; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg002251 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg002251
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionE3 ubiquitin-protein ligase At1g63170-like
Genome locationscaffold1:31684861..31687101
RNA-Seq ExpressionSpg002251
SyntenySpg002251
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605180.1 E3 ubiquitin-protein ligase RING1, partial [Cucurbita argyrosperma subsp. sororia]2.8e-1669.7Show/hide
Query:  QVLQVRVGYVRRVISRSPSAGLPYDILGESPWSPVADGVFPLPLRELEDPLLCEAYVVELLSWFNL
        Q+LQVR+GY  R+ISRSP +GLPYDIL E P +P+AD +FPLPLRELEDPL C AY+VEL+S  NL
Subjt:  QVLQVRVGYVRRVISRSPSAGLPYDILGESPWSPVADGVFPLPLRELEDPLLCEAYVVELLSWFNL

KAG6605222.1 E3 ubiquitin-protein ligase AMFR, partial [Cucurbita argyrosperma subsp. sororia]1.7e-1869.01Show/hide
Query:  QVLQVRVGYVRRVISRSPSAGLPYDILGESPWSPVADGVFPLPLRELEDPLLCEAYVVELLSWFNLQRHGW
        Q+LQ+R+GY  R+ISRSPSAGLPYDIL E+P +P+AD +FPLPLRELEDPL C AY+VEL+S FNL    W
Subjt:  QVLQVRVGYVRRVISRSPSAGLPYDILGESPWSPVADGVFPLPLRELEDPLLCEAYVVELLSWFNLQRHGW

XP_022947841.1 NEP1-interacting protein-like 1 [Cucurbita moschata]1.7e-1869.01Show/hide
Query:  QVLQVRVGYVRRVISRSPSAGLPYDILGESPWSPVADGVFPLPLRELEDPLLCEAYVVELLSWFNLQRHGW
        Q+LQ+R+GY  R+ISRSPSAGLPYDIL E+P +P+AD +FPLPLRELEDPL C AY+VEL+S FNL    W
Subjt:  QVLQVRVGYVRRVISRSPSAGLPYDILGESPWSPVADGVFPLPLRELEDPLLCEAYVVELLSWFNLQRHGW

XP_022947853.1 E3 ubiquitin-protein ligase MBR2-like [Cucurbita moschata]1.8e-1568.18Show/hide
Query:  QVLQVRVGYVRRVISRSPSAGLPYDILGESPWSPVADGVFPLPLRELEDPLLCEAYVVELLSWFNL
        Q+LQVR+GY  R+ISRSP +GLPYDIL E+P + +AD +FPLPLRELEDPL C AY+VEL+S  NL
Subjt:  QVLQVRVGYVRRVISRSPSAGLPYDILGESPWSPVADGVFPLPLRELEDPLLCEAYVVELLSWFNL

XP_023006830.1 E3 ubiquitin-protein ligase At1g63170-like [Cucurbita maxima]1.5e-1771.21Show/hide
Query:  QVLQVRVGYVRRVISRSPSAGLPYDILGESPWSPVADGVFPLPLRELEDPLLCEAYVVELLSWFNL
        Q+LQVR+GY  R+IS+SPSAGLPYDIL E+P +P+AD +FPLPLRELEDPL C AY+VEL+S  NL
Subjt:  QVLQVRVGYVRRVISRSPSAGLPYDILGESPWSPVADGVFPLPLRELEDPLLCEAYVVELLSWFNL

TrEMBL top hitse value%identityAlignment
A0A0A0L2F8 Uncharacterized protein1.5e-1258.21Show/hide
Query:  QQVLQVRVGYVRRVISRSPSAGLPYDILGESPWSPVADGVFPLPLRELEDPLLCEAYVVELLSWFNL
        +Q LQ+R+G + R++S SPSAGLPY+IL ES   PV +  FPLPLR++ED  LCE Y+++LLS FNL
Subjt:  QQVLQVRVGYVRRVISRSPSAGLPYDILGESPWSPVADGVFPLPLRELEDPLLCEAYVVELLSWFNL

A0A6J1G7L1 NEP1-interacting protein-like 18.3e-1969.01Show/hide
Query:  QVLQVRVGYVRRVISRSPSAGLPYDILGESPWSPVADGVFPLPLRELEDPLLCEAYVVELLSWFNLQRHGW
        Q+LQ+R+GY  R+ISRSPSAGLPYDIL E+P +P+AD +FPLPLRELEDPL C AY+VEL+S FNL    W
Subjt:  QVLQVRVGYVRRVISRSPSAGLPYDILGESPWSPVADGVFPLPLRELEDPLLCEAYVVELLSWFNLQRHGW

A0A6J1G7R8 E3 ubiquitin-protein ligase MBR2-like8.6e-1668.18Show/hide
Query:  QVLQVRVGYVRRVISRSPSAGLPYDILGESPWSPVADGVFPLPLRELEDPLLCEAYVVELLSWFNL
        Q+LQVR+GY  R+ISRSP +GLPYDIL E+P + +AD +FPLPLRELEDPL C AY+VEL+S  NL
Subjt:  QVLQVRVGYVRRVISRSPSAGLPYDILGESPWSPVADGVFPLPLRELEDPLLCEAYVVELLSWFNL

A0A6J1L186 NEP1-interacting protein-like 11.5e-1566.67Show/hide
Query:  QVLQVRVGYVRRVISRSPSAGLPYDILGESPWSPVADGVFPLPLRELEDPLLCEAYVVELLSWFNL
        Q L+ R+ Y  R+ISRSPSAGLPYDIL E+P +P+AD +FPLPLRELEDPL C AY++EL+S  NL
Subjt:  QVLQVRVGYVRRVISRSPSAGLPYDILGESPWSPVADGVFPLPLRELEDPLLCEAYVVELLSWFNL

A0A6J1L191 E3 ubiquitin-protein ligase At1g63170-like7.1e-1871.21Show/hide
Query:  QVLQVRVGYVRRVISRSPSAGLPYDILGESPWSPVADGVFPLPLRELEDPLLCEAYVVELLSWFNL
        Q+LQVR+GY  R+IS+SPSAGLPYDIL E+P +P+AD +FPLPLRELEDPL C AY+VEL+S  NL
Subjt:  QVLQVRVGYVRRVISRSPSAGLPYDILGESPWSPVADGVFPLPLRELEDPLLCEAYVVELLSWFNL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCGCTATCAGCGGCTGCGACGGGCGTTCCAGATCTAGTTTTCGAGCTTCAACGAGTGGTGTTCGACGATGGGTTCGCGTGCGACCTACGAGCGAAGACGGGTGTGC
GGATCTGAAGTCACAGCCCACACCCACCATGTCTTTCTTCTCCACCACTTCCTGCCTCCAATACTGTATCCGCGCCACTCGAAACACCACCGTCGATCAACTTCTCAAAT
TCCCACACCAAATCCTTCAACAAACTTCAACTTCTCAAACTGTTGTTGTAGCCGATCAACAAGTCCTCCAAGTCCGGGTGGGGTATGTCAGGCGTGTGATCTCCCGGTCG
CCGTCCGCCGGACTTCCATACGACATCCTGGGAGAAAGTCCGTGGAGTCCAGTGGCGGATGGGGTGTTCCCTCTCCCTCTTCGAGAGCTGGAAGATCCATTGTTGTGCGA
GGCGTACGTAGTTGAACTGCTGTCGTGGTTCAACCTGCAACGTCATGGCTGGGAAGATCAGGTCGTTGGTCGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTCGCTATCAGCGGCTGCGACGGGCGTTCCAGATCTAGTTTTCGAGCTTCAACGAGTGGTGTTCGACGATGGGTTCGCGTGCGACCTACGAGCGAAGACGGGTGTGC
GGATCTGAAGTCACAGCCCACACCCACCATGTCTTTCTTCTCCACCACTTCCTGCCTCCAATACTGTATCCGCGCCACTCGAAACACCACCGTCGATCAACTTCTCAAAT
TCCCACACCAAATCCTTCAACAAACTTCAACTTCTCAAACTGTTGTTGTAGCCGATCAACAAGTCCTCCAAGTCCGGGTGGGGTATGTCAGGCGTGTGATCTCCCGGTCG
CCGTCCGCCGGACTTCCATACGACATCCTGGGAGAAAGTCCGTGGAGTCCAGTGGCGGATGGGGTGTTCCCTCTCCCTCTTCGAGAGCTGGAAGATCCATTGTTGTGCGA
GGCGTACGTAGTTGAACTGCTGTCGTGGTTCAACCTGCAACGTCATGGCTGGGAAGATCAGGTCGTTGGTCGGTGA
Protein sequenceShow/hide protein sequence
MLAISGCDGRSRSSFRASTSGVRRWVRVRPTSEDGCADLKSQPTPTMSFFSTTSCLQYCIRATRNTTVDQLLKFPHQILQQTSTSQTVVVADQQVLQVRVGYVRRVISRS
PSAGLPYDILGESPWSPVADGVFPLPLRELEDPLLCEAYVVELLSWFNLQRHGWEDQVVGR