; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg002253 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg002253
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon opus
Genome locationscaffold1:30601787..30605531
RNA-Seq ExpressionSpg002253
SyntenySpg002253
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_030478190.1 uncharacterized protein LOC115695250 [Cannabis sativa]4.9e-1258.97Show/hide
Query:  PQLQQSMQVQPQSTANLKNLMREMMTKNDAVIQSQTASLRSLESQIGQLAKEMRNRLLGALPSNTKNPTREGLGKDKA
        P+ QQ  Q Q   T++L+NLMR+ M KNDA+IQSQ ASLR+LE Q+GQLA +++NRL G LPS+TKNP R+G    KA
Subjt:  PQLQQSMQVQPQSTANLKNLMREMMTKNDAVIQSQTASLRSLESQIGQLAKEMRNRLLGALPSNTKNPTREGLGKDKA

XP_030495102.1 uncharacterized protein LOC115710889 [Cannabis sativa]4.1e-1157.69Show/hide
Query:  PQLQQSMQVQPQSTANLKNLMREMMTKNDAVIQSQTASLRSLESQIGQLAKEMRNRLLGALPSNTKNPTREGLGKDKA
        P+ QQ  Q Q   T++L++LMR+ MTKNDAVIQSQ ASLR+LE Q+GQLA +++NR  G LPS+T+NP R+G    KA
Subjt:  PQLQQSMQVQPQSTANLKNLMREMMTKNDAVIQSQTASLRSLESQIGQLAKEMRNRLLGALPSNTKNPTREGLGKDKA

XP_030498047.1 uncharacterized protein LOC115713707 [Cannabis sativa]7.0e-1157.69Show/hide
Query:  PQLQQSMQVQPQSTANLKNLMREMMTKNDAVIQSQTASLRSLESQIGQLAKEMRNRLLGALPSNTKNPTREGLGKDKA
        P+ QQS Q Q   T++L++LMR+ M KNDAVIQSQ ASLR+LE Q+GQLA  ++NR  G LPS+T+NP R+G    KA
Subjt:  PQLQQSMQVQPQSTANLKNLMREMMTKNDAVIQSQTASLRSLESQIGQLAKEMRNRLLGALPSNTKNPTREGLGKDKA

XP_030509134.1 uncharacterized protein LOC115723804 [Cannabis sativa]4.1e-1157.69Show/hide
Query:  PQLQQSMQVQPQSTANLKNLMREMMTKNDAVIQSQTASLRSLESQIGQLAKEMRNRLLGALPSNTKNPTREGLGKDKA
        P+ QQ  Q Q   T++L++LMR+ M KNDAVIQSQ ASLR+LE Q+GQLA +++NR  G LPS+TKNP R+G    KA
Subjt:  PQLQQSMQVQPQSTANLKNLMREMMTKNDAVIQSQTASLRSLESQIGQLAKEMRNRLLGALPSNTKNPTREGLGKDKA

XP_030509259.1 uncharacterized protein LOC115723937 [Cannabis sativa]1.6e-1056.41Show/hide
Query:  PQLQQSMQVQPQSTANLKNLMREMMTKNDAVIQSQTASLRSLESQIGQLAKEMRNRLLGALPSNTKNPTREGLGKDKA
        P+ QQ  Q Q   T++L++LMR+ M KNDAVIQSQ ASLR+LE Q+GQLA +++NR  G LPS+T+NP R+G    KA
Subjt:  PQLQQSMQVQPQSTANLKNLMREMMTKNDAVIQSQTASLRSLESQIGQLAKEMRNRLLGALPSNTKNPTREGLGKDKA

TrEMBL top hitse value%identityAlignment
A0A5B6VWJ0 Retroelement pol polyprotein-like8.4e-1054.43Show/hide
Query:  PNNPQLQQSMQVQPQSTANLKNLMREMMTKNDAVIQSQTASLRSLESQIGQLAKEMRNRLLGALPSNTKNPTREGLGKD
        PN PQ  Q + VQ +++ +L++L++  M KNDA+IQSQ A+L++LE+Q+GQLA E+RNRL GALPS+T+NP    LGK+
Subjt:  PNNPQLQQSMQVQPQSTANLKNLMREMMTKNDAVIQSQTASLRSLESQIGQLAKEMRNRLLGALPSNTKNPTREGLGKD

A0A6J1DYG0 uncharacterized protein LOC1110257642.3e-0744.32Show/hide
Query:  QRVAQPNNPQLQQSMQVQP--QSTANLKNLMREMMTKNDAVIQSQTASLRSLESQIGQLAKEMRNRLLGALPSNTKNPTREGLGKDKA
        Q+   P   +  Q  Q  P   + +NL+N+M+E M + DAVIQSQ AS+R+ E+Q+GQLA E++NR  G+ P +T+ P REG  + KA
Subjt:  QRVAQPNNPQLQQSMQVQP--QSTANLKNLMREMMTKNDAVIQSQTASLRSLESQIGQLAKEMRNRLLGALPSNTKNPTREGLGKDKA

A0A6J1G7Q6 uncharacterized protein LOC1114515987.8e-0851.28Show/hide
Query:  AQPNNPQLQQSMQVQPQSTANLKNLMREMMTKNDAVIQSQTASLRSLESQIGQLAKEMRNRLLGALPSNTKNPTREGL
        +Q    Q + + Q Q  S   L++L++E M +NDAVIQSQ  SLR+LE Q+GQLA E+RNR LG LP++T+ P REG+
Subjt:  AQPNNPQLQQSMQVQPQSTANLKNLMREMMTKNDAVIQSQTASLRSLESQIGQLAKEMRNRLLGALPSNTKNPTREGL

A0A6J1GJ68 uncharacterized protein LOC1114543446.0e-0851.95Show/hide
Query:  AQPNNPQLQQSMQVQPQSTANLKNLMREMMTKNDAVIQSQTASLRSLESQIGQLAKEMRNRLLGALPSNTKNPTREG
        +Q  N Q +   Q Q  S  ++++L++E M KND VIQSQ ASL++LE Q+GQLA E+RNR LG LP++T+ P REG
Subjt:  AQPNNPQLQQSMQVQPQSTANLKNLMREMMTKNDAVIQSQTASLRSLESQIGQLAKEMRNRLLGALPSNTKNPTREG

A0A6J1H7K8 uncharacterized protein LOC1114611671.6e-0850.6Show/hide
Query:  AQPNNPQLQQSMQVQPQSTANLKNLMREMMTKNDAVIQSQTASLRSLESQIGQLAKEMRNRLLGALPSNTKNPTREGLGKDKA
        +Q    Q + + Q Q     +L++L++E M KND VIQSQ ASLR+LE Q+GQLA E+RNR LG LPS+T+ P REG+ + +A
Subjt:  AQPNNPQLQQSMQVQPQSTANLKNLMREMMTKNDAVIQSQTASLRSLESQIGQLAKEMRNRLLGALPSNTKNPTREGLGKDKA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTTCCCAACCTTGATCACCAAGATATGCAGGCTTGCAGGAGTGGAGCCAGAAGAGAAAGAAGAAAAAGAAGCAGCCCGGACTTCGATCGACTTGAGCTTAATCAA
GAAGCTCATAGCCAATTCCAAGCAGAAGGTGACTTCTCCTGAAAAGAAGGCTCAAGCAACCCCTCCTACAGCTCAAACCTCGATATCTCCTGAAGAAGCCACTGCTGCAA
AAGAAGATGCAACCGCAAATCCCACTAATCTAGAAGACTTTGCAAGGAGGATGTGCCCACAAGAGAAGATTAAAGGTAGCGGAGCAAAAGAAGTTAAAGCTGAAGAATTG
TGCCGGCATCTGGACCTGGGGATACTTGTCAAAGTTGTGCATATGAAGAATTGCGCCGGAGATGCGGCCGCAACTGGGCTTTCCGACAGAATACTGAGATTTCGCGGGAT
CTTCACAGAATCGTCCAAAAATCCCCAATCTGGTATCAAATCTCTGAAGATTGTGGATTCTTACCTTCCAAGGCCTTCTCAGACTGATCTTGACTGCCAATCTTACCTTC
CAAGTTTGTATTTAGCTGATGGCCGAAAGTTGCGGGCGCAACTGAGAGAGGCTATCTGCACCATGTCTATGTGGGCAACAGATATAGTGTTTCTCAGCCGTCTGCATTGC
CTGAGTGATTTGCGGGCGCGTAGGTGGGTGGATCTGTTTGCTGATTGGATTGGTGAAATTGCGATGGAGCCACCTGTTGGAGACCCTCTCGATGCGCAGCAAAGAGTAGC
ACAACCCAACAACCCGCAATTGCAGCAGTCGATGCAAGTGCAACCCCAATCCACAGCAAACTTGAAGAATCTTATGAGGGAGATGATGACTAAGAATGATGCTGTAATTC
AAAGTCAAACAGCTTCCTTAAGGAGTCTTGAATCTCAGATTGGGCAGCTGGCTAAGGAAATGAGGAACAGACTATTAGGGGCCCTACCAAGCAATACAAAGAATCCTACA
AGAGAAGGCCTAGGCAAGGATAAGGCCTCCATTGATCCCAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTCTTCCCAACCTTGATCACCAAGATATGCAGGCTTGCAGGAGTGGAGCCAGAAGAGAAAGAAGAAAAAGAAGCAGCCCGGACTTCGATCGACTTGAGCTTAATCAA
GAAGCTCATAGCCAATTCCAAGCAGAAGGTGACTTCTCCTGAAAAGAAGGCTCAAGCAACCCCTCCTACAGCTCAAACCTCGATATCTCCTGAAGAAGCCACTGCTGCAA
AAGAAGATGCAACCGCAAATCCCACTAATCTAGAAGACTTTGCAAGGAGGATGTGCCCACAAGAGAAGATTAAAGGTAGCGGAGCAAAAGAAGTTAAAGCTGAAGAATTG
TGCCGGCATCTGGACCTGGGGATACTTGTCAAAGTTGTGCATATGAAGAATTGCGCCGGAGATGCGGCCGCAACTGGGCTTTCCGACAGAATACTGAGATTTCGCGGGAT
CTTCACAGAATCGTCCAAAAATCCCCAATCTGGTATCAAATCTCTGAAGATTGTGGATTCTTACCTTCCAAGGCCTTCTCAGACTGATCTTGACTGCCAATCTTACCTTC
CAAGTTTGTATTTAGCTGATGGCCGAAAGTTGCGGGCGCAACTGAGAGAGGCTATCTGCACCATGTCTATGTGGGCAACAGATATAGTGTTTCTCAGCCGTCTGCATTGC
CTGAGTGATTTGCGGGCGCGTAGGTGGGTGGATCTGTTTGCTGATTGGATTGGTGAAATTGCGATGGAGCCACCTGTTGGAGACCCTCTCGATGCGCAGCAAAGAGTAGC
ACAACCCAACAACCCGCAATTGCAGCAGTCGATGCAAGTGCAACCCCAATCCACAGCAAACTTGAAGAATCTTATGAGGGAGATGATGACTAAGAATGATGCTGTAATTC
AAAGTCAAACAGCTTCCTTAAGGAGTCTTGAATCTCAGATTGGGCAGCTGGCTAAGGAAATGAGGAACAGACTATTAGGGGCCCTACCAAGCAATACAAAGAATCCTACA
AGAGAAGGCCTAGGCAAGGATAAGGCCTCCATTGATCCCAAGTAA
Protein sequenceShow/hide protein sequence
MFFPTLITKICRLAGVEPEEKEEKEAARTSIDLSLIKKLIANSKQKVTSPEKKAQATPPTAQTSISPEEATAAKEDATANPTNLEDFARRMCPQEKIKGSGAKEVKAEEL
CRHLDLGILVKVVHMKNCAGDAAATGLSDRILRFRGIFTESSKNPQSGIKSLKIVDSYLPRPSQTDLDCQSYLPSLYLADGRKLRAQLREAICTMSMWATDIVFLSRLHC
LSDLRARRWVDLFADWIGEIAMEPPVGDPLDAQQRVAQPNNPQLQQSMQVQPQSTANLKNLMREMMTKNDAVIQSQTASLRSLESQIGQLAKEMRNRLLGALPSNTKNPT
REGLGKDKASIDPK