CuGenDBv2

Gene ID	Spg002408
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	importin-4-like
Genome location	scaffold6:5348135..5352506
RNA-Seq Expression	Spg002408
Synteny	Spg002408
Gene Ontology terms	GO:0006606 - protein import into nucleus (biological process) GO:0005634 - nucleus (cellular component) GO:0005737 - cytoplasm (cellular component) GO:0008139 - nuclear localization sequence binding (molecular function) GO:0031267 - small GTPase binding (molecular function) GO:0061608 - nuclear import signal receptor activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0039026.1 importin-4 isoform X1 [Cucumis melo var. makuwa]

6.8e-14

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Query:  SLIPELVNIFAHIVASPIETSEVKAQDVRALSHLLSLYGQQMQPLLSNLP
        SL+PELVNIFAH+VASPIETSEVKAQ  RA SHLLSLYGQQMQPLLS+LP
Subjt:  SLIPELVNIFAHIVASPIETSEVKAQDVRALSHLLSLYGQQMQPLLSNLP

TYJ99765.1 importin-4 isoform X1 [Cucumis melo var. makuwa]

6.8e-14

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Query:  SLIPELVNIFAHIVASPIETSEVKAQDVRALSHLLSLYGQQMQPLLSNLP
        SL+PELVNIFAH+VASPIETSEVKAQ  RA SHLLSLYGQQMQPLLS+LP
Subjt:  SLIPELVNIFAHIVASPIETSEVKAQDVRALSHLLSLYGQQMQPLLSNLP

XP_004146264.1 importin-4 [Cucumis sativus]

1.8e-14

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Query:  SLIPELVNIFAHIVASPIETSEVKAQDVRALSHLLSLYGQQMQPLLSNLP
        SL+PELVNIFAH+VASPIETSEVKAQ  RA SHLLSLYGQQMQPLLSNLP
Subjt:  SLIPELVNIFAHIVASPIETSEVKAQDVRALSHLLSLYGQQMQPLLSNLP

XP_008456074.1 PREDICTED: importin-4 isoform X1 [Cucumis melo]

6.8e-14

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Query:  SLIPELVNIFAHIVASPIETSEVKAQDVRALSHLLSLYGQQMQPLLSNLP
        SL+PELVNIFAH+VASPIETSEVKAQ  RA SHLLSLYGQQMQPLLS+LP
Subjt:  SLIPELVNIFAHIVASPIETSEVKAQDVRALSHLLSLYGQQMQPLLSNLP

XP_038897499.1 importin-4 [Benincasa hispida]

1.8e-14

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Query:  SLIPELVNIFAHIVASPIETSEVKAQDVRALSHLLSLYGQQMQPLLSNLP
        SL+PELVNIFAH+VASPIETSEVKAQ  RA SHLLSLYGQQMQPLLSNLP
Subjt:  SLIPELVNIFAHIVASPIETSEVKAQDVRALSHLLSLYGQQMQPLLSNLP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L6K4 Importin N-terminal domain-containing protein

8.7e-15

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Query:  SLIPELVNIFAHIVASPIETSEVKAQDVRALSHLLSLYGQQMQPLLSNLP
        SL+PELVNIFAH+VASPIETSEVKAQ  RA SHLLSLYGQQMQPLLSNLP
Subjt:  SLIPELVNIFAHIVASPIETSEVKAQDVRALSHLLSLYGQQMQPLLSNLP

A0A1S3C1Y9 importin-4 isoform X1

3.3e-14

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Query:  SLIPELVNIFAHIVASPIETSEVKAQDVRALSHLLSLYGQQMQPLLSNLP
        SL+PELVNIFAH+VASPIETSEVKAQ  RA SHLLSLYGQQMQPLLS+LP
Subjt:  SLIPELVNIFAHIVASPIETSEVKAQDVRALSHLLSLYGQQMQPLLSNLP

A0A5A7TAG2 Importin-4 isoform X1

3.3e-14

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Query:  SLIPELVNIFAHIVASPIETSEVKAQDVRALSHLLSLYGQQMQPLLSNLP
        SL+PELVNIFAH+VASPIETSEVKAQ  RA SHLLSLYGQQMQPLLS+LP
Subjt:  SLIPELVNIFAHIVASPIETSEVKAQDVRALSHLLSLYGQQMQPLLSNLP

A0A5D3BN77 Importin-4 isoform X1

3.3e-14

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Query:  SLIPELVNIFAHIVASPIETSEVKAQDVRALSHLLSLYGQQMQPLLSNLP
        SL+PELVNIFAH+VASPIETSEVKAQ  RA SHLLSLYGQQMQPLLS+LP
Subjt:  SLIPELVNIFAHIVASPIETSEVKAQDVRALSHLLSLYGQQMQPLLSNLP

A0A6J1IUE7 importin-4-like

5.6e-14

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Query:  SLIPELVNIFAHIVASPIETSEVKAQDVRALSHLLSLYGQQMQPLLSNLP
        SL+PELVNIFAH+VASPIETSEVKAQ  RA SHLLS+YGQQMQPLLS+LP
Subjt:  SLIPELVNIFAHIVASPIETSEVKAQDVRALSHLLSLYGQQMQPLLSNLP

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G27640.1 ARM repeat superfamily protein

2.4e-09

47.46

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Query:  MKQGNPSL---IPELVNIFAHIVASPIETSEVKAQDVRALSHLLSLYGQQMQPLLSNLP
        +   NP +   +PELV IF  ++ SP+E  EVKA   R  SHL+S+YG Q+QP++S+LP
Subjt:  MKQGNPSL---IPELVNIFAHIVASPIETSEVKAQDVRALSHLLSLYGQQMQPLLSNLP

Sequences

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CDS sequence

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ATGACACTTGAAAAGAAAACATTACAACATGGGAAGAAGCTCGATCGCCCGAATCAAACCTTAATGCCTAACACAATGTTTAACCAAGTAAGTCAGGGAGAGATGAAACA
GGGAAATCCTTCTTTGATTCCAGAGTTGGTCAATATCTTTGCTCATATTGTGGCATCTCCCATCGAAACGTCAGAAGTTAAAGCTCAAGATGTCCGAGCTTTATCGCATC
TACTTTCACTCTATGGCCAACAAATGCAACCACTTTTGAGCAATCTCCCATCTTAG

mRNA sequence

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Protein sequence

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MTLEKKTLQHGKKLDRPNQTLMPNTMFNQVSQGEMKQGNPSLIPELVNIFAHIVASPIETSEVKAQDVRALSHLLSLYGQQMQPLLSNLPS

Spg002408 (gene) of Sponge gourd (cylindrica) v1 genome