; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg002339 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg002339
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1
Genome locationscaffold5:7475545..7481373
RNA-Seq ExpressionSpg002339
SyntenySpg002339
Gene Ontology termsGO:0006325 - chromatin organization (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR014012 - Helicase/SANT-associated domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043726.1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 [Cucumis melo var. makuwa]1.1e-9982.47Show/hide
Query:  MASKGPRSKLDHETRAKRQKALEAPREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALRASKGMIDQATREERKLK-----------------
        M SKGPRSKLDHE+RAKRQKALEA REPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAK+VALRASKGM+DQATREERKLK                 
Subjt:  MASKGPRSKLDHETRAKRQKALEAPREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALRASKGMIDQATREERKLK-----------------

Query:  ----------VLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVETYKPLQVNSSHEPHNVHVQEMDESKAVEPTELNVEHESDSVDLDEEFDI
                  VLYKHQ+ELDEKKKKALDKHLEFLLGQTERYSTMLAENLVETYKP QVNS++EPHN HVQE+DESKAVEPTELNVEHESDSV+ DEEFD+
Subjt:  ----------VLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVETYKPLQVNSSHEPHNVHVQEMDESKAVEPTELNVEHESDSVDLDEEFDI

Query:  RSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEELLKRYKAEK
         SEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEELLKRY  EK
Subjt:  RSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEELLKRYKAEK

KAG6596234.1 Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1, partial [Cucurbita argyrosperma subsp. sororia]2.2e-10074.66Show/hide
Query:  MASKGPRSKLDHETRAKRQKALEAPREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALRASKGMIDQATREERKLK-----------------
        MASKGPR KLDHETRAKRQK  EAPREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALRASKGMIDQATREERKLK                 
Subjt:  MASKGPRSKLDHETRAKRQKALEAPREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALRASKGMIDQATREERKLK-----------------

Query:  ----------VLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVETYKPLQVNSSHEPHNVHVQEMDESKAVEPTELNVEHESDSVDLDEEFDI
                  VLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVETYKP QV+S+HEPHNVH+QEMDE+KAVE TELNVEHE+DSVD DEEFD+
Subjt:  ----------VLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVETYKPLQVNSSHEPHNVHVQEMDESKAVEPTELNVEHESDSVDLDEEFDI

Query:  RSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEELLKRYKAEKGMVLFGTIDSKDFPSWDLGG-------ENLKKGSISLVSDK
        RS+DESEDNEQTIDEDEALIT+EERQEELEALQNEVDLPLEELLKRY  EK        D +  P    GG       EN +KG+    S K
Subjt:  RSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEELLKRYKAEKGMVLFGTIDSKDFPSWDLGG-------ENLKKGSISLVSDK

XP_022940291.1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 [Cucurbita moschata]6.3e-10082.87Show/hide
Query:  MASKGPRSKLDHETRAKRQKALEAPREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALRASKGMIDQATREERKLK-----------------
        MASKGPR KLDHETRAKRQK  EAPREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALRASKGMIDQATREERKLK                 
Subjt:  MASKGPRSKLDHETRAKRQKALEAPREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALRASKGMIDQATREERKLK-----------------

Query:  ----------VLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVETYKPLQVNSSHEPHNVHVQEMDESKAVEPTELNVEHESDSVDLDEEFDI
                  VLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVETYKP QV+S+HEPHNVH+QEMDE+KAVE TELNVEHE+DSVD DEEFD+
Subjt:  ----------VLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVETYKPLQVNSSHEPHNVHVQEMDESKAVEPTELNVEHESDSVDLDEEFDI

Query:  RSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEELLKRYKAEK
        RS+DESEDNEQTIDEDEALIT+EERQEELEALQNEVDLPLEELLKRY  EK
Subjt:  RSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEELLKRYKAEK

XP_023539725.1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 [Cucurbita pepo subsp. pepo]6.3e-10082.87Show/hide
Query:  MASKGPRSKLDHETRAKRQKALEAPREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALRASKGMIDQATREERKLK-----------------
        MASKGPR KLDHETRAKRQK  EAPREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALRASKGMIDQATREERKLK                 
Subjt:  MASKGPRSKLDHETRAKRQKALEAPREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALRASKGMIDQATREERKLK-----------------

Query:  ----------VLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVETYKPLQVNSSHEPHNVHVQEMDESKAVEPTELNVEHESDSVDLDEEFDI
                  VLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVETYKP QV+S+HEPHNVH+QEMDE+KAVE TELNVEHE+DSVD DEEFD+
Subjt:  ----------VLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVETYKPLQVNSSHEPHNVHVQEMDESKAVEPTELNVEHESDSVDLDEEFDI

Query:  RSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEELLKRYKAEK
        RS+DESEDNEQTIDEDEALIT+EERQEELEALQNEVDLPLEELLKRY  EK
Subjt:  RSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEELLKRYKAEK

XP_038904045.1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 isoform X1 [Benincasa hispida]3.0e-10284.46Show/hide
Query:  MASKGPRSKLDHETRAKRQKALEAPREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALRASKGMIDQATREERKLK-----------------
        MASKGPRSKLDHETRAKRQKALEA REPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAK+VALRASKGMIDQATREERKLK                 
Subjt:  MASKGPRSKLDHETRAKRQKALEAPREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALRASKGMIDQATREERKLK-----------------

Query:  ----------VLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVETYKPLQVNSSHEPHNVHVQEMDESKAVEPTELNVEHESDSVDLDEEFDI
                  VLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVETYKP QVNS+HEPHNVH QE+DES+AVEPTELNVEHESDSVD DEEFD+
Subjt:  ----------VLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVETYKPLQVNSSHEPHNVHVQEMDESKAVEPTELNVEHESDSVDLDEEFDI

Query:  RSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEELLKRYKAEK
        RSEDESEDNEQTIDEDEALIT+EERQEELEALQNEVDLPLEELLKRY+ EK
Subjt:  RSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEELLKRYKAEK

TrEMBL top hitse value%identityAlignment
A0A0A0LBB6 Uncharacterized protein7.3e-10266.67Show/hide
Query:  TTAVVAGGDDKSGAAKRGIIWDPLESSLIRIWGSRS------SDLC--YADSRLQKTLHFPSKTTGSDS----------EVISEHPAFYQYRKAMASKGP
        TT V AGG D +G A+RG     L        GSRS        LC     + + + L    +  G +           ++ S+H       KAM SKGP
Subjt:  TTAVVAGGDDKSGAAKRGIIWDPLESSLIRIWGSRS------SDLC--YADSRLQKTLHFPSKTTGSDS----------EVISEHPAFYQYRKAMASKGP

Query:  RSKLDHETRAKRQKALEAPREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALRASKGMIDQATREERKLK-----------------------
        RSKLDHE+RAKRQKALEA +EPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAK+VALRASKGM+DQATREERKLK                       
Subjt:  RSKLDHETRAKRQKALEAPREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALRASKGMIDQATREERKLK-----------------------

Query:  ----VLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVETYKPLQVNSSHEPHNVHVQEMDESKAVEPTELNVEHESDSVDLDEEFDIRSEDES
            VLYKH+ ELDEKKKKALDKHLEFLLGQTERYSTMLAENLVETYKP QVNS++EPHN HVQE+DESKAVEPTELNVEHESDSVD DEEFD+ SEDES
Subjt:  ----VLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVETYKPLQVNSSHEPHNVHVQEMDESKAVEPTELNVEHESDSVDLDEEFDIRSEDES

Query:  EDNEQTIDEDEALITKEERQEELEALQNEVDLPLEELLKRYKAEK
        EDNEQTIDEDEALITKEERQEELEALQNEVDLPLEELLKRY  EK
Subjt:  EDNEQTIDEDEALITKEERQEELEALQNEVDLPLEELLKRYKAEK

A0A1S4DUM1 LOW QUALITY PROTEIN: protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 15.2e-10082.47Show/hide
Query:  MASKGPRSKLDHETRAKRQKALEAPREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALRASKGMIDQATREERKLK-----------------
        M SKGPRSKLDHE+RAKRQKALEA REPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAK+VALRASKGM+DQATREERKLK                 
Subjt:  MASKGPRSKLDHETRAKRQKALEAPREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALRASKGMIDQATREERKLK-----------------

Query:  ----------VLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVETYKPLQVNSSHEPHNVHVQEMDESKAVEPTELNVEHESDSVDLDEEFDI
                  VLYKHQ+ELDEKKKKALDKHLEFLLGQTERYSTMLAENLVETYKP QVNS++EPHN HVQE+DESKAVEPTELNVEHESDSV+ DEEFD+
Subjt:  ----------VLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVETYKPLQVNSSHEPHNVHVQEMDESKAVEPTELNVEHESDSVDLDEEFDI

Query:  RSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEELLKRYKAEK
         SEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEELLKRY  EK
Subjt:  RSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEELLKRYKAEK

A0A5A7TNS3 Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 15.2e-10082.47Show/hide
Query:  MASKGPRSKLDHETRAKRQKALEAPREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALRASKGMIDQATREERKLK-----------------
        M SKGPRSKLDHE+RAKRQKALEA REPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAK+VALRASKGM+DQATREERKLK                 
Subjt:  MASKGPRSKLDHETRAKRQKALEAPREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALRASKGMIDQATREERKLK-----------------

Query:  ----------VLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVETYKPLQVNSSHEPHNVHVQEMDESKAVEPTELNVEHESDSVDLDEEFDI
                  VLYKHQ+ELDEKKKKALDKHLEFLLGQTERYSTMLAENLVETYKP QVNS++EPHN HVQE+DESKAVEPTELNVEHESDSV+ DEEFD+
Subjt:  ----------VLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVETYKPLQVNSSHEPHNVHVQEMDESKAVEPTELNVEHESDSVDLDEEFDI

Query:  RSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEELLKRYKAEK
         SEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEELLKRY  EK
Subjt:  RSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEELLKRYKAEK

A0A6J1FNW1 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 13.1e-10082.87Show/hide
Query:  MASKGPRSKLDHETRAKRQKALEAPREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALRASKGMIDQATREERKLK-----------------
        MASKGPR KLDHETRAKRQK  EAPREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALRASKGMIDQATREERKLK                 
Subjt:  MASKGPRSKLDHETRAKRQKALEAPREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALRASKGMIDQATREERKLK-----------------

Query:  ----------VLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVETYKPLQVNSSHEPHNVHVQEMDESKAVEPTELNVEHESDSVDLDEEFDI
                  VLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVETYKP QV+S+HEPHNVH+QEMDE+KAVE TELNVEHE+DSVD DEEFD+
Subjt:  ----------VLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVETYKPLQVNSSHEPHNVHVQEMDESKAVEPTELNVEHESDSVDLDEEFDI

Query:  RSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEELLKRYKAEK
        RS+DESEDNEQTIDEDEALIT+EERQEELEALQNEVDLPLEELLKRY  EK
Subjt:  RSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEELLKRYKAEK

A0A6J1I6A5 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 11.5e-9982.47Show/hide
Query:  MASKGPRSKLDHETRAKRQKALEAPREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALRASKGMIDQATREERKLK-----------------
        MASKGPR KLDHETRAKRQK  EAPREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALRASKGMIDQATREERKLK                 
Subjt:  MASKGPRSKLDHETRAKRQKALEAPREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALRASKGMIDQATREERKLK-----------------

Query:  ----------VLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVETYKPLQVNSSHEPHNVHVQEMDESKAVEPTELNVEHESDSVDLDEEFDI
                  VLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVETYKP  V+S+HEPHNVH+QEMDE+KAVE TELNVEHE+DSVD DEEFD+
Subjt:  ----------VLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVETYKPLQVNSSHEPHNVHVQEMDESKAVEPTELNVEHESDSVDLDEEFDI

Query:  RSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEELLKRYKAEK
        RS+DESEDNEQTIDEDEALIT+EERQEELEALQNEVDLPLEELLKRY  EK
Subjt:  RSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEELLKRYKAEK

SwissProt top hitse value%identityAlignment
Q6ZRS2 Helicase SRCAP2.4e-1734.93Show/hide
Query:  KALEAPREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALRASKGMIDQATREER-------KLK--------------------VLYKHQMEL
        K L    EP RPK HWD++ EEM WLS DF  ER+WK   A+KV     +   +Q  +EER       KL+                    V +K Q  L
Subjt:  KALEAPREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALRASKGMIDQATREER-------KLK--------------------VLYKHQMEL

Query:  DEKKKKALDKHLEFLLGQTERYSTMLAENLVETYKPLQVNSSHEPHNVHVQEMDESKAVEPTELNVEHESDSVDLDEEFDIR-SEDESEDNEQTI--DED
        +EK+KKALD HL+F++GQTE+YS +L+++L +      + SS    +  +     + +  P    ++        DE+ D +  EDE ED+E+TI  +E 
Subjt:  DEKKKKALDKHLEFLLGQTERYSTMLAENLVETYKPLQVNSSHEPHNVHVQEMDESKAVEPTELNVEHESDSVDLDEEFDIR-SEDESEDNEQTI--DED

Query:  EALITKEERQEELEALQNEVDLPLEELLK
        +     E ++ E+E L+ E +LPLEELL+
Subjt:  EALITKEERQEELEALQNEVDLPLEELLK

Q7X9V2 Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 16.0e-6959.57Show/hide
Query:  MASKGPRSKLDHETRAKRQKALEAPREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALRASKGMIDQATREERKLK-----------------
        MASK  +SK D+E+RAKRQK LEAP+EP RPKTHWDHVLEEM WLSKDFESERKWKLAQAKKVALRASKGM+DQA+REERKLK                 
Subjt:  MASKGPRSKLDHETRAKRQKALEAPREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALRASKGMIDQATREERKLK-----------------

Query:  ----------VLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVETYKPLQVNSSHEPHNVHVQEMDESKAVE-PTELNVEH--ESDSVDLDEE
                  VLYKHQ+  +EKKKKA+DK LEFLLGQTERYSTMLAENLVE YK  Q N+  +P      + DE +A + P E+N     ES S +LDE+
Subjt:  ----------VLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVETYKPLQVNSSHEPHNVHVQEMDESKAVE-PTELNVEH--ESDSVDLDEE

Query:  FDIRSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEELLKRYKAEKGMVLFGTIDSKDFPSWDLGGENL
        +D++SEDE+ED+E TI+EDE   TK ERQEELEALQNEVDLP+EELL+RY +       G +  +  P  D   +NL
Subjt:  FDIRSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEELLKRYKAEKGMVLFGTIDSKDFPSWDLGGENL

Q8CHI8 E1A-binding protein p4002.9e-0730.39Show/hide
Query:  REPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALRASKGMIDQATREERKLKVLYKHQMELDEKKKKALDKHLEFLLGQTER---YSTMLAENL
        +E  RPK+HWD++LEEM W++ DF  ER+WKLA AKK+    ++        EE+KL+         +E+ KK     L  +   T R   Y     E +
Subjt:  REPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALRASKGMIDQATREERKLKVLYKHQMELDEKKKKALDKHLEFLLGQTER---YSTMLAENL

Query:  VETYKPLQVNSSHEP--HNVHVQEMDESKAVEPTELNVEHESD---SVDLDEEFDIRSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEELL
        VE    +++    +   +   V    +   ++  + + EH  D   S    +     ++DE ED E+TI+E+EA     +   EL  L  E +LPL +L+
Subjt:  VETYKPLQVNSSHEP--HNVHVQEMDESKAVEPTELNVEHESD---SVDLDEEFDIRSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEELL

Query:  KRYK
        K Y+
Subjt:  KRYK

Q9NDJ2 Helicase domino1.4e-1731.47Show/hide
Query:  QKALEAPREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALRASKGMIDQATREERKLK---------------------------VLYKHQME
        ++ L   +EP+RPK HWD++LEEMVWL+ DF  ERKWK   AKK A    K   D+AT  +R  K                           V YKHQ +
Subjt:  QKALEAPREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALRASKGMIDQATREERKLK---------------------------VLYKHQME

Query:  LDEKKKKALDKHLEFLLGQTERYSTMLAENLVETYKPL-QVNSSHEPHNVHVQEMD---ESKAVEPTELNVEHESDSVDLDEE-----------FD----
        ++EK+K+ALD+HL F++ QTE++S  L E + ++      +NSS         + D   ES + +  E   + E D+ D+ EE           FD    
Subjt:  LDEKKKKALDKHLEFLLGQTERYSTMLAENLVETYKPL-QVNSSHEPHNVHVQEMD---ESKAVEPTELNVEHESDSVDLDEE-----------FD----

Query:  ---------------------IRSE--DESEDNE----QTIDEDEALITKEERQE-------ELEALQNEVDLPLEELLKRYKAEK
                             I++E  D+S+D+E    +  D+DE  I+K+E  E       E++ L+ + DL +E+LL +YK+E+
Subjt:  ---------------------IRSE--DESEDNE----QTIDEDEALITKEERQE-------ELEALQNEVDLPLEELLKRYKAEK

Q9NEL2 Helicase ssl-12.0e-0829.36Show/hide
Query:  EPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALRASKGMID----------QATREERKL----------------KVLYKHQME-LDEKKKKA
        EP R KTHWD++LEE+ W++ DF +E   K   AK +A   +K   D          +  +E+RK+                KV+     E L+ + +KA
Subjt:  EPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALRASKGMID----------QATREERKL----------------KVLYKHQME-LDEKKKKA

Query:  LDKHLEFLLGQTERYSTMLAENLVETYKPLQVNSSHEPHNVHVQEMDESKAVEPTELNVEHESDSVDLDEEFDIRSEDESEDNEQTIDEDEALITKEERQ
         +KHL F++GQ +  S ++ E LV + K   +                              SD  D DEEF     D   D+EQTI   E    KE+ +
Subjt:  LDKHLEFLLGQTERYSTMLAENLVETYKPLQVNSSHEPHNVHVQEMDESKAVEPTELNVEHESDSVDLDEEFDIRSEDESEDNEQTIDEDEALITKEERQ

Query:  EELEALQNEVDLPLEELL
        +E++ALQNE  + +++ L
Subjt:  EELEALQNEVDLPLEELL

Arabidopsis top hitse value%identityAlignment
AT3G12810.1 SNF2 domain-containing protein / helicase domain-containing protein4.3e-7059.57Show/hide
Query:  MASKGPRSKLDHETRAKRQKALEAPREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALRASKGMIDQATREERKLK-----------------
        MASK  +SK D+E+RAKRQK LEAP+EP RPKTHWDHVLEEM WLSKDFESERKWKLAQAKKVALRASKGM+DQA+REERKLK                 
Subjt:  MASKGPRSKLDHETRAKRQKALEAPREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALRASKGMIDQATREERKLK-----------------

Query:  ----------VLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVETYKPLQVNSSHEPHNVHVQEMDESKAVE-PTELNVEH--ESDSVDLDEE
                  VLYKHQ+  +EKKKKA+DK LEFLLGQTERYSTMLAENLVE YK  Q N+  +P      + DE +A + P E+N     ES S +LDE+
Subjt:  ----------VLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVETYKPLQVNSSHEPHNVHVQEMDESKAVE-PTELNVEH--ESDSVDLDEE

Query:  FDIRSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEELLKRYKAEKGMVLFGTIDSKDFPSWDLGGENL
        +D++SEDE+ED+E TI+EDE   TK ERQEELEALQNEVDLP+EELL+RY +       G +  +  P  D   +NL
Subjt:  FDIRSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEELLKRYKAEKGMVLFGTIDSKDFPSWDLGGENL

AT3G24870.1 Helicase/SANT-associated, DNA binding protein9.1e-0431.25Show/hide
Query:  SKTTGSDSEVISEHPAFYQYRKAMASKGPRSKLDHETRAKRQKALE-----APREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALRAS
        S  +G+D E +   P+          +    +     +AK+++  E     AP E  R K+ WD VLEEM WL+ DF  ER WK+  A ++  R +
Subjt:  SKTTGSDSEVISEHPAFYQYRKAMASKGPRSKLDHETRAKRQKALE-----APREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALRAS

AT3G24870.2 Helicase/SANT-associated, DNA binding protein9.1e-0431.25Show/hide
Query:  SKTTGSDSEVISEHPAFYQYRKAMASKGPRSKLDHETRAKRQKALE-----APREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALRAS
        S  +G+D E +   P+          +    +     +AK+++  E     AP E  R K+ WD VLEEM WL+ DF  ER WK+  A ++  R +
Subjt:  SKTTGSDSEVISEHPAFYQYRKAMASKGPRSKLDHETRAKRQKALE-----APREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALRAS

AT3G24880.1 Helicase/SANT-associated, DNA binding protein9.1e-0431.25Show/hide
Query:  SKTTGSDSEVISEHPAFYQYRKAMASKGPRSKLDHETRAKRQKALE-----APREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALRAS
        S  +G+D E +   P+          +    +     +AK+++  E     AP E  R K+ WD VLEEM WL+ DF  ER WK+  A ++  R +
Subjt:  SKTTGSDSEVISEHPAFYQYRKAMASKGPRSKLDHETRAKRQKALE-----APREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALRAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAGGAAGTCGAGCCTATCAAATGAGCAACAAACTTTGTATCTGAATACATGGAGGGCAAAACAAAGTGAAATGAAGGCCAAGAAAGTTCGAGGTGCTTGTAGATG
GAGCTTGGTTAATTTTGGAATTGGACATATCACCGGTTTGGGACGGAGAACCACCGCCGTCGTCGCCGGCGGGGACGATAAAAGTGGAGCCGCCAAACGAGGAATAATTT
GGGACCCTCTCGAGAGCTCACTCATTCGGATCTGGGGCTCACGTTCGTCGGATCTATGTTACGCTGATTCTCGACTGCAAAAAACCCTACACTTCCCGTCGAAAACCACG
GGTTCAGACTCGGAAGTGATATCAGAGCATCCAGCATTTTATCAATACAGAAAAGCCATGGCATCTAAAGGTCCCAGGTCTAAACTTGATCACGAGACAAGAGCCAAGCG
TCAAAAGGCACTTGAAGCTCCAAGAGAACCTAATCGTCCTAAAACACACTGGGATCATGTTTTAGAAGAGATGGTTTGGCTTTCAAAGGACTTTGAGTCTGAGCGGAAAT
GGAAATTAGCTCAGGCGAAAAAGGTTGCTCTAAGAGCTAGCAAAGGCATGATAGATCAAGCTACAAGGGAAGAAAGGAAGTTGAAGGTGCTTTACAAGCATCAGATGGAG
CTTGACGAGAAAAAGAAGAAAGCACTTGACAAACACCTCGAGTTTCTTTTAGGACAAACAGAAAGGTACTCAACAATGCTGGCAGAAAATCTTGTGGAAACTTATAAACC
ATTGCAGGTGAATTCTTCACATGAGCCACACAATGTTCACGTCCAAGAAATGGATGAAAGCAAAGCTGTTGAGCCCACAGAGTTAAATGTTGAACACGAGTCAGATTCTG
TGGACCTTGATGAAGAATTTGATATAAGATCAGAAGATGAATCAGAAGATAATGAGCAGACTATAGATGAAGATGAGGCTCTGATAACTAAAGAAGAGAGGCAAGAAGAA
TTGGAAGCTTTGCAAAATGAAGTGGATCTTCCTCTTGAAGAGCTTCTTAAAAGATATAAAGCAGAGAAAGGAATGGTTCTTTTTGGAACCATTGATTCAAAGGATTTCCC
TTCTTGGGATCTTGGAGGTGAGAATCTGAAGAAGGGAAGTATCTCACTTGTTTCTGATAAATGGTTTGATTTGGAGGTTTCTGTCGAACCTATGGTCCTTCAGCCTAAAA
TTGTTGCAAGGGCTTCTCAAGGACTTTTGGTTTTGGGTTGTTGCCAATCTGCAAGTGTTGGACGCCTGTGGGAGACCATTTCTGCTTTGAGGAGTGTGATAGAAGAGAGA
TCTAAGCGTGTGCTTGAGAATGAAGAGGATTCAAGTTTTGGAAGAATTCTTGGCAGGAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACAGGAAGTCGAGCCTATCAAATGAGCAACAAACTTTGTATCTGAATACATGGAGGGCAAAACAAAGTGAAATGAAGGCCAAGAAAGTTCGAGGTGCTTGTAGATG
GAGCTTGGTTAATTTTGGAATTGGACATATCACCGGTTTGGGACGGAGAACCACCGCCGTCGTCGCCGGCGGGGACGATAAAAGTGGAGCCGCCAAACGAGGAATAATTT
GGGACCCTCTCGAGAGCTCACTCATTCGGATCTGGGGCTCACGTTCGTCGGATCTATGTTACGCTGATTCTCGACTGCAAAAAACCCTACACTTCCCGTCGAAAACCACG
GGTTCAGACTCGGAAGTGATATCAGAGCATCCAGCATTTTATCAATACAGAAAAGCCATGGCATCTAAAGGTCCCAGGTCTAAACTTGATCACGAGACAAGAGCCAAGCG
TCAAAAGGCACTTGAAGCTCCAAGAGAACCTAATCGTCCTAAAACACACTGGGATCATGTTTTAGAAGAGATGGTTTGGCTTTCAAAGGACTTTGAGTCTGAGCGGAAAT
GGAAATTAGCTCAGGCGAAAAAGGTTGCTCTAAGAGCTAGCAAAGGCATGATAGATCAAGCTACAAGGGAAGAAAGGAAGTTGAAGGTGCTTTACAAGCATCAGATGGAG
CTTGACGAGAAAAAGAAGAAAGCACTTGACAAACACCTCGAGTTTCTTTTAGGACAAACAGAAAGGTACTCAACAATGCTGGCAGAAAATCTTGTGGAAACTTATAAACC
ATTGCAGGTGAATTCTTCACATGAGCCACACAATGTTCACGTCCAAGAAATGGATGAAAGCAAAGCTGTTGAGCCCACAGAGTTAAATGTTGAACACGAGTCAGATTCTG
TGGACCTTGATGAAGAATTTGATATAAGATCAGAAGATGAATCAGAAGATAATGAGCAGACTATAGATGAAGATGAGGCTCTGATAACTAAAGAAGAGAGGCAAGAAGAA
TTGGAAGCTTTGCAAAATGAAGTGGATCTTCCTCTTGAAGAGCTTCTTAAAAGATATAAAGCAGAGAAAGGAATGGTTCTTTTTGGAACCATTGATTCAAAGGATTTCCC
TTCTTGGGATCTTGGAGGTGAGAATCTGAAGAAGGGAAGTATCTCACTTGTTTCTGATAAATGGTTTGATTTGGAGGTTTCTGTCGAACCTATGGTCCTTCAGCCTAAAA
TTGTTGCAAGGGCTTCTCAAGGACTTTTGGTTTTGGGTTGTTGCCAATCTGCAAGTGTTGGACGCCTGTGGGAGACCATTTCTGCTTTGAGGAGTGTGATAGAAGAGAGA
TCTAAGCGTGTGCTTGAGAATGAAGAGGATTCAAGTTTTGGAAGAATTCTTGGCAGGAGGTGA
Protein sequenceShow/hide protein sequence
MNRKSSLSNEQQTLYLNTWRAKQSEMKAKKVRGACRWSLVNFGIGHITGLGRRTTAVVAGGDDKSGAAKRGIIWDPLESSLIRIWGSRSSDLCYADSRLQKTLHFPSKTT
GSDSEVISEHPAFYQYRKAMASKGPRSKLDHETRAKRQKALEAPREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALRASKGMIDQATREERKLKVLYKHQME
LDEKKKKALDKHLEFLLGQTERYSTMLAENLVETYKPLQVNSSHEPHNVHVQEMDESKAVEPTELNVEHESDSVDLDEEFDIRSEDESEDNEQTIDEDEALITKEERQEE
LEALQNEVDLPLEELLKRYKAEKGMVLFGTIDSKDFPSWDLGGENLKKGSISLVSDKWFDLEVSVEPMVLQPKIVARASQGLLVLGCCQSASVGRLWETISALRSVIEER
SKRVLENEEDSSFGRILGRR