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Spg002382 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg002382
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionendonuclease MutS2
Genome locationscaffold6:443933..445076
RNA-Seq ExpressionSpg002382
SyntenySpg002382
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0000166 - nucleotide binding (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022141291.1 uncharacterized protein LOC111011726 isoform X1 [Momordica charantia]2.0e-1569.01Show/hide
Query:  LYQLMDSLVKNTKSGTSFLEVGNIDGRWCIKSEGDQLLDFKGLLLSSKRTVVARGERTVVGSAS-FPTEDE
        LYQLMDSLV+N KSGTSFLEVGN+DGRWCIKSEG+QL+DFKGLLLSS     A G  T++   S  P  DE
Subjt:  LYQLMDSLVKNTKSGTSFLEVGNIDGRWCIKSEGDQLLDFKGLLLSSKRTVVARGERTVVGSAS-FPTEDE
XP_022141292.1 uncharacterized protein LOC111011726 isoform X2 [Momordica charantia]2.0e-1569.01Show/hide
Query:  LYQLMDSLVKNTKSGTSFLEVGNIDGRWCIKSEGDQLLDFKGLLLSSKRTVVARGERTVVGSAS-FPTEDE
        LYQLMDSLV+N KSGTSFLEVGN+DGRWCIKSEG+QL+DFKGLLLSS     A G  T++   S  P  DE
Subjt:  LYQLMDSLVKNTKSGTSFLEVGNIDGRWCIKSEGDQLLDFKGLLLSSKRTVVARGERTVVGSAS-FPTEDE
XP_022141293.1 uncharacterized protein LOC111011726 isoform X3 [Momordica charantia]2.0e-1569.01Show/hide
Query:  LYQLMDSLVKNTKSGTSFLEVGNIDGRWCIKSEGDQLLDFKGLLLSSKRTVVARGERTVVGSAS-FPTEDE
        LYQLMDSLV+N KSGTSFLEVGN+DGRWCIKSEG+QL+DFKGLLLSS     A G  T++   S  P  DE
Subjt:  LYQLMDSLVKNTKSGTSFLEVGNIDGRWCIKSEGDQLLDFKGLLLSSKRTVVARGERTVVGSAS-FPTEDE
XP_022141294.1 uncharacterized protein LOC111011726 isoform X4 [Momordica charantia]2.0e-1569.01Show/hide
Query:  LYQLMDSLVKNTKSGTSFLEVGNIDGRWCIKSEGDQLLDFKGLLLSSKRTVVARGERTVVGSAS-FPTEDE
        LYQLMDSLV+N KSGTSFLEVGN+DGRWCIKSEG+QL+DFKGLLLSS     A G  T++   S  P  DE
Subjt:  LYQLMDSLVKNTKSGTSFLEVGNIDGRWCIKSEGDQLLDFKGLLLSSKRTVVARGERTVVGSAS-FPTEDE
XP_022141295.1 uncharacterized protein LOC111011726 isoform X5 [Momordica charantia]2.0e-1569.01Show/hide
Query:  LYQLMDSLVKNTKSGTSFLEVGNIDGRWCIKSEGDQLLDFKGLLLSSKRTVVARGERTVVGSAS-FPTEDE
        LYQLMDSLV+N KSGTSFLEVGN+DGRWCIKSEG+QL+DFKGLLLSS     A G  T++   S  P  DE
Subjt:  LYQLMDSLVKNTKSGTSFLEVGNIDGRWCIKSEGDQLLDFKGLLLSSKRTVVARGERTVVGSAS-FPTEDE
TrEMBL top hitse value%identityAlignment
A0A6J1CHN4 uncharacterized protein LOC111011726 isoform X59.7e-1669.01Show/hide
Query:  LYQLMDSLVKNTKSGTSFLEVGNIDGRWCIKSEGDQLLDFKGLLLSSKRTVVARGERTVVGSAS-FPTEDE
        LYQLMDSLV+N KSGTSFLEVGN+DGRWCIKSEG+QL+DFKGLLLSS     A G  T++   S  P  DE
Subjt:  LYQLMDSLVKNTKSGTSFLEVGNIDGRWCIKSEGDQLLDFKGLLLSSKRTVVARGERTVVGSAS-FPTEDE
A0A6J1CI69 uncharacterized protein LOC111011726 isoform X49.7e-1669.01Show/hide
Query:  LYQLMDSLVKNTKSGTSFLEVGNIDGRWCIKSEGDQLLDFKGLLLSSKRTVVARGERTVVGSAS-FPTEDE
        LYQLMDSLV+N KSGTSFLEVGN+DGRWCIKSEG+QL+DFKGLLLSS     A G  T++   S  P  DE
Subjt:  LYQLMDSLVKNTKSGTSFLEVGNIDGRWCIKSEGDQLLDFKGLLLSSKRTVVARGERTVVGSAS-FPTEDE
A0A6J1CIQ4 uncharacterized protein LOC111011726 isoform X19.7e-1669.01Show/hide
Query:  LYQLMDSLVKNTKSGTSFLEVGNIDGRWCIKSEGDQLLDFKGLLLSSKRTVVARGERTVVGSAS-FPTEDE
        LYQLMDSLV+N KSGTSFLEVGN+DGRWCIKSEG+QL+DFKGLLLSS     A G  T++   S  P  DE
Subjt:  LYQLMDSLVKNTKSGTSFLEVGNIDGRWCIKSEGDQLLDFKGLLLSSKRTVVARGERTVVGSAS-FPTEDE
A0A6J1CJG8 uncharacterized protein LOC111011726 isoform X29.7e-1669.01Show/hide
Query:  LYQLMDSLVKNTKSGTSFLEVGNIDGRWCIKSEGDQLLDFKGLLLSSKRTVVARGERTVVGSAS-FPTEDE
        LYQLMDSLV+N KSGTSFLEVGN+DGRWCIKSEG+QL+DFKGLLLSS     A G  T++   S  P  DE
Subjt:  LYQLMDSLVKNTKSGTSFLEVGNIDGRWCIKSEGDQLLDFKGLLLSSKRTVVARGERTVVGSAS-FPTEDE
A0A6J1CK29 uncharacterized protein LOC111011726 isoform X39.7e-1669.01Show/hide
Query:  LYQLMDSLVKNTKSGTSFLEVGNIDGRWCIKSEGDQLLDFKGLLLSSKRTVVARGERTVVGSAS-FPTEDE
        LYQLMDSLV+N KSGTSFLEVGN+DGRWCIKSEG+QL+DFKGLLLSS     A G  T++   S  P  DE
Subjt:  LYQLMDSLVKNTKSGTSFLEVGNIDGRWCIKSEGDQLLDFKGLLLSSKRTVVARGERTVVGSAS-FPTEDE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G54090.1 DNA mismatch repair protein MutS, type 24.1e-0644.68Show/hide
Query:  LYQLMDSLVKNTKSGTSFLEVGNIDGRWCIKSEGDQLLDFKGLLLSS
        L QL+D+++++ K   S +    IDGRWCI+   +QL    GLLLSS
Subjt:  LYQLMDSLVKNTKSGTSFLEVGNIDGRWCIKSEGDQLLDFKGLLLSS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTTATTGTACGCTACCATACATGTAATAGTATTAGCTACCTTATATCAGTTAATGGACAGCCTAGTTAAGAATACAAAGAGTGGAACTTCCTTTTTGGAAGTGGG
AAATATTGATGGAAGGTGGTGTATAAAATCAGAGGGCGATCAATTGCTGGATTTTAAGGGTCTGCTGTTGTCCAGCAAGCGTACGGTTGTTGCTCGTGGTGAGAGGACGG
TGGTAGGCTCCGCCTCTTTTCCAACCGAAGATGAATCTCCTCCCACGTTGGTCGAGATTCTCTTGGTGGTCATAGTGGAAGCGCCCCAAAAATCGTGCGCTCTGATACCA
AATATGGTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTTTATTGTACGCTACCATACATGTAATAGTATTAGCTACCTTATATCAGTTAATGGACAGCCTAGTTAAGAATACAAAGAGTGGAACTTCCTTTTTGGAAGTGGG
AAATATTGATGGAAGGTGGTGTATAAAATCAGAGGGCGATCAATTGCTGGATTTTAAGGGTCTGCTGTTGTCCAGCAAGCGTACGGTTGTTGCTCGTGGTGAGAGGACGG
TGGTAGGCTCCGCCTCTTTTCCAACCGAAGATGAATCTCCTCCCACGTTGGTCGAGATTCTCTTGGTGGTCATAGTGGAAGCGCCCCAAAAATCGTGCGCTCTGATACCA
AATATGGTGTAG
Protein sequenceShow/hide protein sequence
MFLLYATIHVIVLATLYQLMDSLVKNTKSGTSFLEVGNIDGRWCIKSEGDQLLDFKGLLLSSKRTVVARGERTVVGSASFPTEDESPPTLVEILLVVIVEAPQKSCALIP
NMV