; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg002354 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg002354
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibosome-binding factor PSRP1
Genome locationscaffold6:276859..284005
RNA-Seq ExpressionSpg002354
SyntenySpg002354
Gene Ontology termsGO:0006417 - regulation of translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0043021 - ribonucleoprotein complex binding (molecular function)
InterPro domainsIPR003489 - Ribosome hibernation promoting factor/RaiA
IPR032528 - Sigma 54 modulation/S30EA ribosomal protein, C-terminal
IPR036567 - Ribosome hibernation promotion factor-like
IPR038416 - Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014676.1 Ribosome-binding factor PSRP1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-12866.83Show/hide
Query:  MAAFTSSIQTNLFSCHSLAAAASSSS--------STLPASFSL----HFSALKIHALSSHSSAFFNSCK-CFRTIDIAPRNRHATNSFTIRMSWDGPLSS
        MAA TSS+QTNL S HSL  ++SSSS        ST P SFSL    + + LK HALSSH+SAFFNSC  CFRTI +APR RHAT SF+IRMSWDGPLSS
Subjt:  MAAFTSSIQTNLFSCHSLAAAASSSS--------STLPASFSL----HFSALKIHALSSHSSAFFNSCK-CFRTIDIAPRNRHATNSFTIRMSWDGPLSS

Query:  VKLIVQGKNLEEEEDLDHILWDYEFASSVWGLFHNAFGLLARCFKDYKEMIQEFLLHLPFRNKGRFLWLAELTEAVKKHVEEKVGKAVQKHSHLVREVDV
        VKLIVQGKNL                                                            ELTEAVKKHVEEKVGKAVQKHSHLVREVDV
Subjt:  VKLIVQGKNLEEEEDLDHILWDYEFASSVWGLFHNAFGLLARCFKDYKEMIQEFLLHLPFRNKGRFLWLAELTEAVKKHVEEKVGKAVQKHSHLVREVDV

Query:  RLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVREPAPIVVEDEEEEVSQEDGGEVI
        RLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSI+QRKLRKIKEKDSDHGRHMKGFDR K+R+PAPIVVEDEEEEVSQEDGGE I
Subjt:  RLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVREPAPIVVEDEEEEVSQEDGGEVI

Query:  DEMRHASEAFTDPLLLMLLLWSIQMYLIIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKEGGYGLIIPKENGGAEKLEPVTVEPS
        DE                          IVRTKYFDMPPLT+EEAIEQLKNIDHDFYGFRNEETGEINILYKRK+GGYGLIIPKE+G AEK+E VTVE +
Subjt:  DEMRHASEAFTDPLLLMLLLWSIQMYLIIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKEGGYGLIIPKENGGAEKLEPVTVEPS

Query:  REPSLAE
        RE SLAE
Subjt:  REPSLAE

XP_004147328.1 ribosome-binding factor PSRP1, chloroplastic [Cucumis sativus]3.5e-13168.94Show/hide
Query:  MAAFTSSIQTNLFSCHSLAAAASSSS--STLPASFSLHFSALKIHALSSHSSAFFNSCKCFRTIDIAPRNRHATNSFTIRMSWDGPLSSVKLIVQGKNLE
        MA  TSS+Q NL S HSL+    SSS  S  PASFSLHFSALK+HALSS++SAFFNSCK F TI+ A RNRHA+NSF+IRM+WDGPLSSVKLIVQGKNL 
Subjt:  MAAFTSSIQTNLFSCHSLAAAASSSS--STLPASFSLHFSALKIHALSSHSSAFFNSCKCFRTIDIAPRNRHATNSFTIRMSWDGPLSSVKLIVQGKNLE

Query:  EEEDLDHILWDYEFASSVWGLFHNAFGLLARCFKDYKEMIQEFLLHLPFRNKGRFLWLAELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGK
                                                                   ELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGK
Subjt:  EEEDLDHILWDYEFASSVWGLFHNAFGLLARCFKDYKEMIQEFLLHLPFRNKGRFLWLAELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGK

Query:  GPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVREPAPIVVEDEEEEVSQEDGGEVIDEMRHASEAFT
        GPRIRRCEVTLFTKKHGVVRAEEDAETV+ASIDLVSSIIQRKLRKIKEKDSD GRH+KGFDR KVREPAPIVVEDEEEEV QEDGGEVIDE         
Subjt:  GPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVREPAPIVVEDEEEEVSQEDGGEVIDEMRHASEAFT

Query:  DPLLLMLLLWSIQMYLIIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKEGGYGLIIPKENGGAEKLEPVTVEPSREPSLAE
                         IVRTKYFDMPPLT+EEAIEQLKNIDHDFYGFRNEETGEINILYKRK+GGYGLIIPKENG AEKLEPVT+E +REPSLAE
Subjt:  DPLLLMLLLWSIQMYLIIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKEGGYGLIIPKENGGAEKLEPVTVEPSREPSLAE

XP_022141073.1 ribosome-binding factor PSRP1, chloroplastic [Momordica charantia]5.0e-13069Show/hide
Query:  MAAFTSSIQTNLFSCHSLAAAASSSSSTLPASFSL----HFSALKIHALSSHSSAFFNSCKCFRTIDIAPRNRHATNSFTIRMSWDGPLSSVKLIVQGKN
        MA  TSS+ TNL S    A ++SS+ ST PASFSL    + SALKIH LSSH+S FFNSC CF TI IAPRNRHA NSFTIRMSWDGPLSSVKLIVQGKN
Subjt:  MAAFTSSIQTNLFSCHSLAAAASSSSSTLPASFSL----HFSALKIHALSSHSSAFFNSCKCFRTIDIAPRNRHATNSFTIRMSWDGPLSSVKLIVQGKN

Query:  LEEEEDLDHILWDYEFASSVWGLFHNAFGLLARCFKDYKEMIQEFLLHLPFRNKGRFLWLAELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEF
        L                                                            ELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEF
Subjt:  LEEEEDLDHILWDYEFASSVWGLFHNAFGLLARCFKDYKEMIQEFLLHLPFRNKGRFLWLAELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEF

Query:  GKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVREPAPIVVED--EEEEVSQEDGGEVIDEMRHAS
        GKGPRIRRCEVTLFTKKHGVVR EEDAETVYASIDLVSSIIQRKLRKIKEKDSD GRHMKGFDRLKVREPAPIVVED  EEEEVS ED GEVIDE     
Subjt:  GKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVREPAPIVVED--EEEEVSQEDGGEVIDEMRHAS

Query:  EAFTDPLLLMLLLWSIQMYLIIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKEGGYGLIIPKENGGAEKLEPVTVEPSREPSLAE
                             IVRTKYFDMPPLT+EEAIEQLKNIDHDFYGFRNEETGEINILYKRK+GGYGLIIPKENG AEKLEPVTVEP+REPSLAE
Subjt:  EAFTDPLLLMLLLWSIQMYLIIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKEGGYGLIIPKENGGAEKLEPVTVEPSREPSLAE

XP_022922607.1 ribosome-binding factor PSRP1, chloroplastic [Cucurbita moschata]1.9e-12967.74Show/hide
Query:  MAAFTSSIQTNLFSCHSLAAAASSSS----STLPASFSL----HFSALKIHALSSHSSAFFNSCK-CFRTIDIAPRNRHATNSFTIRMSWDGPLSSVKLI
        MAA TSS+QTNL S HSL  ++SSSS    ST P SFSL    + + LK HALSSH+SAFFNSC  CFRTI +APR RHAT SF+IRMSWDGPLSSVKLI
Subjt:  MAAFTSSIQTNLFSCHSLAAAASSSS----STLPASFSL----HFSALKIHALSSHSSAFFNSCK-CFRTIDIAPRNRHATNSFTIRMSWDGPLSSVKLI

Query:  VQGKNLEEEEDLDHILWDYEFASSVWGLFHNAFGLLARCFKDYKEMIQEFLLHLPFRNKGRFLWLAELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSV
        VQGKNL                                                            ELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSV
Subjt:  VQGKNLEEEEDLDHILWDYEFASSVWGLFHNAFGLLARCFKDYKEMIQEFLLHLPFRNKGRFLWLAELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSV

Query:  RGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVREPAPIVVEDEEEEVSQEDGGEVIDEMR
        RGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSI+QRKLRKIKEKDSDHGRHMKGFDR K+REPAPIVVEDEEEEVSQEDGGE IDE  
Subjt:  RGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVREPAPIVVEDEEEEVSQEDGGEVIDEMR

Query:  HASEAFTDPLLLMLLLWSIQMYLIIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKEGGYGLIIPKENGGAEKLEPVTVEPSREPS
                                IVRTKYFDMPPLT+EEAIEQLKNIDHDFYGFRNEETGEINILYKRK+GGYGLIIPKE+G AEK+E VTVE +RE S
Subjt:  HASEAFTDPLLLMLLLWSIQMYLIIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKEGGYGLIIPKENGGAEKLEPVTVEPSREPS

Query:  LAE
        LAE
Subjt:  LAE

XP_023551717.1 ribosome-binding factor PSRP1, chloroplastic [Cucurbita pepo subsp. pepo]5.0e-13068.33Show/hide
Query:  MAAFTSSIQTNLFSCHSLAAAASSSS--STLPASFSL----HFSALKIHALSSHSSAFFNSCK-CFRTIDIAPRNRHATNSFTIRMSWDGPLSSVKLIVQ
        MAA TSS+QTNL S HSL  ++SSS+  ST P SFSL    + + LKIHALSSH+SAFFNSC  CFRTI IAPR RHAT SF+IRMSWDGPLSSVKLIVQ
Subjt:  MAAFTSSIQTNLFSCHSLAAAASSSS--STLPASFSL----HFSALKIHALSSHSSAFFNSCK-CFRTIDIAPRNRHATNSFTIRMSWDGPLSSVKLIVQ

Query:  GKNLEEEEDLDHILWDYEFASSVWGLFHNAFGLLARCFKDYKEMIQEFLLHLPFRNKGRFLWLAELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRG
        GKNL                                                            ELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRG
Subjt:  GKNLEEEEDLDHILWDYEFASSVWGLFHNAFGLLARCFKDYKEMIQEFLLHLPFRNKGRFLWLAELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRG

Query:  GEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVREPAPIVVEDEEEEVSQEDGGEVIDEMRHA
        GEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSI+QRKLRKIKEKDSDHGRHMKGFDR K+REPAPIVVEDEEEEVSQEDGGE IDE    
Subjt:  GEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVREPAPIVVEDEEEEVSQEDGGEVIDEMRHA

Query:  SEAFTDPLLLMLLLWSIQMYLIIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKEGGYGLIIPKENGGAEKLEPVTVEPSREPSLA
                              IVRTKYFDMPPLT+EEAIEQLKNIDHDFYGFRNEETGEINILYKRK+GGYGLIIPKE+G AEK+E VTVE +RE SLA
Subjt:  SEAFTDPLLLMLLLWSIQMYLIIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKEGGYGLIIPKENGGAEKLEPVTVEPSREPSLA

Query:  E
        E
Subjt:  E

TrEMBL top hitse value%identityAlignment
A0A1S3CCT7 ribosome-binding factor PSRP1, chloroplastic7.8e-12968.43Show/hide
Query:  MAAFTSSIQTNLFSCHSLAAAASSSS--STLPASFSLHFSALKIHALSSHSSAFFNSCKCFRTIDIAPRNRHATNSFTIRMSWDGPLSSVKLIVQGKNLE
        MA  TSS+Q NL S HSL     SSS  S  PA FSLHFSALK+HALSS++SAFFNSCK F TI+ A RNRHA+NSF+IRM+WDG LSSVKLIVQGKNL 
Subjt:  MAAFTSSIQTNLFSCHSLAAAASSSS--STLPASFSLHFSALKIHALSSHSSAFFNSCKCFRTIDIAPRNRHATNSFTIRMSWDGPLSSVKLIVQGKNLE

Query:  EEEDLDHILWDYEFASSVWGLFHNAFGLLARCFKDYKEMIQEFLLHLPFRNKGRFLWLAELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGK
                                                                   ELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGK
Subjt:  EEEDLDHILWDYEFASSVWGLFHNAFGLLARCFKDYKEMIQEFLLHLPFRNKGRFLWLAELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGK

Query:  GPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVREPAPIVVEDEEEEVSQEDGGEVIDEMRHASEAFT
        G RIRRCEVTLFTKKHGVVRAEEDAETV+ASIDLVSSIIQRKLRKIKEKDSD GRH+KGFDR KVREPAPIVVEDEEEEV QEDGGEVIDE         
Subjt:  GPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVREPAPIVVEDEEEEVSQEDGGEVIDEMRHASEAFT

Query:  DPLLLMLLLWSIQMYLIIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKEGGYGLIIPKENGGAEKLEPVTVEPSREPSLAE
                         IVRTKYFDMPPLT+EEAIEQLKNIDHDFYGFRNEETGEINILYKRK+GGYGLIIPKENG AEKLEPVTVE +REPSLAE
Subjt:  DPLLLMLLLWSIQMYLIIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKEGGYGLIIPKENGGAEKLEPVTVEPSREPSLAE

A0A5D3BQR1 Ribosome-binding factor PSRP17.8e-12968.43Show/hide
Query:  MAAFTSSIQTNLFSCHSLAAAASSSS--STLPASFSLHFSALKIHALSSHSSAFFNSCKCFRTIDIAPRNRHATNSFTIRMSWDGPLSSVKLIVQGKNLE
        MA  TSS+Q NL S HSL     SSS  S  PA FSLHFSALK+HALSS++SAFFNSCK F TI+ A RNRHA+NSF+IRM+WDG LSSVKLIVQGKNL 
Subjt:  MAAFTSSIQTNLFSCHSLAAAASSSS--STLPASFSLHFSALKIHALSSHSSAFFNSCKCFRTIDIAPRNRHATNSFTIRMSWDGPLSSVKLIVQGKNLE

Query:  EEEDLDHILWDYEFASSVWGLFHNAFGLLARCFKDYKEMIQEFLLHLPFRNKGRFLWLAELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGK
                                                                   ELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGK
Subjt:  EEEDLDHILWDYEFASSVWGLFHNAFGLLARCFKDYKEMIQEFLLHLPFRNKGRFLWLAELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGK

Query:  GPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVREPAPIVVEDEEEEVSQEDGGEVIDEMRHASEAFT
        G RIRRCEVTLFTKKHGVVRAEEDAETV+ASIDLVSSIIQRKLRKIKEKDSD GRH+KGFDR KVREPAPIVVEDEEEEV QEDGGEVIDE         
Subjt:  GPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVREPAPIVVEDEEEEVSQEDGGEVIDEMRHASEAFT

Query:  DPLLLMLLLWSIQMYLIIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKEGGYGLIIPKENGGAEKLEPVTVEPSREPSLAE
                         IVRTKYFDMPPLT+EEAIEQLKNIDHDFYGFRNEETGEINILYKRK+GGYGLIIPKENG AEKLEPVTVE +REPSLAE
Subjt:  DPLLLMLLLWSIQMYLIIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKEGGYGLIIPKENGGAEKLEPVTVEPSREPSLAE

A0A6J1CJG5 ribosome-binding factor PSRP1, chloroplastic2.4e-13069Show/hide
Query:  MAAFTSSIQTNLFSCHSLAAAASSSSSTLPASFSL----HFSALKIHALSSHSSAFFNSCKCFRTIDIAPRNRHATNSFTIRMSWDGPLSSVKLIVQGKN
        MA  TSS+ TNL S    A ++SS+ ST PASFSL    + SALKIH LSSH+S FFNSC CF TI IAPRNRHA NSFTIRMSWDGPLSSVKLIVQGKN
Subjt:  MAAFTSSIQTNLFSCHSLAAAASSSSSTLPASFSL----HFSALKIHALSSHSSAFFNSCKCFRTIDIAPRNRHATNSFTIRMSWDGPLSSVKLIVQGKN

Query:  LEEEEDLDHILWDYEFASSVWGLFHNAFGLLARCFKDYKEMIQEFLLHLPFRNKGRFLWLAELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEF
        L                                                            ELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEF
Subjt:  LEEEEDLDHILWDYEFASSVWGLFHNAFGLLARCFKDYKEMIQEFLLHLPFRNKGRFLWLAELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEF

Query:  GKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVREPAPIVVED--EEEEVSQEDGGEVIDEMRHAS
        GKGPRIRRCEVTLFTKKHGVVR EEDAETVYASIDLVSSIIQRKLRKIKEKDSD GRHMKGFDRLKVREPAPIVVED  EEEEVS ED GEVIDE     
Subjt:  GKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVREPAPIVVED--EEEEVSQEDGGEVIDEMRHAS

Query:  EAFTDPLLLMLLLWSIQMYLIIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKEGGYGLIIPKENGGAEKLEPVTVEPSREPSLAE
                             IVRTKYFDMPPLT+EEAIEQLKNIDHDFYGFRNEETGEINILYKRK+GGYGLIIPKENG AEKLEPVTVEP+REPSLAE
Subjt:  EAFTDPLLLMLLLWSIQMYLIIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKEGGYGLIIPKENGGAEKLEPVTVEPSREPSLAE

A0A6J1E3S3 ribosome-binding factor PSRP1, chloroplastic9.2e-13067.74Show/hide
Query:  MAAFTSSIQTNLFSCHSLAAAASSSS----STLPASFSL----HFSALKIHALSSHSSAFFNSCK-CFRTIDIAPRNRHATNSFTIRMSWDGPLSSVKLI
        MAA TSS+QTNL S HSL  ++SSSS    ST P SFSL    + + LK HALSSH+SAFFNSC  CFRTI +APR RHAT SF+IRMSWDGPLSSVKLI
Subjt:  MAAFTSSIQTNLFSCHSLAAAASSSS----STLPASFSL----HFSALKIHALSSHSSAFFNSCK-CFRTIDIAPRNRHATNSFTIRMSWDGPLSSVKLI

Query:  VQGKNLEEEEDLDHILWDYEFASSVWGLFHNAFGLLARCFKDYKEMIQEFLLHLPFRNKGRFLWLAELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSV
        VQGKNL                                                            ELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSV
Subjt:  VQGKNLEEEEDLDHILWDYEFASSVWGLFHNAFGLLARCFKDYKEMIQEFLLHLPFRNKGRFLWLAELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSV

Query:  RGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVREPAPIVVEDEEEEVSQEDGGEVIDEMR
        RGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSI+QRKLRKIKEKDSDHGRHMKGFDR K+REPAPIVVEDEEEEVSQEDGGE IDE  
Subjt:  RGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVREPAPIVVEDEEEEVSQEDGGEVIDEMR

Query:  HASEAFTDPLLLMLLLWSIQMYLIIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKEGGYGLIIPKENGGAEKLEPVTVEPSREPS
                                IVRTKYFDMPPLT+EEAIEQLKNIDHDFYGFRNEETGEINILYKRK+GGYGLIIPKE+G AEK+E VTVE +RE S
Subjt:  HASEAFTDPLLLMLLLWSIQMYLIIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKEGGYGLIIPKENGGAEKLEPVTVEPSREPS

Query:  LAE
        LAE
Subjt:  LAE

A0A6J1J523 ribosome-binding factor PSRP1, chloroplastic4.7e-12667.96Show/hide
Query:  FSCHSLAAAASSSSSTLPASFSL----HFSALKIHALSSHSSAFFNSCK-CFRTIDIAPRNRHATNSFTIRMSWDGPLSSVKLIVQGKNLEEEEDLDHIL
        FS  S ++++SS+ ST P SFSL    + + LKIHALSSH+SAFFNSC  CFRTI IAPR RHAT SF+IRMSWDGPLSSVKLIVQGKNL          
Subjt:  FSCHSLAAAASSSSSTLPASFSL----HFSALKIHALSSHSSAFFNSCK-CFRTIDIAPRNRHATNSFTIRMSWDGPLSSVKLIVQGKNLEEEEDLDHIL

Query:  WDYEFASSVWGLFHNAFGLLARCFKDYKEMIQEFLLHLPFRNKGRFLWLAELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEV
                                                          ELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEV
Subjt:  WDYEFASSVWGLFHNAFGLLARCFKDYKEMIQEFLLHLPFRNKGRFLWLAELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEV

Query:  TLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVREPAPIVVEDEEEEVSQEDGGEVIDEMRHASEAFTDPLLLMLLL
        TLFTKKHGVVRAEEDAETVYASIDLVSSI+QRKLRKIKEKDSDHGRHMKGFDR K+REPAPIVVEDEEEEVSQEDGGE IDE                  
Subjt:  TLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVREPAPIVVEDEEEEVSQEDGGEVIDEMRHASEAFTDPLLLMLLL

Query:  WSIQMYLIIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKEGGYGLIIPKENGGAEKLEPVTVEPSREPSLAE
                IVRTKYFDMPPLT+EEAIEQLKNIDHDFYGFRNEETGEINILYKRK+GGYGLIIPKENG AEK+E VTVE +RE SLAE
Subjt:  WSIQMYLIIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKEGGYGLIIPKENGGAEKLEPVTVEPSREPSLAE

SwissProt top hitse value%identityAlignment
P19954 Ribosome-binding factor PSRP1, chloroplastic1.2e-8149.72Show/hide
Query:  LSSHSSAFFNSCKCFRTIDIAPRNRHATNSFTIRMSWDGPLSSVKLIVQGKNLEEEEDLDHILWDYEFASSVWGLFHNAFGLLARCFKDYKEMIQEFLLH
        LSS  S F NSC     + +            + MSWDGPLSSVKLI+QG+NL                                               
Subjt:  LSSHSSAFFNSCKCFRTIDIAPRNRHATNSFTIRMSWDGPLSSVKLIVQGKNLEEEEDLDHILWDYEFASSVWGLFHNAFGLLARCFKDYKEMIQEFLLH

Query:  LPFRNKGRFLWLAELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKI
                     E+++ V+ HVE+KVGK+V KHSHLVREVDVRLS RGG+  KGP++RRCEVTLFTK+HGV+RAEEDAE++Y+SIDLVSSIIQRKLRKI
Subjt:  LPFRNKGRFLWLAELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKI

Query:  KEKDSDHGRHMKGFDRLKVREPAPIVVEDEE--EEVSQEDGGEVIDEMRHASEAFTDPLLLMLLLWSIQMYLIIVRTKYFDMPPLTIEEAIEQLKNIDHD
        K+K SDHGRHMKGF+R KVR+P P+ +  EE  EEV        +++     E                    +VRTKYFDMPPLTI EA+EQL+N+DHD
Subjt:  KEKDSDHGRHMKGFDRLKVREPAPIVVEDEE--EEVSQEDGGEVIDEMRHASEAFTDPLLLMLLLWSIQMYLIIVRTKYFDMPPLTIEEAIEQLKNIDHD

Query:  FYGFRNEETGEINILYKRKEGGYGLIIPKENGGAEKLEPVTVEPSREPSLAE
        FY FRNEETG+INILYKRKEGGYGLIIPK+ G  EKLE + V+  ++PS AE
Subjt:  FYGFRNEETGEINILYKRKEGGYGLIIPKENGGAEKLEPVTVEPSREPSLAE

P47908 Ribosome hibernation promotion factor3.9e-2437.21Show/hide
Query:  LTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKGF
        +TE++  +VE K+ KA +       +VDV LSV      +     + EVT++     V+RA+E +E +YASIDLVS  I R+LRK KEK+     H    
Subjt:  LTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKGF

Query:  DRLKVREPAPIVVEDEEEEVSQEDGGEVIDEM--RHASEAFTDPLLLMLLLWSIQMYLIIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINI
                    V+++  EV  ED   V D +    A E  ++                +VR KYF MPP+TI+EA+EQL+ +DHDFY F N++T  IN+
Subjt:  DRLKVREPAPIVVEDEEEEVSQEDGGEVIDEM--RHASEAFTDPLLLMLLLWSIQMYLIIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINI

Query:  LYKRKEGGYGLIIPK
        +Y R  GGYG+I P+
Subjt:  LYKRKEGGYGLIIPK

P74518 Ribosome hibernation promotion factor8.3e-2738.91Show/hide
Query:  LTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRI---RRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEK--DSDHGR
        +TEA+  +VEEKV +AV+   +L  +VDV LSV      +  RI    + EVT++     V+RA+E +E +YASIDLV+  I R+LRK KE+  D  HG 
Subjt:  LTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRI---RRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEK--DSDHGR

Query:  HMKGFDRLKVREPAPIVVEDE--EEEVSQEDGGEVIDEMRHASEAFTDPLLLMLLLWSIQMYLIIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEET
               +K  E    +VED+  EE +  +   E+  E                          ++R KYF MPP+ IE+A+EQL+ +DHDFY FRN++T
Subjt:  HMKGFDRLKVREPAPIVVEDE--EEEVSQEDGGEVIDEMRHASEAFTDPLLLMLLLWSIQMYLIIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEET

Query:  GEINILYKRKEGGYGLIIPKE
         EIN++Y R  GGYG+I P +
Subjt:  GEINILYKRKEGGYGLIIPKE

Q4L4H7 Ribosome hibernation promotion factor1.2e-1430.81Show/hide
Query:  LTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEK-DSDHGRHMKG
        +T+A++ ++E+K+GK ++++ + V      + V+  +        + EVT+   K+  +RAEE  + +YA IDLV+S ++R++RK K + +  H  H   
Subjt:  LTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEK-DSDHGRHMKG

Query:  FDRLKVREPAPIVVEDEEEEVSQEDGGEVIDEMRHASEAFTDPLLLMLLLWSIQMYLIIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINIL
               EP   V   E +E   E+  +V  E  + SE                  + I+R+K F + P+  EEA+ Q++ + HDFY F + ET   +I+
Subjt:  FDRLKVREPAPIVVEDEEEEVSQEDGGEVIDEMRHASEAFTDPLLLMLLLWSIQMYLIIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINIL

Query:  YKRKEGGYGLI
        YKRK+G YGLI
Subjt:  YKRKEGGYGLI

Q9RVE7 Ribosome hibernation promotion factor4.3e-1531.13Show/hide
Query:  ELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKG
        E+TE ++++VEEK+ + + +++  + +  V L+VR  +     R  R EV L     G++RAEE    +YA+ID  S +++R+LRK K       R+MK 
Subjt:  ELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKG

Query:  FDRLKVR-EPAPIVVEDEEEEVSQEDGGEVIDEMRHASEAFTDPLLLMLLLWSIQMYLIIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINI
          R + R EP P      E EV+ +  G  +D++                    + +  IVR K F++ P++ E+A+ Q++ + HDFY F++ + G+  +
Subjt:  FDRLKVR-EPAPIVVEDEEEEVSQEDGGEVIDEMRHASEAFTDPLLLMLLLWSIQMYLIIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINI

Query:  LYKRKEGGYGLI
        +Y+R++G YGLI
Subjt:  LYKRKEGGYGLI

Arabidopsis top hitse value%identityAlignment
AT5G24490.1 30S ribosomal protein, putative3.0e-8855.62Show/hide
Query:  RNRHATNSFTIRMSWDGPLSSVKLIVQGKNLEEEEDLDHILWDYEFASSVWGLFHNAFGLLARCFKDYKEMIQEFLLHLPFRNKGRFLWLAELTEAVKKH
        R+ +  +S  ++MSWDGPL+SVKLI+QGKNL                                                            EL+E +K+H
Subjt:  RNRHATNSFTIRMSWDGPLSSVKLIVQGKNLEEEEDLDHILWDYEFASSVWGLFHNAFGLLARCFKDYKEMIQEFLLHLPFRNKGRFLWLAELTEAVKKH

Query:  VEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVREP
        VEEKVGK+VQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYA IDLVS+IIQRKLRKIKEKDSDHGRHMKGF+RLKVREP
Subjt:  VEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVREP

Query:  A-PIVVEDEEEEVSQEDGGEVIDEMRHASEAFTDPLLLMLLLWSIQMYLIIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKEGGY
            VVED E+      G E  ++                      +   IVRTK F+MPPLT+ EA+EQL+ + HDFYGF+NEETGEINI+YKRKEGGY
Subjt:  A-PIVVEDEEEEVSQEDGGEVIDEMRHASEAFTDPLLLMLLLWSIQMYLIIVRTKYFDMPPLTIEEAIEQLKNIDHDFYGFRNEETGEINILYKRKEGGY

Query:  GLIIPKENGGAEKLEPVTVEPSREPSLAE
        GLIIPK++G AEK+EP+  E   E S AE
Subjt:  GLIIPKENGGAEKLEPVTVEPSREPSLAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCTTTCACCTCTTCCATACAAACCAATCTCTTTTCCTGCCATTCCTTAGCTGCTGCTGCTTCTTCTTCTTCTTCTACTTTACCCGCTTCCTTCTCTCTTCACTT
CTCTGCTCTCAAAATTCACGCTCTTTCTTCCCATAGTTCTGCTTTCTTCAACTCCTGCAAGTGCTTCCGAACCATTGACATTGCACCTCGCAACCGTCATGCCACAAACT
CTTTCACTATTCGGATGTCCTGGGACGGCCCCCTCTCCTCTGTCAAATTAATTGTTCAAGGCAAGAATTTGGAGGAGGAGGAAGATCTAGACCATATTTTGTGGGATTAC
GAGTTTGCTAGTTCGGTGTGGGGTTTGTTCCACAACGCTTTCGGGTTACTGGCTAGATGCTTCAAAGACTACAAGGAGATGATCCAAGAGTTCCTCCTCCATCTCCCATT
TCGCAATAAGGGAAGGTTTTTATGGCTAGCTGAGTTGACTGAAGCGGTTAAGAAGCATGTGGAAGAGAAGGTTGGCAAGGCCGTCCAGAAGCACAGTCACTTAGTGAGAG
AAGTGGATGTCAGGCTATCAGTTAGAGGTGGAGAGTTTGGGAAGGGTCCAAGGATTAGAAGATGCGAGGTTACTTTATTCACAAAGAAGCATGGAGTTGTGCGGGCAGAG
GAAGATGCTGAGACCGTCTATGCAAGCATTGATTTGGTATCTTCCATCATACAAAGGAAGTTGAGAAAAATTAAAGAGAAAGATTCAGACCATGGCCGACATATGAAAGG
ATTTGACAGATTGAAAGTAAGAGAACCTGCACCAATAGTAGTTGAAGATGAGGAAGAAGAAGTTTCTCAAGAAGATGGTGGAGAAGTTATTGATGAGATGAGACATGCCT
CCGAAGCTTTTACTGATCCTTTGCTCTTAATGCTTCTTTTGTGGTCAATTCAAATGTATTTGATTATTGTACGGACAAAATACTTTGATATGCCACCTTTGACCATTGAA
GAAGCAATCGAACAACTCAAAAATATTGACCATGATTTCTATGGTTTCCGCAATGAAGAAACTGGTGAGATTAACATCTTATATAAAAGAAAGGAGGGAGGATATGGACT
TATCATCCCAAAAGAAAATGGCGGAGCTGAGAAATTAGAACCTGTGACAGTTGAACCTTCCAGAGAACCTTCCTTGGCGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGCTTTCACCTCTTCCATACAAACCAATCTCTTTTCCTGCCATTCCTTAGCTGCTGCTGCTTCTTCTTCTTCTTCTACTTTACCCGCTTCCTTCTCTCTTCACTT
CTCTGCTCTCAAAATTCACGCTCTTTCTTCCCATAGTTCTGCTTTCTTCAACTCCTGCAAGTGCTTCCGAACCATTGACATTGCACCTCGCAACCGTCATGCCACAAACT
CTTTCACTATTCGGATGTCCTGGGACGGCCCCCTCTCCTCTGTCAAATTAATTGTTCAAGGCAAGAATTTGGAGGAGGAGGAAGATCTAGACCATATTTTGTGGGATTAC
GAGTTTGCTAGTTCGGTGTGGGGTTTGTTCCACAACGCTTTCGGGTTACTGGCTAGATGCTTCAAAGACTACAAGGAGATGATCCAAGAGTTCCTCCTCCATCTCCCATT
TCGCAATAAGGGAAGGTTTTTATGGCTAGCTGAGTTGACTGAAGCGGTTAAGAAGCATGTGGAAGAGAAGGTTGGCAAGGCCGTCCAGAAGCACAGTCACTTAGTGAGAG
AAGTGGATGTCAGGCTATCAGTTAGAGGTGGAGAGTTTGGGAAGGGTCCAAGGATTAGAAGATGCGAGGTTACTTTATTCACAAAGAAGCATGGAGTTGTGCGGGCAGAG
GAAGATGCTGAGACCGTCTATGCAAGCATTGATTTGGTATCTTCCATCATACAAAGGAAGTTGAGAAAAATTAAAGAGAAAGATTCAGACCATGGCCGACATATGAAAGG
ATTTGACAGATTGAAAGTAAGAGAACCTGCACCAATAGTAGTTGAAGATGAGGAAGAAGAAGTTTCTCAAGAAGATGGTGGAGAAGTTATTGATGAGATGAGACATGCCT
CCGAAGCTTTTACTGATCCTTTGCTCTTAATGCTTCTTTTGTGGTCAATTCAAATGTATTTGATTATTGTACGGACAAAATACTTTGATATGCCACCTTTGACCATTGAA
GAAGCAATCGAACAACTCAAAAATATTGACCATGATTTCTATGGTTTCCGCAATGAAGAAACTGGTGAGATTAACATCTTATATAAAAGAAAGGAGGGAGGATATGGACT
TATCATCCCAAAAGAAAATGGCGGAGCTGAGAAATTAGAACCTGTGACAGTTGAACCTTCCAGAGAACCTTCCTTGGCGGAATGA
Protein sequenceShow/hide protein sequence
MAAFTSSIQTNLFSCHSLAAAASSSSSTLPASFSLHFSALKIHALSSHSSAFFNSCKCFRTIDIAPRNRHATNSFTIRMSWDGPLSSVKLIVQGKNLEEEEDLDHILWDY
EFASSVWGLFHNAFGLLARCFKDYKEMIQEFLLHLPFRNKGRFLWLAELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAE
EDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVREPAPIVVEDEEEEVSQEDGGEVIDEMRHASEAFTDPLLLMLLLWSIQMYLIIVRTKYFDMPPLTIE
EAIEQLKNIDHDFYGFRNEETGEINILYKRKEGGYGLIIPKENGGAEKLEPVTVEPSREPSLAE