; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg002390 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg002390
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionrRNA 2'-O-methyltransferase fibrillarin 2-like protein
Genome locationscaffold6:1350466..1354161
RNA-Seq ExpressionSpg002390
SyntenySpg002390
Gene Ontology termsGO:0000494 - box C/D snoRNA 3'-end processing (biological process)
GO:0031167 - rRNA methylation (biological process)
GO:1990258 - histone glutamine methylation (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0031428 - box C/D snoRNP complex (cellular component)
GO:0032040 - small-subunit processome (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0008649 - rRNA methyltransferase activity (molecular function)
GO:1990259 - histone-glutamine methyltransferase activity (molecular function)
InterPro domainsIPR000692 - Fibrillarin
IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013251.1 Mediator of RNA polymerase II transcription subunit 36a, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-9876.69Show/hide
Query:  MQSRGGGRGGGRGRGGGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWI
        M SRGGGRGGGRGRGGGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTK+EYRVWNPFRSKLAAAVLGGVDDIWI
Subjt:  MQSRGGGRGGGRGRGGGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWI

Query:  KPGARVLYLGAASGTTVSHVSDVVGP-----------------------------------------------------------ARILALNASYFLKAG
        KPGARVLYLGAASGTTVSHVSDVVGP                                                           ARILALNASYFLKAG
Subjt:  KPGARVLYLGAASGTTVSHVSDVVGP-----------------------------------------------------------ARILALNASYFLKAG

Query:  GHFVISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA
        GHFVISIKANCIDSTVPAEAVFASEVNKLKAD FKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA
Subjt:  GHFVISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA

XP_022141240.1 mediator of RNA polymerase II transcription subunit 36a-like [Momordica charantia]1.2e-9876.69Show/hide
Query:  MQSRGGGRGGGRGRGGGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWI
        M SRGGGRGGGRGRGGGRGGGMKGGSKVV+EPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWI
Subjt:  MQSRGGGRGGGRGRGGGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWI

Query:  KPGARVLYLGAASGTTVSHVSDVVGP-----------------------------------------------------------ARILALNASYFLKAG
        KPGARVLYLGAASGTTVSHVSDVVGP                                                           ARILALNASYFLKAG
Subjt:  KPGARVLYLGAASGTTVSHVSDVVGP-----------------------------------------------------------ARILALNASYFLKAG

Query:  GHFVISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA
        GHFVISIKANCIDSTVPAEAVFASEVNKLKAD FKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA
Subjt:  GHFVISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA

XP_022945875.1 probable mediator of RNA polymerase II transcription subunit 36b [Cucurbita moschata]1.2e-9876.69Show/hide
Query:  MQSRGGGRGGGRGRGGGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWI
        M SRGGGRGGGRGRGGGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTK+EYRVWNPFRSKLAAAVLGGVDDIWI
Subjt:  MQSRGGGRGGGRGRGGGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWI

Query:  KPGARVLYLGAASGTTVSHVSDVVGP-----------------------------------------------------------ARILALNASYFLKAG
        KPGARVLYLGAASGTTVSHVSDVVGP                                                           ARILALNASYFLKAG
Subjt:  KPGARVLYLGAASGTTVSHVSDVVGP-----------------------------------------------------------ARILALNASYFLKAG

Query:  GHFVISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA
        GHFVISIKANCIDSTVPAEAVFASEVNKLKAD FKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA
Subjt:  GHFVISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA

XP_023542882.1 mediator of RNA polymerase II transcription subunit 36a-like [Cucurbita pepo subsp. pepo]1.2e-9876.69Show/hide
Query:  MQSRGGGRGGGRGRGGGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWI
        M SRGGGRGGGRGRGGGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTK+EYRVWNPFRSKLAAAVLGGVDDIWI
Subjt:  MQSRGGGRGGGRGRGGGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWI

Query:  KPGARVLYLGAASGTTVSHVSDVVGP-----------------------------------------------------------ARILALNASYFLKAG
        KPGARVLYLGAASGTTVSHVSDVVGP                                                           ARILALNASYFLKAG
Subjt:  KPGARVLYLGAASGTTVSHVSDVVGP-----------------------------------------------------------ARILALNASYFLKAG

Query:  GHFVISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA
        GHFVISIKANCIDSTVPAEAVFASEVNKLKAD FKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA
Subjt:  GHFVISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA

XP_038875959.1 rRNA 2'-O-methyltransferase fibrillarin 1-like [Benincasa hispida]2.0e-9876.69Show/hide
Query:  MQSRGGGRGGGRGRGGGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWI
        MQSRGGGRGGGRGRGGGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTK+EYRVWNPFRSKLAAAVLGGVDDIWI
Subjt:  MQSRGGGRGGGRGRGGGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWI

Query:  KPGARVLYLGAASGTTVSHVSDVVGP-----------------------------------------------------------ARILALNASYFLKAG
        KPGARVLYLGAASGTTVSHVSDVVGP                                                           ARILALNASYFLKAG
Subjt:  KPGARVLYLGAASGTTVSHVSDVVGP-----------------------------------------------------------ARILALNASYFLKAG

Query:  GHFVISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA
        GHFVISIKANCIDSTVPAEAVFASEVNKLKAD FKPTEQVTLEPFERDHACVVGIYRAPKKQK AA
Subjt:  GHFVISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA

TrEMBL top hitse value%identityAlignment
A0A1S3AY25 mediator of RNA polymerase II transcription subunit 36a-like2.2e-9876.32Show/hide
Query:  MQSRGGGRGGGRGRGGGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWI
        MQSRGGGRGGGRGRGGGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMV+GESVYNEKRISVQNEDGTK+EYRVWNPFRSKLAAAVLGGVDDIWI
Subjt:  MQSRGGGRGGGRGRGGGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWI

Query:  KPGARVLYLGAASGTTVSHVSDVVGP-----------------------------------------------------------ARILALNASYFLKAG
        KPGARVLYLGAASGTTVSHVSDVVGP                                                           ARILALNASYFLKAG
Subjt:  KPGARVLYLGAASGTTVSHVSDVVGP-----------------------------------------------------------ARILALNASYFLKAG

Query:  GHFVISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA
        GHFVISIKANCIDSTVPAEAVFASEVNKLKAD FKPTEQVTLEPFERDHACVVGIYRAPKKQK AA
Subjt:  GHFVISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA

A0A6J1CHH3 mediator of RNA polymerase II transcription subunit 36a-like5.8e-9976.69Show/hide
Query:  MQSRGGGRGGGRGRGGGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWI
        M SRGGGRGGGRGRGGGRGGGMKGGSKVV+EPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWI
Subjt:  MQSRGGGRGGGRGRGGGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWI

Query:  KPGARVLYLGAASGTTVSHVSDVVGP-----------------------------------------------------------ARILALNASYFLKAG
        KPGARVLYLGAASGTTVSHVSDVVGP                                                           ARILALNASYFLKAG
Subjt:  KPGARVLYLGAASGTTVSHVSDVVGP-----------------------------------------------------------ARILALNASYFLKAG

Query:  GHFVISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA
        GHFVISIKANCIDSTVPAEAVFASEVNKLKAD FKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA
Subjt:  GHFVISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA

A0A6J1G280 probable mediator of RNA polymerase II transcription subunit 36b5.8e-9976.69Show/hide
Query:  MQSRGGGRGGGRGRGGGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWI
        M SRGGGRGGGRGRGGGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTK+EYRVWNPFRSKLAAAVLGGVDDIWI
Subjt:  MQSRGGGRGGGRGRGGGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWI

Query:  KPGARVLYLGAASGTTVSHVSDVVGP-----------------------------------------------------------ARILALNASYFLKAG
        KPGARVLYLGAASGTTVSHVSDVVGP                                                           ARILALNASYFLKAG
Subjt:  KPGARVLYLGAASGTTVSHVSDVVGP-----------------------------------------------------------ARILALNASYFLKAG

Query:  GHFVISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA
        GHFVISIKANCIDSTVPAEAVFASEVNKLKAD FKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA
Subjt:  GHFVISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA

A0A6J1HX74 probable mediator of RNA polymerase II transcription subunit 36b5.8e-9976.69Show/hide
Query:  MQSRGGGRGGGRGRGGGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWI
        M SRGGGRGGGRGRGGGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTK+EYRVWNPFRSKLAAAVLGGVDDIWI
Subjt:  MQSRGGGRGGGRGRGGGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWI

Query:  KPGARVLYLGAASGTTVSHVSDVVGP-----------------------------------------------------------ARILALNASYFLKAG
        KPGARVLYLGAASGTTVSHVSDVVGP                                                           ARILALNASYFLKAG
Subjt:  KPGARVLYLGAASGTTVSHVSDVVGP-----------------------------------------------------------ARILALNASYFLKAG

Query:  GHFVISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA
        GHFVISIKANCIDSTVPAEAVFASEVNKLKAD FKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA
Subjt:  GHFVISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA

A0A6J1JA27 probable mediator of RNA polymerase II transcription subunit 36b1.9e-9776.89Show/hide
Query:  SRGGGRGGGRGRGGGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWIKP
        SRGGGRGGGRGRGGGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWIKP
Subjt:  SRGGGRGGGRGRGGGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWIKP

Query:  GARVLYLGAASGTTVSHVSDVVGP-----------------------------------------------------------ARILALNASYFLKAGGH
        GARVLYLGAASGTTVSHVSDVVGP                                                           ARILALNASYFLKAGGH
Subjt:  GARVLYLGAASGTTVSHVSDVVGP-----------------------------------------------------------ARILALNASYFLKAGGH

Query:  FVISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA
        FVISIKANCIDSTVPAEAVFASEVNKLKAD FKPTEQVTLEPFERDHACVVGIYRAPKKQK AA
Subjt:  FVISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA

SwissProt top hitse value%identityAlignment
P22509 rRNA 2'-O-methyltransferase fibrillarin7.9e-6957.58Show/hide
Query:  RGGG--RGGGRGRGGGRGG--GMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIW
        RGGG   GGGRGRGGGRGG  G + G  V+VEPHRHEG+FI +GKEDALVTKN+V GESVY EKR+S+ +E   K+EYR WNPFRSKLAAA+LGGVD I 
Subjt:  RGGG--RGGGRGRGGGRGG--GMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIW

Query:  IKPGARVLYLGAASGTTVSHVSDVVGP-----------------------------------------------------------ARILALNASYFLKA
        IKPGA+VLYLGAASGTTVSHVSD+VGP                                                            RI+ALNA  FL+ 
Subjt:  IKPGARVLYLGAASGTTVSHVSDVVGP-----------------------------------------------------------ARILALNASYFLKA

Query:  GGHFVISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACVVGIYRAPKKQK
        GGHFVISIKANCIDST  AEAVFASEV K++ +N KP EQ+TLEP+ERDHA VVG+YR P K K
Subjt:  GGHFVISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACVVGIYRAPKKQK

P35550 rRNA 2'-O-methyltransferase fibrillarin2.3e-6856.93Show/hide
Query:  GGGRGGG------RGRGGGRGG--GMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVD
        GGGRGGG      RGRGGGRGG  G + G  V+VEPHRHEG+FI +GKEDALVTKN+V GESVY EKR+S+ +E   K+EYR WNPFRSKLAAA+LGGVD
Subjt:  GGGRGGG------RGRGGGRGG--GMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVD

Query:  DIWIKPGARVLYLGAASGTTVSHVSDVVGP-----------------------------------------------------------ARILALNASYF
         I IKPGA+VLYLGAASGTTVSHVSD+VGP                                                            RI+ALNA  F
Subjt:  DIWIKPGARVLYLGAASGTTVSHVSDVVGP-----------------------------------------------------------ARILALNASYF

Query:  LKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACVVGIYRAPKKQK
        L+ GGHFVISIKANCIDST  AEAVFASEV K++ +N KP EQ+TLEP+ERDHA VVG+YR P K K
Subjt:  LKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACVVGIYRAPKKQK

Q8I1F4 rRNA 2'-O-methyltransferase fibrillarin2.3e-6857.47Show/hide
Query:  GGGRGGGRGRGGGRG---GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWIK
        GGGRGGG   GGGRG   GG KGG  V +EPHRHEG+FIA+GKEDALVT+N V G  VY EKRISV+N +G K+EYRVWNPFRSKLAAAVLGGV+ I + 
Subjt:  GGGRGGGRGRGGGRG---GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWIK

Query:  PGARVLYLGAASGTTVSHVSDVVGP-----------------------------------------------------------ARILALNASYFLKAGG
        PG++VLYLGAASGTTVSHVSDVVGP                                                            RI+ALNA +FLK GG
Subjt:  PGARVLYLGAASGTTVSHVSDVVGP-----------------------------------------------------------ARILALNASYFLKAGG

Query:  HFVISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACVVGIYRAPKKQ
        HFVISIKA+CIDST   EAVFASEV K++AD  KP EQ+TLEP+ERDHA VVG+YR P KQ
Subjt:  HFVISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACVVGIYRAPKKQ

Q94AH9 rRNA 2'-O-methyltransferase fibrillarin 25.6e-8364.16Show/hide
Query:  RGGGRG----GGRGRG---------GGRG----GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSK
        RGGGRG    GGRGRG         GGRG    GGMKGGSKV+VEPHRH G+FIAKGKEDALVTKN+V GE+VYNEKRISVQNEDGTK EYRVWNPFRSK
Subjt:  RGGGRG----GGRGRG---------GGRG----GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSK

Query:  LAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGP-----------------------------------------------------------A
        LAAA+LGGVD+IWIKPGA+VLYLGAASGTTVSHVSD+VGP                                                           A
Subjt:  LAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGP-----------------------------------------------------------A

Query:  RILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACVVGIYRAPKKQKPA
        RILALNASYFLK+GGHFVISIKANCIDSTVPAEAVF +EV KL+ + FKP EQVTLEPFERDHACVVG YR PKK K A
Subjt:  RILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACVVGIYRAPKKQKPA

Q9FEF8 rRNA 2'-O-methyltransferase fibrillarin 11.9e-8366.16Show/hide
Query:  RGGGRGGGRGRGGGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWIKPG
        RG GRG  RGRGG   GGMKGGSKV+VEPHRH G+FIAKGKEDALVTKN+V GE+VYNEKRISVQNEDGTKVEYRVWNPFRSKLAAA+LGGVD+IWIKPG
Subjt:  RGGGRGGGRGRGGGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWIKPG

Query:  ARVLYLGAASGTTVSHVSDVVGP-----------------------------------------------------------ARILALNASYFLKAGGHF
        A+VLYLGAASGTTVSHVSD+VGP                                                           ARILALNAS+FLK GGHF
Subjt:  ARVLYLGAASGTTVSHVSDVVGP-----------------------------------------------------------ARILALNASYFLKAGGHF

Query:  VISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA
        VISIKANCIDSTV AEAVF SEV KL+ + FKP EQVTLEPFERDHACVVG YR PKKQK  A
Subjt:  VISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA

Arabidopsis top hitse value%identityAlignment
AT4G25630.1 fibrillarin 24.0e-8464.16Show/hide
Query:  RGGGRG----GGRGRG---------GGRG----GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSK
        RGGGRG    GGRGRG         GGRG    GGMKGGSKV+VEPHRH G+FIAKGKEDALVTKN+V GE+VYNEKRISVQNEDGTK EYRVWNPFRSK
Subjt:  RGGGRG----GGRGRG---------GGRG----GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSK

Query:  LAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGP-----------------------------------------------------------A
        LAAA+LGGVD+IWIKPGA+VLYLGAASGTTVSHVSD+VGP                                                           A
Subjt:  LAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGP-----------------------------------------------------------A

Query:  RILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACVVGIYRAPKKQKPA
        RILALNASYFLK+GGHFVISIKANCIDSTVPAEAVF +EV KL+ + FKP EQVTLEPFERDHACVVG YR PKK K A
Subjt:  RILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACVVGIYRAPKKQKPA

AT5G52470.1 fibrillarin 11.4e-8466.16Show/hide
Query:  RGGGRGGGRGRGGGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWIKPG
        RG GRG  RGRGG   GGMKGGSKV+VEPHRH G+FIAKGKEDALVTKN+V GE+VYNEKRISVQNEDGTKVEYRVWNPFRSKLAAA+LGGVD+IWIKPG
Subjt:  RGGGRGGGRGRGGGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWIKPG

Query:  ARVLYLGAASGTTVSHVSDVVGP-----------------------------------------------------------ARILALNASYFLKAGGHF
        A+VLYLGAASGTTVSHVSD+VGP                                                           ARILALNAS+FLK GGHF
Subjt:  ARVLYLGAASGTTVSHVSDVVGP-----------------------------------------------------------ARILALNASYFLKAGGHF

Query:  VISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA
        VISIKANCIDSTV AEAVF SEV KL+ + FKP EQVTLEPFERDHACVVG YR PKKQK  A
Subjt:  VISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA

AT5G52470.2 fibrillarin 11.2e-5386.99Show/hide
Query:  RGGGRGGGRGRGGGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWIKPG
        RG GRG  RGRGG   GGMKGGSKV+VEPHRH G+FIAKGKEDALVTKN+V GE+VYNEKRISVQNEDGTKVEYRVWNPFRSKLAAA+LGGVD+IWIKPG
Subjt:  RGGGRGGGRGRGGGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWIKPG

Query:  ARVLYLGAASGTTVSHVSDVVGP
        A+VLYLGAASGTTVSHVSD+VGP
Subjt:  ARVLYLGAASGTTVSHVSDVVGP

AT5G52490.1 Fibrillarin family protein9.5e-6252.45Show/hide
Query:  RGGGRGG--GRGRGGGR-----GGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVD
        RG GRGG  GRGRG GR      GG+KGGSKV+V PHRH G+F+AK K DALVTKN+V GE +YNEKRI VQNED + VEYRVWNP RSKLA A+  GVD
Subjt:  RGGGRGG--GRGRGGGR-----GGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVD

Query:  DIWIKPGARVLYLGAASGTTVSHVSDVVGP-----------------------------------------------------------ARILALNASYF
        +IWIKPG +VLYLGA+SG TVSHVSD+VGP                                                           A IL+LNASYF
Subjt:  DIWIKPGARVLYLGAASGTTVSHVSDVVGP-----------------------------------------------------------ARILALNASYF

Query:  LKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACVVGIYRAPKK
        LK+GGHF+ISIKAN IDST+ AE V+  EV KL+ +  +PTE + L+  E  HACV G YR P+K
Subjt:  LKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACVVGIYRAPKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAAGCCGCGGTGGTGGTCGCGGAGGTGGAAGAGGTCGCGGTGGAGGAAGAGGAGGTGGTATGAAAGGTGGAAGCAAAGTCGTCGTTGAACCCCACAGACACGAAGG
TATTTTCATTGCCAAGGGTAAAGAAGATGCTCTTGTCACTAAGAACATGGTCTCTGGGGAATCTGTCTACAACGAGAAGAGAATATCCGTACAGAATGAAGATGGAACAA
AAGTTGAGTACAGAGTTTGGAACCCATTCAGATCTAAGTTGGCTGCAGCCGTTCTTGGTGGTGTTGATGACATATGGATTAAACCTGGTGCTCGAGTGTTGTATCTTGGT
GCTGCTTCAGGAACAACTGTATCACATGTCTCAGATGTTGTTGGCCCAGCAAGAATTTTGGCACTTAATGCATCATACTTTCTCAAAGCCGGTGGCCATTTTGTTATATC
AATCAAGGCCAACTGCATCGACTCAACTGTTCCTGCAGAGGCAGTGTTTGCAAGTGAGGTTAATAAGCTAAAAGCAGATAATTTCAAACCTACTGAGCAAGTGACTCTCG
AACCATTCGAGCGGGACCATGCTTGTGTTGTTGGTATTTATCGGGCGCCGAAGAAACAGAAGCCAGCTGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAAAGCCGCGGTGGTGGTCGCGGAGGTGGAAGAGGTCGCGGTGGAGGAAGAGGAGGTGGTATGAAAGGTGGAAGCAAAGTCGTCGTTGAACCCCACAGACACGAAGG
TATTTTCATTGCCAAGGGTAAAGAAGATGCTCTTGTCACTAAGAACATGGTCTCTGGGGAATCTGTCTACAACGAGAAGAGAATATCCGTACAGAATGAAGATGGAACAA
AAGTTGAGTACAGAGTTTGGAACCCATTCAGATCTAAGTTGGCTGCAGCCGTTCTTGGTGGTGTTGATGACATATGGATTAAACCTGGTGCTCGAGTGTTGTATCTTGGT
GCTGCTTCAGGAACAACTGTATCACATGTCTCAGATGTTGTTGGCCCAGCAAGAATTTTGGCACTTAATGCATCATACTTTCTCAAAGCCGGTGGCCATTTTGTTATATC
AATCAAGGCCAACTGCATCGACTCAACTGTTCCTGCAGAGGCAGTGTTTGCAAGTGAGGTTAATAAGCTAAAAGCAGATAATTTCAAACCTACTGAGCAAGTGACTCTCG
AACCATTCGAGCGGGACCATGCTTGTGTTGTTGGTATTTATCGGGCGCCGAAGAAACAGAAGCCAGCTGCTTAG
Protein sequenceShow/hide protein sequence
MQSRGGGRGGGRGRGGGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLG
AASGTTVSHVSDVVGPARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADNFKPTEQVTLEPFERDHACVVGIYRAPKKQKPAA