CuGenDBv2

Gene ID	Spg002294
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	RNA polymerase II transcriptional coactivator KIWI-like
Genome location	scaffold1:32325885..32333166
RNA-Seq Expression	Spg002294
Synteny	Spg002294
Gene Ontology terms	GO:0060261 - positive regulation of transcription initiation from RNA polymerase II promoter (biological process) GO:0005634 - nucleus (cellular component) GO:0003677 - DNA binding (molecular function) GO:0003713 - transcription coactivator activity (molecular function)
InterPro domains	IPR003173 - Transcriptional coactivator p15 (PC4), C-terminal IPR009044 - ssDNA-binding transcriptional regulator IPR045125 - RNA polymerase II transcriptional coactivator Sub1/Tcp4-like

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022925285.1 RNA polymerase II transcriptional coactivator KIWI-like [Cucurbita moschata]

2.6e-04

100

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Query:  GISLSLDQWNVLRNHVEEIDKAVNEN
        GISLSLDQWNVLRNHVEEIDKAVNEN
Subjt:  GISLSLDQWNVLRNHVEEIDKAVNEN

XP_022925285.1 RNA polymerase II transcriptional coactivator KIWI-like [Cucurbita moschata]

5.5e-31

94.67

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Query:  MSARGKRKDDEDHASEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKG
        MSARGKRKDDEDH SEGDAPPKKTF+KDS+E DEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKG
Subjt:  MSARGKRKDDEDHASEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKG

XP_022966500.1 RNA polymerase II transcriptional coactivator KIWI-like isoform X1 [Cucurbita maxima]

8.5e-32

97.33

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Query:  MSARGKRKDDEDHASEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKG
        MSARGKRKDDEDHASEGDAPPKKTFKKDSEE DEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGK+MPGKKG
Subjt:  MSARGKRKDDEDHASEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKG

XP_022966500.1 RNA polymerase II transcriptional coactivator KIWI-like isoform X1 [Cucurbita maxima]

7.5e-04

96.15

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Query:  GISLSLDQWNVLRNHVEEIDKAVNEN
        G SLSLDQWNVLRNHVEEIDKAVNEN
Subjt:  GISLSLDQWNVLRNHVEEIDKAVNEN

XP_022966500.1 RNA polymerase II transcriptional coactivator KIWI-like isoform X1 [Cucurbita maxima]

1.9e-31

87.8

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Query:  MSARGKRKDDEDHASEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGCKKTIVG
        MSARGKRKDDEDH  EGDAPPKKTF+KDS+E DEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKG  K + G
Subjt:  MSARGKRKDDEDHASEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGCKKTIVG

XP_023518433.1 RNA polymerase II transcriptional coactivator KIWI-like [Cucurbita pepo subsp. pepo]

1.9e-31

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Query:  MSARGKRKDDEDHASEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKG
        MSARGKRKDDEDHASEGDAPPKKTFKKDS+E DEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGK+MPGKKG
Subjt:  MSARGKRKDDEDHASEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKG

XP_023518433.1 RNA polymerase II transcriptional coactivator KIWI-like [Cucurbita pepo subsp. pepo]

2.6e-04

100

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Query:  GISLSLDQWNVLRNHVEEIDKAVNEN
        GISLSLDQWNVLRNHVEEIDKAVNEN
Subjt:  GISLSLDQWNVLRNHVEEIDKAVNEN

XP_023518433.1 RNA polymerase II transcriptional coactivator KIWI-like [Cucurbita pepo subsp. pepo]

4.2e-31

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Query:  MSARGKRKDDEDHASEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKG
        MSARGKRKDDEDHASEGDAPPKKT KKDSEE DEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGK+MPGKKG
Subjt:  MSARGKRKDDEDHASEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKG

TrEMBL top hits

e value

%identity

Alignment

A0A6J1EHI0 RNA polymerase II transcriptional coactivator KIWI-like

2.0e-31

Show/hide

Query:  MSARGKRKDDEDHASEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKG
        MSARGKRKDDEDHASEGDAPPKKT KKDSEE DEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGK+MPGKKG
Subjt:  MSARGKRKDDEDHASEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKG

A0A6J1EHI0 RNA polymerase II transcriptional coactivator KIWI-like

1.2e-04

100

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Query:  GISLSLDQWNVLRNHVEEIDKAVNEN
        GISLSLDQWNVLRNHVEEIDKAVNEN
Subjt:  GISLSLDQWNVLRNHVEEIDKAVNEN

A0A6J1EHI0 RNA polymerase II transcriptional coactivator KIWI-like

1.3e-30

93.33

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Query:  MSARGKRKDDEDHASEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKG
        MSARGKRKDDEDH  EGDAPPKKTF+KDS+E DEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKG
Subjt:  MSARGKRKDDEDHASEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKG

A0A6J1EYI2 RNA polymerase II transcriptional coactivator KIWI-like isoform X1

2.8e-04

96.15

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Query:  GISLSLDQWNVLRNHVEEIDKAVNEN
        GISLSLDQWNVLRNHV+EIDKAVNEN
Subjt:  GISLSLDQWNVLRNHVEEIDKAVNEN

A0A6J1EYI2 RNA polymerase II transcriptional coactivator KIWI-like isoform X1

2.3e-30

93.33

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Query:  MSARGKRKDDEDHASEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKG
        MSARGKRKDD++HASEGDAPPKKT KKDS+E DEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKG
Subjt:  MSARGKRKDDEDHASEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKG

A0A6J1HRT2 RNA polymerase II transcriptional coactivator KIWI-like isoform X1

4.1e-32

97.33

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Query:  MSARGKRKDDEDHASEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKG
        MSARGKRKDDEDHASEGDAPPKKTFKKDSEE DEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGK+MPGKKG
Subjt:  MSARGKRKDDEDHASEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKG

A0A6J1HRT2 RNA polymerase II transcriptional coactivator KIWI-like isoform X1

3.6e-04

96.15

Show/hide

Query:  GISLSLDQWNVLRNHVEEIDKAVNEN
        G SLSLDQWNVLRNHVEEIDKAVNEN
Subjt:  GISLSLDQWNVLRNHVEEIDKAVNEN

A0A6J1HRT2 RNA polymerase II transcriptional coactivator KIWI-like isoform X1

9.1e-32

87.8

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Query:  MSARGKRKDDEDHASEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGCKKTIVG
        MSARGKRKDDEDH  EGDAPPKKTF+KDS+E DEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKG  K + G
Subjt:  MSARGKRKDDEDHASEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGCKKTIVG

SwissProt top hits

e value

%identity

Alignment

O65154 RNA polymerase II transcriptional coactivator KIWI

1.3e-19

61.63

Show/hide

Query:  MSARGKRKDDE----DHASEGDAPPKKTFK--KDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGCKKTI
        MS+RGKRKD++    D  SE  AP KK  K   DS+++D+IVVC ISKNRRV VRNW GKI +DIREFYVKDGK +PGKKG   ++
Subjt:  MSARGKRKDDE----DHASEGDAPPKKTFK--KDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGCKKTI

O65155 RNA polymerase II transcriptional coactivator KELP

1.4e-05

38.89

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Query:  KDDEDHASEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGCKKT
        K++ED    GD    K  K+  ++ D +++C +S  RRV ++ ++GK +V IRE+Y KDGK++P  KG   T
Subjt:  KDDEDHASEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGCKKT

Arabidopsis top hits

e value

%identity

Alignment

AT5G09240.1 ssDNA-binding transcriptional regulator

1.5e-10

48.05

Show/hide

Query:  MSARGKRKDDEDHA------SEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMP
        MS  GKRKD++  A      SE  APPKK   K ++E ++I +C + KNRRV VRN  G+I + IR+F+VKDG  +P
Subjt:  MSARGKRKDDEDHA------SEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMP

AT5G09240.1 ssDNA-binding transcriptional regulator

1.6e-04

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Query:  GISLSLDQWNVLRNHVEEIDKAVNE
        GISLSL+QWN LRNH E+IDKA++E
Subjt:  GISLSLDQWNVLRNHVEEIDKAVNE

AT5G09240.2 ssDNA-binding transcriptional regulator

1.5e-10

48.05

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Query:  MSARGKRKDDEDHA------SEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMP
        MS  GKRKD++  A      SE  APPKK   K ++E ++I +C + KNRRV VRN  G+I + IR+F+VKDG  +P
Subjt:  MSARGKRKDDEDHA------SEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMP

AT5G09240.3 ssDNA-binding transcriptional regulator

1.5e-10

48.05

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Query:  MSARGKRKDDEDHA------SEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMP
        MS  GKRKD++  A      SE  APPKK   K ++E ++I +C + KNRRV VRN  G+I + IR+F+VKDG  +P
Subjt:  MSARGKRKDDEDHA------SEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMP

AT5G09250.1 ssDNA-binding transcriptional regulator

9.4e-21

61.63

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Query:  MSARGKRKDDE----DHASEGDAPPKKTFK--KDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGCKKTI
        MS+RGKRKD++    D  SE  AP KK  K   DS+++D+IVVC ISKNRRV VRNW GKI +DIREFYVKDGK +PGKKG   ++
Subjt:  MSARGKRKDDE----DHASEGDAPPKKTFK--KDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGCKKTI

AT5G09250.2 ssDNA-binding transcriptional regulator

1.6e-20

65.43

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Query:  MSARGKRKDDE----DHASEGDAPPKKTFK--KDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKG
        MS+RGKRKD++    D  SE  AP KK  K   DS+++D+IVVC ISKNRRV VRNW GKI +DIREFYVKDGK +PGKKG
Subjt:  MSARGKRKDDE----DHASEGDAPPKKTFK--KDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKG

Sequences

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CDS sequence

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ATGTCTGCAAGAGGAAAGCGAAAGGACGACGAAGACCACGCATCCGAGGGAGATGCTCCTCCGAAGAAGACATTCAAGAAAGATTCAGAAGAAGCCGACGAAATCGTCGT
CTGCGAGATTTCCAAGAACCGAAGGGTTATGGTGAGGAACTGGCAAGGAAAAATTGTGGTGGATATTCGGGAGTTTTATGTCAAAGATGGAAAGCAAATGCCTGGAAAGA
AGGGTTGCAAGAAAACTATTGTGGGTCTCCCCATTGAAATGGAGATTGCATATCCTAAAGAAGGAATTTTTGTGGTTCAAACAGTTGTAAATCACTCATCAAGATCGTTG
GTTGGTAGAGTGAGGAATGTCCATGTTGTAGGCTTGAGGGTTCTAGCAAAAACCTCTAGACTGCGATTGCTTCGGGTTTTATTTTCTAGCTATATCCAGTGCACTATGGT
GGAAGAATTGGTGTACAAAGAAGTGGAAAAGGCAAGGAAGTTCTGCTCTAGTAGCAAGGAGCTCTTAGTTGAGGAGGTGATTTCGGAGGTGGAAGAGGAAAAGGATGAGT
TGGTTTTTCTCCTTTATGGGCTTTCGTCATCCCCTCATGACCAAGAGACATCGAAGGTGGTTGCCCGTCTTTCTATGATTTTTGATCTTCAGGGAGAAGAAAGTTTCGAG
TTTGGGTTCCTAATCTATCCAAGGGTTTCTCTTGTAGATTGCGACAAGAGGACGATCTTAACCACTTATTGTGCAGTTGCTAGTTTGTTTTTACCCTTTGAAGTTAATAC
TTCAGATCATTTGGGATTGCTATGTTTGTCTCGAGAGGACAGTGGGATTTTTGGAGGGGTTAAAGACATCTTTGGTGGAGGCATCTCGCTATCCTTGGATCAGTGGAACG
TTCTCCGAAATCATGTAGAAGAAATTGATAAGGCTGTTAATGAAAACCCGTGA

mRNA sequence

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Protein sequence

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MSARGKRKDDEDHASEGDAPPKKTFKKDSEEADEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGCKKTIVGLPIEMEIAYPKEGIFVVQTVVNHSSRSL
VGRVRNVHVVGLRVLAKTSRLRLLRVLFSSYIQCTMVEELVYKEVEKARKFCSSSKELLVEEVISEVEEEKDELVFLLYGLSSSPHDQETSKVVARLSMIFDLQGEESFE
FGFLIYPRVSLVDCDKRTILTTYCAVASLFLPFEVNTSDHLGLLCLSREDSGIFGGVKDIFGGGISLSLDQWNVLRNHVEEIDKAVNENP

Spg002294 (gene) of Sponge gourd (cylindrica) v1 genome