTAAGGTTGGAGCTGAATTAATTTTCCGTGTGCTTGGTTGC
AAGTCGAAGAGAATAACTGTTACACACAAGAAGGCACTTGTAAAATCAAAATTGGAGGTTCTTAGTTCATATGCTGATGCTACTGCAGGATTAGTGACACATGGCTGGAT
TACGAAGATTGAAAGACATGGTTGTTTTGTCAGGTTTTACAATGGTGTTCAAGGTTTTGCTCCTAGGCAAGTCTGCTGCAGCATCCATATAACTTTTGAACTTGTTATCT
TTCTATTTGAACTCGGAATAGAACCTGGTTCTGATCCAAGTTCAACATATCATATTGGGCAAGTCATCAAATGTAGAATAACAAGCTCTTCTCCTTCCTCCAAGCGTATT
AGCCTTAGTTTTGTAATGAAGCCTGCAAGGGTTTCTGAAGATGCAAAGGTTGAGTTGGGTTGCATTGTTTCGGGTGTGGTTGATGAAATAACCCAGACCCATGTAACATT
ATATATTAATAGAACCGGTTACTCAAGGGGAAGGATATCCACTGAACATTTGTCAGATCATCAGGCGCATGCTGCTTTGATGAAGTCTGTGTTGAAGCCTGGCTATCAAT
TTGAACAACTCCTTGTACTAGGTAATTTTATTTTTTCAAATTCTTTTCAACTTCAAGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATAGTGGGATTGAGGAGGAACTCTTCGATCCACACTCTCAGATCCGAGTAGCTAATCCTCTGCTGCCCAAACGCATCAAAGAAAAGGTCCCAACTAGTGCGGGTAA
AATCGCAACTCCAAAGAATATGATCCAAATCTTCCCTTGCCTTCCAACAAAGCATGCAACAAAAGGGGCCAACCAAAGGAACATTCCTTCTCAAGAGCCCGTCAAAGGTA
TTAACTCTACCATGGAGAACTTGCCGAACAAAAAACCTAACCTTCTTCGGCACTTTCACCTTCCACAGAAGAGAAAAGATAGACTCGCTATAGGGCGGAGGATTCAACAA
AGAAGTAAAAAGACTACGGAGAATGACAAGGATGAGTTGGTAAAGAGGGAGAAGAAGGTCAAGGAGGAGATTATCTCTTTTTTCTCGACCCTTTATGGTCTGGAACTGGC
GAGTGCCTTTGAAGGTCCAGTGTTTTCCTACACAGATGTAAAGCCTGGAACATTGATACGTGCTAAAGTTATAATTGTTGATGATTTTGGTGCTATCGTGCAATTTCCTG
GTGGTCTCAAGGCTCTGTGTCCTCTTAGTCACATGTCTGAATTTGAAATTGCTAAACCTCGAAAAAAGTTTAAGGTTGGAGCTGAATTAATTTTCCGTGTGCTTGGTTGC
AAGTCGAAGAGAATAACTGTTACACACAAGAAGGCACTTGTAAAATCAAAATTGGAGGTTCTTAGTTCATATGCTGATGCTACTGCAGGATTAGTGACACATGGCTGGAT
TACGAAGATTGAAAGACATGGTTGTTTTGTCAGGTTTTACAATGGTGTTCAAGGTTTTGCTCCTAGGCAAGTCTGCTGCAGCATCCATATAACTTTTGAACTTGTTATCT
TTCTATTTGAACTCGGAATAGAACCTGGTTCTGATCCAAGTTCAACATATCATATTGGGCAAGTCATCAAATGTAGAATAACAAGCTCTTCTCCTTCCTCCAAGCGTATT
AGCCTTAGTTTTGTAATGAAGCCTGCAAGGGTTTCTGAAGATGCAAAGGTTGAGTTGGGTTGCATTGTTTCGGGTGTGGTTGATGAAATAACCCAGACCCATGTAACATT
ATATATTAATAGAACCGGTTACTCAAGGGGAAGGATATCCACTGAACATTTGTCAGATCATCAGGCGCATGCTGCTTTGATGAAGTCTGTGTTGAAGCCTGGCTATCAAT
TTGAACAACTCCTTGTACTAGGTAATTTTATTTTTTCAAATTCTTTTCAACTTCAAGTTTAA
Protein sequenceShow/hide protein sequence
MDSGIEEELFDPHSQIRVANPLLPKRIKEKVPTSAGKIATPKNMIQIFPCLPTKHATKGANQRNIPSQEPVKGINSTMENLPNKKPNLLRHFHLPQKRKDRLAIGRRIQQ
RSKKTTENDKDELVKREKKVKEEIISFFSTLYGLELASAFEGPVFSYTDVKPGTLIRAKVIIVDDFGAIVQFPGGLKALCPLSHMSEFEIAKPRKKFKVGAELIFRVLGC
KSKRITVTHKKALVKSKLEVLSSYADATAGLVTHGWITKIERHGCFVRFYNGVQGFAPRQVCCSIHITFELVIFLFELGIEPGSDPSSTYHIGQVIKCRITSSSPSSKRI
SLSFVMKPARVSEDAKVELGCIVSGVVDEITQTHVTLYINRTGYSRGRISTEHLSDHQAHAALMKSVLKPGYQFEQLLVLGNFIFSNSFQLQV