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Spg002281 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg002281
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold1:30776606..30787916
RNA-Seq ExpressionSpg002281
SyntenySpg002281
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4375842.1 hypothetical protein G4B88_026421 [Cannabis sativa]3.7e-0933.1Show/hide
Query:  MLPTTHDSTVSREWGFLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCKRAGVPV--GDVILFDKGFID-TPNLARLQRTQEVRQGGLVY
        +LPT+HDSTVSRE  ++ + I++   I+VGK+I  EI  C  +  GKLFF   IT  C+ A VP+   +  +  KG +   P+ A  + T          
Subjt:  MLPTTHDSTVSREWGFLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCKRAGVPV--GDVILFDKGFID-TPNLARLQRTQEVRQGGLVY

Query:  DINTILEQLALSASRQEFAERQALTFWNYVKSRDANLKKALQENF
        D   + E+L+   + Q+    +  T WNY + RD  + + L+ N+
Subjt:  DINTILEQLALSASRQEFAERQALTFWNYVKSRDANLKKALQENF

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]3.4e-1533.53Show/hide
Query:  MLPTTHDSTVSREWGFLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCKRAGVP--VGDVILFDKGFIDTPNLARLQR---TQEVRQ---
        +LPTTH  TVS++   L  ++L   SI+VG++I +EI  C  +K G LFFP+ IT LC+ A  P  V +  L + G ID   +AR+ +   T+  +Q   
Subjt:  MLPTTHDSTVSREWGFLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCKRAGVP--VGDVILFDKGFIDTPNLARLQR---TQEVRQ---

Query:  ------------GGLVYDINTILEQLALSASRQ-------EFAERQALTFWNYVKSRDANLKKALQENFSKPL
                    G ++  +  + ++L+    +Q       +   +Q   FW Y K RD  LKKALQ NF++P+
Subjt:  ------------GGLVYDINTILEQLALSASRQ-------EFAERQALTFWNYVKSRDANLKKALQENFSKPL

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]5.8e-1532.37Show/hide
Query:  MLPTTHDSTVSREWGFLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCKRAGVP--VGDVILFDKGFIDTPNLARLQRTQEVR-------
        +LPTTH  TVS++   L +++L   SI+VG++I +EI  C  +K G LFFP+ IT LC+ A  P  V +  L   G ID   +AR+ +  +         
Subjt:  MLPTTHDSTVSREWGFLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCKRAGVP--VGDVILFDKGFIDTPNLARLQRTQEVR-------

Query:  -----------QGGLVYDINTILEQLALSASRQ-------EFAERQALTFWNYVKSRDANLKKALQENFSKPL
                    G ++  +  + ++L+    +Q       +   +Q   FW Y K RD  LKKALQ NF++P+
Subjt:  -----------QGGLVYDINTILEQLALSASRQ-------EFAERQALTFWNYVKSRDANLKKALQENFSKPL

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]1.1e-1636.88Show/hide
Query:  MLPTTHDSTVSREWGFLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCKRAGVPVGDVILFDKGFIDTPNLARLQR---TQEVRQGGLVY
        +LPTTH   VS++   L  ++L   SI+VG++I +EI  C  +K G LFFP+ IT LC+ A   V +  L + G ID   +AR+ +   T+  +Q     
Subjt:  MLPTTHDSTVSREWGFLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCKRAGVPVGDVILFDKGFIDTPNLARLQR---TQEVRQGGLVY

Query:  -----------DINTILEQLALSASRQEFAERQALTFWNYVKSRDANLKKALQENFSKPL
                   D+   L+ L    S+QE   +Q   FW Y K RD  LKKALQ NF++P+
Subjt:  -----------DINTILEQLALSASRQEFAERQALTFWNYVKSRDANLKKALQENFSKPL

TYG52543.1 hypothetical protein ES288_D09G036700v1 [Gossypium darwinii]5.6e-1043.16Show/hide
Query:  LPTTHDSTVSREWGFLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCKRAGVPVGDVI--LFDKGFIDTPNLARL-QRTQEVRQG
        +P +H ST+S EW  L +AIL   SI+VGKII+ EI  C KKK    +FP+ IT LC +A V +   +   + +G I   +L RL +R  E+ QG
Subjt:  LPTTHDSTVSREWGFLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCKRAGVPVGDVI--LFDKGFIDTPNLARL-QRTQEVRQG

TrEMBL top hitse value%identityAlignment
A0A2P5BCG4 Uncharacterized protein (Fragment)1.7e-1533.53Show/hide
Query:  MLPTTHDSTVSREWGFLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCKRAGVP--VGDVILFDKGFIDTPNLARLQR---TQEVRQ---
        +LPTTH  TVS++   L  ++L   SI+VG++I +EI  C  +K G LFFP+ IT LC+ A  P  V +  L + G ID   +AR+ +   T+  +Q   
Subjt:  MLPTTHDSTVSREWGFLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCKRAGVP--VGDVILFDKGFIDTPNLARLQR---TQEVRQ---

Query:  ------------GGLVYDINTILEQLALSASRQ-------EFAERQALTFWNYVKSRDANLKKALQENFSKPL
                    G ++  +  + ++L+    +Q       +   +Q   FW Y K RD  LKKALQ NF++P+
Subjt:  ------------GGLVYDINTILEQLALSASRQ-------EFAERQALTFWNYVKSRDANLKKALQENFSKPL

A0A2P5CEY2 Uncharacterized protein2.8e-1532.37Show/hide
Query:  MLPTTHDSTVSREWGFLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCKRAGVP--VGDVILFDKGFIDTPNLARLQRTQEVR-------
        +LPTTH  TVS++   L +++L   SI+VG++I +EI  C  +K G LFFP+ IT LC+ A  P  V +  L   G ID   +AR+ +  +         
Subjt:  MLPTTHDSTVSREWGFLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCKRAGVP--VGDVILFDKGFIDTPNLARLQRTQEVR-------

Query:  -----------QGGLVYDINTILEQLALSASRQ-------EFAERQALTFWNYVKSRDANLKKALQENFSKPL
                    G ++  +  + ++L+    +Q       +   +Q   FW Y K RD  LKKALQ NF++P+
Subjt:  -----------QGGLVYDINTILEQLALSASRQ-------EFAERQALTFWNYVKSRDANLKKALQENFSKPL

A0A2P5DXM3 Uncharacterized protein5.1e-1736.88Show/hide
Query:  MLPTTHDSTVSREWGFLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCKRAGVPVGDVILFDKGFIDTPNLARLQR---TQEVRQGGLVY
        +LPTTH   VS++   L  ++L   SI+VG++I +EI  C  +K G LFFP+ IT LC+ A   V +  L + G ID   +AR+ +   T+  +Q     
Subjt:  MLPTTHDSTVSREWGFLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCKRAGVPVGDVILFDKGFIDTPNLARLQR---TQEVRQGGLVY

Query:  -----------DINTILEQLALSASRQEFAERQALTFWNYVKSRDANLKKALQENFSKPL
                   D+   L+ L    S+QE   +Q   FW Y K RD  LKKALQ NF++P+
Subjt:  -----------DINTILEQLALSASRQEFAERQALTFWNYVKSRDANLKKALQENFSKPL

A0A5D2B8V0 Uncharacterized protein2.7e-1043.16Show/hide
Query:  LPTTHDSTVSREWGFLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCKRAGVPVGDVI--LFDKGFIDTPNLARL-QRTQEVRQG
        +P +H ST+S EW  L +AIL   SI+VGKII+ EI  C KKK    +FP+ IT LC +A V +   +   + +G I   +L RL +R  E+ QG
Subjt:  LPTTHDSTVSREWGFLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCKRAGVPVGDVI--LFDKGFIDTPNLARL-QRTQEVRQG

A0A7J6FZ22 Uncharacterized protein1.8e-0933.1Show/hide
Query:  MLPTTHDSTVSREWGFLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCKRAGVPV--GDVILFDKGFID-TPNLARLQRTQEVRQGGLVY
        +LPT+HDSTVSRE  ++ + I++   I+VGK+I  EI  C  +  GKLFF   IT  C+ A VP+   +  +  KG +   P+ A  + T          
Subjt:  MLPTTHDSTVSREWGFLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCKRAGVPV--GDVILFDKGFID-TPNLARLQRTQEVRQGGLVY

Query:  DINTILEQLALSASRQEFAERQALTFWNYVKSRDANLKKALQENF
        D   + E+L+   + Q+    +  T WNY + RD  + + L+ N+
Subjt:  DINTILEQLALSASRQEFAERQALTFWNYVKSRDANLKKALQENF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCCAACGACTCATGACTCGACGGTCTCTAGGGAATGGGGTTTTCTGGCTTTCGCGATTTTGCGGTCTCTCAGCATTGATGTAGGGAAGATTATTGTTAATGAGAT
ATCTGGTTGTTGGAAGAAGAAAGTGGGGAAGCTGTTTTTCCCGAATACCATTACCATGCTTTGCAAGCGAGCAGGGGTTCCAGTAGGAGATGTTATTTTATTTGACAAGG
GATTCATCGACACGCCTAACTTGGCACGGCTTCAGCGTACGCAAGAGGTACGTCAGGGTGGGCTTGTCTACGACATCAACACGATTTTAGAACAACTGGCACTGTCGGCC
AGTAGGCAAGAGTTTGCCGAGAGGCAAGCTTTAACCTTCTGGAACTATGTTAAAAGTCGTGATGCCAATCTGAAGAAGGCGCTGCAGGAGAATTTTTCCAAACCCTTGGA
CTGGTTAAGCTTAGTTAGATCAAGAGCTAAGTTGTGGCAAGTTCTTAGAATTGAGTTAAAAGTGGTGATTATTTGTCCATGCCGGAAGAATTATTTTGCTGCAGCAGAGC
TTGGTTTTGCAGAATGCTCAAGTTACTTCCACCTTTGGGAGCCGAATAGAGGAGAGAGATTGGAGACCATCAAGGAAACCATCATTTGCAAGCTGATCAAGGGAATTAAT
ATTTTCTTGTATTATTTTGTGAATATGGATATGCTTACTCAGATTGTAACGTTAATTGAGCTTAGGCTATGTCGGGAGTCGATCACGCTAACTGGTGTTAATTCGGGCCA
ATTACGAAGTTTTGGAGCCATCTCGGTGTCTTGGACGGTGAGGAGAGTGGCCAATACCGAGTGGGAGGCTGGGGACATGACAACACAAGAAGGAATTCACGCCTTCCCAC
TTATAGGAGAAGTAGATGAGTGTCCATTAGGTCCCCCTGCTAGCTCCGGGGAAGATCAATTGGTGGTGTCCCAACTGTTGTTGCTTGGTCCCTATGAAATCAAGAAAGGC
GTTCTTGATATTTCAGAGACGACAACGACGCGGAAGCGAATTGGGATCGCCGTAGGGGAATGCGTCGTCGATCTGAACGTCGGTGTTGGACTTGTCAGATCTGAACGCCG
CTGGAGTGTGGGGCTAGTCAGATCGGAACGTCGTGGAGTCTTTGCCCTTCTCAGATCTGGAACACCGTCGTCAAACTCGCTCAGCTCAGATCTGGAACGTCGTCGTCGAA
CTCACTGGAGCAAGCAGATCTGGAACGGGGCGGTGGCCGGAACGGGCGTCGAACTCACTAGAGCAAGCAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTTCCAACGACTCATGACTCGACGGTCTCTAGGGAATGGGGTTTTCTGGCTTTCGCGATTTTGCGGTCTCTCAGCATTGATGTAGGGAAGATTATTGTTAATGAGAT
ATCTGGTTGTTGGAAGAAGAAAGTGGGGAAGCTGTTTTTCCCGAATACCATTACCATGCTTTGCAAGCGAGCAGGGGTTCCAGTAGGAGATGTTATTTTATTTGACAAGG
GATTCATCGACACGCCTAACTTGGCACGGCTTCAGCGTACGCAAGAGGTACGTCAGGGTGGGCTTGTCTACGACATCAACACGATTTTAGAACAACTGGCACTGTCGGCC
AGTAGGCAAGAGTTTGCCGAGAGGCAAGCTTTAACCTTCTGGAACTATGTTAAAAGTCGTGATGCCAATCTGAAGAAGGCGCTGCAGGAGAATTTTTCCAAACCCTTGGA
CTGGTTAAGCTTAGTTAGATCAAGAGCTAAGTTGTGGCAAGTTCTTAGAATTGAGTTAAAAGTGGTGATTATTTGTCCATGCCGGAAGAATTATTTTGCTGCAGCAGAGC
TTGGTTTTGCAGAATGCTCAAGTTACTTCCACCTTTGGGAGCCGAATAGAGGAGAGAGATTGGAGACCATCAAGGAAACCATCATTTGCAAGCTGATCAAGGGAATTAAT
ATTTTCTTGTATTATTTTGTGAATATGGATATGCTTACTCAGATTGTAACGTTAATTGAGCTTAGGCTATGTCGGGAGTCGATCACGCTAACTGGTGTTAATTCGGGCCA
ATTACGAAGTTTTGGAGCCATCTCGGTGTCTTGGACGGTGAGGAGAGTGGCCAATACCGAGTGGGAGGCTGGGGACATGACAACACAAGAAGGAATTCACGCCTTCCCAC
TTATAGGAGAAGTAGATGAGTGTCCATTAGGTCCCCCTGCTAGCTCCGGGGAAGATCAATTGGTGGTGTCCCAACTGTTGTTGCTTGGTCCCTATGAAATCAAGAAAGGC
GTTCTTGATATTTCAGAGACGACAACGACGCGGAAGCGAATTGGGATCGCCGTAGGGGAATGCGTCGTCGATCTGAACGTCGGTGTTGGACTTGTCAGATCTGAACGCCG
CTGGAGTGTGGGGCTAGTCAGATCGGAACGTCGTGGAGTCTTTGCCCTTCTCAGATCTGGAACACCGTCGTCAAACTCGCTCAGCTCAGATCTGGAACGTCGTCGTCGAA
CTCACTGGAGCAAGCAGATCTGGAACGGGGCGGTGGCCGGAACGGGCGTCGAACTCACTAGAGCAAGCAAGTAG
Protein sequenceShow/hide protein sequence
MLPTTHDSTVSREWGFLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCKRAGVPVGDVILFDKGFIDTPNLARLQRTQEVRQGGLVYDINTILEQLALSA
SRQEFAERQALTFWNYVKSRDANLKKALQENFSKPLDWLSLVRSRAKLWQVLRIELKVVIICPCRKNYFAAAELGFAECSSYFHLWEPNRGERLETIKETIICKLIKGIN
IFLYYFVNMDMLTQIVTLIELRLCRESITLTGVNSGQLRSFGAISVSWTVRRVANTEWEAGDMTTQEGIHAFPLIGEVDECPLGPPASSGEDQLVVSQLLLLGPYEIKKG
VLDISETTTTRKRIGIAVGECVVDLNVGVGLVRSERRWSVGLVRSERRGVFALLRSGTPSSNSLSSDLERRRRTHWSKQIWNGAVAGTGVELTRASK