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Spg002335 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg002335
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionORF43m
Genome locationscaffold5:7207926..7208529
RNA-Seq ExpressionSpg002335
SyntenySpg002335
Gene Ontology termsGO:0006101 - citrate metabolic process (biological process)
GO:0006351 - transcription, DNA-templated (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
GO:0004108 - citrate (Si)-synthase activity (molecular function)
GO:0032549 - ribonucleoside binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ERM97427.1 hypothetical protein AMTR_s02909p00006680 [Amborella trichopoda]1.1e-3796.34Show/hide
Query:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRYPGVADRP
        MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDA  PFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLR+PGVADRP
Subjt:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRYPGVADRP

KAF4348549.1 hypothetical protein F8388_000228 [Cannabis sativa]1.0e-5694.87Show/hide
Query:  KRIEEASDSFMQAPLGSGGYSSVGRAPLLQLGRCDYGSSMDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQKEGKSMDRPHRLH
        KRIEEA DSFM APLGSGGYSSVGRAPLLQLGRCDYGSSMDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDA  PFNPLSEMRQKEGKSMDRPHRLH
Subjt:  KRIEEASDSFMQAPLGSGGYSSVGRAPLLQLGRCDYGSSMDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQKEGKSMDRPHRLH

Query:  PVGTTRSPQGRLRYPGV
        PVGTTRSPQGRLR+PG+
Subjt:  PVGTTRSPQGRLRYPGV

KAG9438705.1 hypothetical protein H6P81_021364 [Aristolochia fimbriata]9.1e-3762.33Show/hide
Query:  LGSGGYSSVGRAPLLQLGRCDYG------------------------SSMDRTWTV---------------VGVGGSLRVPSSGIPGEEDQVGPCEQLDA
        L  GGYSSVGRAPLLQLGRCDYG                           DR   +               VGVGGS RVPSSGIPGEEDQVGPCEQLDA
Subjt:  LGSGGYSSVGRAPLLQLGRCDYG------------------------SSMDRTWTV---------------VGVGGSLRVPSSGIPGEEDQVGPCEQLDA

Query:  RDPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRYPGVADRP
          PFNPLSEM QKEGK MDRPHRLHPVGTTRSPQGRLR+PGV DRP
Subjt:  RDPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRYPGVADRP

OVA05688.1 hypothetical protein BVC80_4285g1 [Macleaya cordata]7.6e-4482.91Show/hide
Query:  KRIEEASDSFMQAPLGSGGYSSVGRAPLLQLGRCDYGSSMDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQKEGKSMDRPHRLH
        KRIEEASDSFM APLGSGGYSSVGRAPLLQL              VVGVGGS RVPSSGIPGEEDQVGPCEQLDA  PFNPLSEMRQKEGKSMDRPHRLH
Subjt:  KRIEEASDSFMQAPLGSGGYSSVGRAPLLQLGRCDYGSSMDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQKEGKSMDRPHRLH

Query:  PVGTTRSPQGRLRYPGV
        PVGTTRSPQGRLR+PG+
Subjt:  PVGTTRSPQGRLRYPGV

QHE65624.1 ORF43m [Nitraria roborowskii]2.8e-3897.56Show/hide
Query:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRYPGVADRP
        MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDA  PFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRYPGVADRP
Subjt:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRYPGVADRP

TrEMBL top hitse value%identityAlignment
A0A200Q5G5 Uncharacterized protein ycf683.7e-4482.91Show/hide
Query:  KRIEEASDSFMQAPLGSGGYSSVGRAPLLQLGRCDYGSSMDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQKEGKSMDRPHRLH
        KRIEEASDSFM APLGSGGYSSVGRAPLLQL              VVGVGGS RVPSSGIPGEEDQVGPCEQLDA  PFNPLSEMRQKEGKSMDRPHRLH
Subjt:  KRIEEASDSFMQAPLGSGGYSSVGRAPLLQLGRCDYGSSMDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQKEGKSMDRPHRLH

Query:  PVGTTRSPQGRLRYPGV
        PVGTTRSPQGRLR+PG+
Subjt:  PVGTTRSPQGRLRYPGV

A0A6B9QF48 ORF43m1.4e-3897.56Show/hide
Query:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRYPGVADRP
        MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDA  PFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRYPGVADRP
Subjt:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRYPGVADRP

A0A6B9QFK3 ORF43m1.4e-3897.56Show/hide
Query:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRYPGVADRP
        MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDA  PFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRYPGVADRP
Subjt:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRYPGVADRP

A0A6B9QGL2 ORF43m1.4e-3897.56Show/hide
Query:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRYPGVADRP
        MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDA  PFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRYPGVADRP
Subjt:  MDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRYPGVADRP

A0A7J6DSE9 Uncharacterized protein ycf685.0e-5794.87Show/hide
Query:  KRIEEASDSFMQAPLGSGGYSSVGRAPLLQLGRCDYGSSMDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQKEGKSMDRPHRLH
        KRIEEA DSFM APLGSGGYSSVGRAPLLQLGRCDYGSSMDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDA  PFNPLSEMRQKEGKSMDRPHRLH
Subjt:  KRIEEASDSFMQAPLGSGGYSSVGRAPLLQLGRCDYGSSMDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQKEGKSMDRPHRLH

Query:  PVGTTRSPQGRLRYPGV
        PVGTTRSPQGRLR+PG+
Subjt:  PVGTTRSPQGRLRYPGV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTACTTCACGGGCGAGGTCTCTGGTTCAAGTCCAGGATGGCCCAGCTACGCCAAGAAAAAGAATAAAAGAATAGAAGAAGCATCTGACTCCTTCATGCAGGCCCC
ACTTGGCTCGGGGGGATATAGCTCAGTTGGTAGAGCTCCGCTCTTGCAATTGGGTCGTTGCGATTACGGATCTAGTATGGATCGTACATGGACGGTAGTTGGAGTCGGCG
GCTCTCTTAGGGTTCCCTCATCTGGGATCCCTGGGGAAGAGGATCAAGTTGGCCCTTGCGAACAGCTTGATGCACGAGATCCCTTCAACCCTTTGAGCGAAATGCGGCAA
AAGGAAGGAAAATCCATGGACCGACCCCATCGTCTCCACCCCGTAGGAACTACGAGATCACCCCAAGGACGCCTTCGGTATCCAGGGGTCGCGGACCGACCATAG
mRNA sequenceShow/hide mRNA sequence
ATGATTTACTTCACGGGCGAGGTCTCTGGTTCAAGTCCAGGATGGCCCAGCTACGCCAAGAAAAAGAATAAAAGAATAGAAGAAGCATCTGACTCCTTCATGCAGGCCCC
ACTTGGCTCGGGGGGATATAGCTCAGTTGGTAGAGCTCCGCTCTTGCAATTGGGTCGTTGCGATTACGGATCTAGTATGGATCGTACATGGACGGTAGTTGGAGTCGGCG
GCTCTCTTAGGGTTCCCTCATCTGGGATCCCTGGGGAAGAGGATCAAGTTGGCCCTTGCGAACAGCTTGATGCACGAGATCCCTTCAACCCTTTGAGCGAAATGCGGCAA
AAGGAAGGAAAATCCATGGACCGACCCCATCGTCTCCACCCCGTAGGAACTACGAGATCACCCCAAGGACGCCTTCGGTATCCAGGGGTCGCGGACCGACCATAG
Protein sequenceShow/hide protein sequence
MIYFTGEVSGSSPGWPSYAKKKNKRIEEASDSFMQAPLGSGGYSSVGRAPLLQLGRCDYGSSMDRTWTVVGVGGSLRVPSSGIPGEEDQVGPCEQLDARDPFNPLSEMRQ
KEGKSMDRPHRLHPVGTTRSPQGRLRYPGVADRP