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Spg002306 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg002306
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111022007
Genome locationscaffold1:31269358..31270671
RNA-Seq ExpressionSpg002306
SyntenySpg002306
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA3480410.1 nucleolar protein 58-like [Gossypium australe]2.8e-0636.36Show/hide
Query:  GVRTLLSGDLKPEAAIWLYVIKNRIMPTTHDTTISRERVMLLYSMHKGLDLNPRQIIWTKIFSCGDKNVGSL-IKKLIANSKQKVTSP
        G  T+    LKP   +W + +K+ + P TH++TIS++R+ LL+S+  G   N  +II+ ++  C +KNV +L    LI    QKV+ P
Subjt:  GVRTLLSGDLKPEAAIWLYVIKNRIMPTTHDTTISRERVMLLYSMHKGLDLNPRQIIWTKIFSCGDKNVGSL-IKKLIANSKQKVTSP

PON41193.1 LOW QUALITY PROTEIN: hypothetical protein PanWU01x14_291710 [Parasponia andersonii]8.0e-0636.99Show/hide
Query:  IGVRTLLSGDLKPEAAIWLYVIKNRIMPTTHDTTISRERVMLLYSMHKGLDLNPRQIIWTKIFSCGDKNVGSL
        +G  T L   L     IW + +K+ ++PTTH  T+S++R +LLYS+  G  +N  +II+ +I +C  K +G+L
Subjt:  IGVRTLLSGDLKPEAAIWLYVIKNRIMPTTHDTTISRERVMLLYSMHKGLDLNPRQIIWTKIFSCGDKNVGSL

PON50458.1 hypothetical protein PanWU01x14_223230, partial [Parasponia andersonii]6.2e-0629.21Show/hide
Query:  GVRTLLSGDLKPEAAIWLYVIKNRIMPTTHDTTISRERVMLLYSMHKGLDLNPRQIIWTKIFSCGDKNVG-----SLIKKLIANSKQKVTSPEKKAQATP
        GV T L   L P A IW + +K+R++PTTH   +S+ERV+LLYSM  G  +N  ++I  +I +C  +  G     SLI ++  N++      E+K   T 
Subjt:  GVRTLLSGDLKPEAAIWLYVIKNRIMPTTHDTTISRERVMLLYSMHKGLDLNPRQIIWTKIFSCGDKNVG-----SLIKKLIANSKQKVTSPEKKAQATP

Query:  H------ATQASKSPEE----------ATVVEEDTTANTLQNLPDATANQQQPPAPQPQPENNLVALRRDLERMRNQY
               A  A + P E            V    TT+ TLQ L     +  Q    Q Q    ++ + + + + + Q+
Subjt:  H------ATQASKSPEE----------ATVVEEDTTANTLQNLPDATANQQQPPAPQPQPENNLVALRRDLERMRNQY

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]1.2e-0635.35Show/hide
Query:  GVRTLLSGDLKPEAAIWLYVIKNRIMPTTHDTTISRERVMLLYSMHKGLDLNPRQIIWTKIFSCGDKNVG-----SLIKKLIANSKQKVTSPEKKAQAT
        G  T L   L P A +W + +K+R++PTTH  T+S+E V LLYSM  G  +N  ++I  +I +C  +  G     SLI  +  N++      E+K   T
Subjt:  GVRTLLSGDLKPEAAIWLYVIKNRIMPTTHDTTISRERVMLLYSMHKGLDLNPRQIIWTKIFSCGDKNVG-----SLIKKLIANSKQKVTSPEKKAQAT

XP_038904385.1 uncharacterized protein LOC120090747 [Benincasa hispida]4.7e-0645.61Show/hide
Query:  GVRTLLSGDLKPEAAIWLYVIKNRIMPTTHDTTISRERVMLLYSMHKGLDLNPRQII
        G++TL S  L PEA +W+Y++K RI+PT+HD T+SR+RVM  Y +  G+ ++   +I
Subjt:  GVRTLLSGDLKPEAAIWLYVIKNRIMPTTHDTTISRERVMLLYSMHKGLDLNPRQII

TrEMBL top hitse value%identityAlignment
A0A2P5BNT0 Uncharacterized protein (Fragment)3.0e-0629.21Show/hide
Query:  GVRTLLSGDLKPEAAIWLYVIKNRIMPTTHDTTISRERVMLLYSMHKGLDLNPRQIIWTKIFSCGDKNVG-----SLIKKLIANSKQKVTSPEKKAQATP
        GV T L   L P A IW + +K+R++PTTH   +S+ERV+LLYSM  G  +N  ++I  +I +C  +  G     SLI ++  N++      E+K   T 
Subjt:  GVRTLLSGDLKPEAAIWLYVIKNRIMPTTHDTTISRERVMLLYSMHKGLDLNPRQIIWTKIFSCGDKNVG-----SLIKKLIANSKQKVTSPEKKAQATP

Query:  H------ATQASKSPEE----------ATVVEEDTTANTLQNLPDATANQQQPPAPQPQPENNLVALRRDLERMRNQY
               A  A + P E            V    TT+ TLQ L     +  Q    Q Q    ++ + + + + + Q+
Subjt:  H------ATQASKSPEE----------ATVVEEDTTANTLQNLPDATANQQQPPAPQPQPENNLVALRRDLERMRNQY

A0A2P5CEY2 Uncharacterized protein8.7e-0633.05Show/hide
Query:  GDLKPEAAIWLYVIKNRIMPTTHDTTISRERVMLLYSMHKGLDLNPRQIIWTKIFSCGDKNVG-----SLIKKLIANSKQKVTSPEKKAQATPHATQASK
        G L P A +W + +K+R++PTTH  T+S++R++LLYSM  G  +N  ++I ++I +C  +  G     SLI +L  N++      E+K     H T    
Subjt:  GDLKPEAAIWLYVIKNRIMPTTHDTTISRERVMLLYSMHKGLDLNPRQIIWTKIFSCGDKNVG-----SLIKKLIANSKQKVTSPEKKAQATPHATQASK

Query:  SPEEATVVEEDTTANTLQ
        +   A + +E  T  T Q
Subjt:  SPEEATVVEEDTTANTLQ

A0A2P5CPE8 Uncharacterized protein1.1e-0527.68Show/hide
Query:  GVRTLLSGDLKPEAAIWLYVIKNRIMPTTHDTTISRERVMLLYSMHKGLDLNPRQIIWTKIFSCGDKNVG-----SLIKKLIANSKQKVTSPEKK-----
        G  T L   L P A +W + +K+R++PTTH  T+S+ERV+LLYSM  G  +N  QII  +I +   +  G     SLI ++  N++      E+K     
Subjt:  GVRTLLSGDLKPEAAIWLYVIKNRIMPTTHDTTISRERVMLLYSMHKGLDLNPRQIIWTKIFSCGDKNVG-----SLIKKLIANSKQKVTSPEKK-----

Query:  ----------AQATPHATQASKSPEEATVVEEDTTANTLQNLPDATANQQQPPAPQPQPENNLVALRRDLERMRNQY
                  AQ  P       S          +T+ TLQ L        Q    Q Q    ++ + + + + + Q+
Subjt:  ----------AQATPHATQASKSPEEATVVEEDTTANTLQNLPDATANQQQPPAPQPQPENNLVALRRDLERMRNQY

A0A2P5DAQ2 Uncharacterized protein6.0e-0735.35Show/hide
Query:  GVRTLLSGDLKPEAAIWLYVIKNRIMPTTHDTTISRERVMLLYSMHKGLDLNPRQIIWTKIFSCGDKNVG-----SLIKKLIANSKQKVTSPEKKAQAT
        G  T L   L P A +W + +K+R++PTTH  T+S+E V LLYSM  G  +N  ++I  +I +C  +  G     SLI  +  N++      E+K   T
Subjt:  GVRTLLSGDLKPEAAIWLYVIKNRIMPTTHDTTISRERVMLLYSMHKGLDLNPRQIIWTKIFSCGDKNVG-----SLIKKLIANSKQKVTSPEKKAQAT

A0A5B6WFG9 Nucleolar protein 58-like1.3e-0636.36Show/hide
Query:  GVRTLLSGDLKPEAAIWLYVIKNRIMPTTHDTTISRERVMLLYSMHKGLDLNPRQIIWTKIFSCGDKNVGSL-IKKLIANSKQKVTSP
        G  T+    LKP   +W + +K+ + P TH++TIS++R+ LL+S+  G   N  +II+ ++  C +KNV +L    LI    QKV+ P
Subjt:  GVRTLLSGDLKPEAAIWLYVIKNRIMPTTHDTTISRERVMLLYSMHKGLDLNPRQIIWTKIFSCGDKNVGSL-IKKLIANSKQKVTSP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCGAGGACCTGTTCGTGCATGAGCAAGAGAAGGAGCAGCAGCCTCCAATTGATGAAGATGAGGTCCAAAAGATTTCTAGGGACCAAATGCCCAAAAGGGGCAGAGA
AGGAACTAACAGTGAGGCCGAAGGGAAAGCTAAGAAGAAGAAAAGAATAGACATTTCCCTGAGGAGGCCAAGAACTAGGAGAGCGACTTCTGTGCTTCCTCGAGCTAAGA
CACCATCACCACCACCACCTGCAATGAGAGAACCATTCGTTCCTCGGCCAAAGAAGACTCCAACAAAGCAGTCGATAGTGGAAGTTCGAGTGGAAGCCCATCAAGACACT
CAGACCCGTCTGGCCATTGTGAAGAAACTGGTTCTGATGTGTGAGAAGGCATTCTCCACTAAGACGGGACCTCTCCCAGCATTCATTGAAAATATTTTGCACAGGATCGG
AGTCAGGACTCTATTGTCTGGGGATTTAAAGCCAGAGGCAGCAATCTGGCTTTACGTGATTAAAAATAGGATCATGCCAACCACACATGACACCACCATATCTCGGGAGC
GTGTCATGTTGTTGTATAGCATGCACAAGGGGCTGGATCTAAATCCTAGACAGATTATATGGACAAAGATCTTCTCTTGTGGGGACAAGAACGTGGGAAGCTTGATCAAG
AAGCTCATAGCCAATTCCAAGCAAAAGGTGACTTCTCCAGAGAAGAAGGCTCAAGCAACCCCTCATGCAACTCAAGCATCAAAGTCTCCAGAAGAAGCCACTGTTGTAGA
AGAAGATACGACTGCAAACACATTGCAAAATCTACCAGATGCGACCGCAAATCAGCAACAACCTCCAGCTCCTCAGCCGCAACCTGAAAACAACTTGGTGGCTTTGAGGA
GAGACTTGGAACGTATGAGGAACCAGTATAGGGACTACCTGACCTATGCTAAAGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCGAGGACCTGTTCGTGCATGAGCAAGAGAAGGAGCAGCAGCCTCCAATTGATGAAGATGAGGTCCAAAAGATTTCTAGGGACCAAATGCCCAAAAGGGGCAGAGA
AGGAACTAACAGTGAGGCCGAAGGGAAAGCTAAGAAGAAGAAAAGAATAGACATTTCCCTGAGGAGGCCAAGAACTAGGAGAGCGACTTCTGTGCTTCCTCGAGCTAAGA
CACCATCACCACCACCACCTGCAATGAGAGAACCATTCGTTCCTCGGCCAAAGAAGACTCCAACAAAGCAGTCGATAGTGGAAGTTCGAGTGGAAGCCCATCAAGACACT
CAGACCCGTCTGGCCATTGTGAAGAAACTGGTTCTGATGTGTGAGAAGGCATTCTCCACTAAGACGGGACCTCTCCCAGCATTCATTGAAAATATTTTGCACAGGATCGG
AGTCAGGACTCTATTGTCTGGGGATTTAAAGCCAGAGGCAGCAATCTGGCTTTACGTGATTAAAAATAGGATCATGCCAACCACACATGACACCACCATATCTCGGGAGC
GTGTCATGTTGTTGTATAGCATGCACAAGGGGCTGGATCTAAATCCTAGACAGATTATATGGACAAAGATCTTCTCTTGTGGGGACAAGAACGTGGGAAGCTTGATCAAG
AAGCTCATAGCCAATTCCAAGCAAAAGGTGACTTCTCCAGAGAAGAAGGCTCAAGCAACCCCTCATGCAACTCAAGCATCAAAGTCTCCAGAAGAAGCCACTGTTGTAGA
AGAAGATACGACTGCAAACACATTGCAAAATCTACCAGATGCGACCGCAAATCAGCAACAACCTCCAGCTCCTCAGCCGCAACCTGAAAACAACTTGGTGGCTTTGAGGA
GAGACTTGGAACGTATGAGGAACCAGTATAGGGACTACCTGACCTATGCTAAAGCTTGA
Protein sequenceShow/hide protein sequence
MFEDLFVHEQEKEQQPPIDEDEVQKISRDQMPKRGREGTNSEAEGKAKKKKRIDISLRRPRTRRATSVLPRAKTPSPPPPAMREPFVPRPKKTPTKQSIVEVRVEAHQDT
QTRLAIVKKLVLMCEKAFSTKTGPLPAFIENILHRIGVRTLLSGDLKPEAAIWLYVIKNRIMPTTHDTTISRERVMLLYSMHKGLDLNPRQIIWTKIFSCGDKNVGSLIK
KLIANSKQKVTSPEKKAQATPHATQASKSPEEATVVEEDTTANTLQNLPDATANQQQPPAPQPQPENNLVALRRDLERMRNQYRDYLTYAKA