; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg002411 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg002411
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptioncysteine-rich and transmembrane domain-containing protein A-like
Genome locationscaffold6:4146817..4148706
RNA-Seq ExpressionSpg002411
SyntenySpg002411
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR044850 - Cysteine-rich and transmembrane domain-containing protein WIH1/2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK29454.1 cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo var. makuwa]5.6e-3297.37Show/hide
Query:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPQQQQSSGPGCLEG
        MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQY QPPP QQQSSGPGCLEG
Subjt:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPQQQQSSGPGCLEG

XP_008454408.1 PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo]1.7e-3397.44Show/hide
Query:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPQQQQSSGPGCLEGCL
        MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQY QPPP QQQSSGPGCLEGCL
Subjt:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPQQQQSSGPGCLEGCL

XP_011652909.1 cysteine-rich and transmembrane domain-containing protein WIH2 [Cucumis sativus]7.1e-3597.44Show/hide
Query:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPQQQQSSGPGCLEGCL
        MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQY QPPPQQQ SSGPGCLEGCL
Subjt:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPQQQQSSGPGCLEGCL

XP_022149329.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Momordica charantia]1.8e-3090.36Show/hide
Query:  MSYYNQGQPPIGVPPPQGYPPEGYPKDA-----YPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPQQQQSSGPGCLEGCL
        MSYYNQGQPPIGVPPPQGYPPEGYPKDA     YPP GYPPQGYPPPGAYP QGYPPPYAPQYGQPPP QQQSSGPGCLEGCL
Subjt:  MSYYNQGQPPIGVPPPQGYPPEGYPKDA-----YPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPQQQQSSGPGCLEGCL

XP_038905303.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Benincasa hispida]3.0e-3394.87Show/hide
Query:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPQQQQSSGPGCLEGCL
        MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPP GYPPPYAPQY Q PPQQQ SSGPGCLEGCL
Subjt:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPQQQQSSGPGCLEGCL

TrEMBL top hitse value%identityAlignment
A0A0A0KWC5 Uncharacterized protein3.4e-3597.44Show/hide
Query:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPQQQQSSGPGCLEGCL
        MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQY QPPPQQQ SSGPGCLEGCL
Subjt:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPQQQQSSGPGCLEGCL

A0A1S3BZB4 cysteine-rich and transmembrane domain-containing protein A-like8.4e-3497.44Show/hide
Query:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPQQQQSSGPGCLEGCL
        MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQY QPPP QQQSSGPGCLEGCL
Subjt:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPQQQQSSGPGCLEGCL

A0A5D3E0V1 Cysteine-rich and transmembrane domain-containing protein A-like2.7e-3297.37Show/hide
Query:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPQQQQSSGPGCLEG
        MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQY QPPP QQQSSGPGCLEG
Subjt:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPQQQQSSGPGCLEG

A0A6J1D5E9 cysteine-rich and transmembrane domain-containing protein WIH2-like8.7e-3190.36Show/hide
Query:  MSYYNQGQPPIGVPPPQGYPPEGYPKDA-----YPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPQQQQSSGPGCLEGCL
        MSYYNQGQPPIGVPPPQGYPPEGYPKDA     YPP GYPPQGYPPPGAYP QGYPPPYAPQYGQPPP QQQSSGPGCLEGCL
Subjt:  MSYYNQGQPPIGVPPPQGYPPEGYPKDA-----YPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPQQQQSSGPGCLEGCL

A0A6J1J7A9 cysteine-rich and transmembrane domain-containing protein WIH2-like2.5e-3081.82Show/hide
Query:  MSYYNQGQPPIGVPPPQGYPPEGYPKDA----------YPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPQQQQSSGPGCLEGCL
        MSYYNQGQ P+GVPPPQGYPPEGYPKDA          YPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPP QQQSS  GCL+GCL
Subjt:  MSYYNQGQPPIGVPPPQGYPPEGYPKDA----------YPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPQQQQSSGPGCLEGCL

SwissProt top hitse value%identityAlignment
P31356 Rhodopsin2.2e-0763.33Show/hide
Query:  MSYYNQGQPPIG-VPPPQGYPPEGYPKDAYPPPGYPPQGYPPP--GAYPPQGYPPPYAPQ
        M       PP G  PPPQGYPP+GYP   YPP GYPPQGYPPP  GA PPQG PP   PQ
Subjt:  MSYYNQGQPPIG-VPPPQGYPPEGYPKDAYPPPGYPPQGYPPP--GAYPPQGYPPPYAPQ

Q17094 Rhodopsin (Fragment)2.5e-0657.75Show/hide
Query:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGY-PPPYAPQYGQPPPQQQQSSG
        M    Q QP     PPQGYPP+GYP    PP GYPPQGYPP G YPPQGY PPP  P    PPPQ     G
Subjt:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGY-PPPYAPQYGQPPPQQQQSSG

Q8LCL8 Cysteine-rich and transmembrane domain-containing protein B5.1e-1257.47Show/hide
Query:  NQGQPPIGVPPPQGYPPEGYPKDAYPPPG--YPPQGYPPP-----GAYPPQGYPPPYAPQYGQP----PPQQQQSS--GPGCLEGCL
        +Q  P +GVPP   YP EG PKDAYPPPG  YP QGYPPP       YPPQGYPP   P+ G P    PPQQQQ     PG LEGC+
Subjt:  NQGQPPIGVPPPQGYPPEGYPKDAYPPPG--YPPQGYPPP-----GAYPPQGYPPPYAPQYGQP----PPQQQQSS--GPGCLEGCL

Q8S8M0 Cysteine-rich and transmembrane domain-containing protein WIH22.9e-2371.26Show/hide
Query:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYP---------PPGAYPPQGYPPPYAPQYGQPPPQQQQSSGPGCLEGCL
        MS YN  QPP+GVPPPQGYPPEGYPKDAYPP GYPPQGYP         P   YP QGYPPPYAPQY  PP  QQQ S PG LEGCL
Subjt:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYP---------PPGAYPPQGYPPPYAPQYGQPPPQQQQSSGPGCLEGCL

Q9FJW3 Cysteine-rich and transmembrane domain-containing protein WIH11.8e-1261.54Show/hide
Query:  YNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPG---AYPPQGYPPPYAPQYGQPPPQQQQSSGPGCLEGCL
        Y+Q Q P+G PPPQGYP    PKD YPP GYPP GYPPPG    YP QGYPP   PQY Q P Q+Q +   G LEGCL
Subjt:  YNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPG---AYPPQGYPPPYAPQYGQPPPQQQQSSGPGCLEGCL

Arabidopsis top hitse value%identityAlignment
AT2G41420.1 proline-rich family protein2.1e-2471.26Show/hide
Query:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYP---------PPGAYPPQGYPPPYAPQYGQPPPQQQQSSGPGCLEGCL
        MS YN  QPP+GVPPPQGYPPEGYPKDAYPP GYPPQGYP         P   YP QGYPPPYAPQY  PP  QQQ S PG LEGCL
Subjt:  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYP---------PPGAYPPQGYPPPYAPQYGQPPPQQQQSSGPGCLEGCL

AT3G49845.1 unknown protein1.4e-0944.04Show/hide
Query:  YNQGQPPIGVPPPQGYPP-EGYPKDAYPPP-----------GYPPQGYPPP-----GAYPPQGYPPPYAPQ---------------YGQPPP--QQQQSS
        Y   Q P+  PPPQGYPP EGYP   YPPP           GYPP GYPPP       YP QGYPPP  PQ               YGQ PP  ++ +  
Subjt:  YNQGQPPIGVPPPQGYPP-EGYPKDAYPPP-----------GYPPQGYPPP-----GAYPPQGYPPPYAPQ---------------YGQPPP--QQQQSS

Query:  GPGCLEGCL
          G +EGCL
Subjt:  GPGCLEGCL

AT5G45350.1 proline-rich family protein2.7e-0863.93Show/hide
Query:  GQPPIGVPPPQGYPPEGYPKDAYPPP--GYPPQGYPPPGAYPPQ--GYPPPYAPQYGQPPP
        G PP G PPP  YPP GYP+  YPPP   YPP GY PPGAYPP   GYPP  AP YG  PP
Subjt:  GQPPIGVPPPQGYPPEGYPKDAYPPP--GYPPQGYPPPGAYPPQ--GYPPPYAPQYGQPPP

AT5G45350.2 proline-rich family protein2.7e-0863.93Show/hide
Query:  GQPPIGVPPPQGYPPEGYPKDAYPPP--GYPPQGYPPPGAYPPQ--GYPPPYAPQYGQPPP
        G PP G PPP  YPP GYP+  YPPP   YPP GY PPGAYPP   GYPP  AP YG  PP
Subjt:  GQPPIGVPPPQGYPPEGYPKDAYPPP--GYPPQGYPPPGAYPPQ--GYPPPYAPQYGQPPP

AT5G67600.1 unknown protein1.2e-1361.54Show/hide
Query:  YNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPG---AYPPQGYPPPYAPQYGQPPPQQQQSSGPGCLEGCL
        Y+Q Q P+G PPPQGYP    PKD YPP GYPP GYPPPG    YP QGYPP   PQY Q P Q+Q +   G LEGCL
Subjt:  YNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPG---AYPPQGYPPPYAPQYGQPPPQQQQSSGPGCLEGCL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTATTATAATCAAGGTCAGCCTCCGATTGGGGTGCCTCCGCCTCAAGGTTATCCGCCGGAAGGTTATCCGAAGGATGCTTATCCGCCGCCGGGATATCCGCCGCA
AGGATATCCTCCTCCCGGTGCTTATCCGCCGCAGGGATATCCTCCGCCTTACGCTCCTCAGTACGGTCAGCCTCCTCCCCAACAGCAGCAAAGTAGCGGCCCCGGTTGCT
TGGAAGGCTGTTTGATTTGGGACTCTGCAGTTTGGCTGCGCTGTGCTGTTGCTGTCTTCTCGACGCCTGCTTTTAAAGAGAATCCATTTGCAATGTGCTGTGCTTCAAAT
TCAAGGGCAATTTCTCAGAGAACTTTTCCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTATTATAATCAAGGTCAGCCTCCGATTGGGGTGCCTCCGCCTCAAGGTTATCCGCCGGAAGGTTATCCGAAGGATGCTTATCCGCCGCCGGGATATCCGCCGCA
AGGATATCCTCCTCCCGGTGCTTATCCGCCGCAGGGATATCCTCCGCCTTACGCTCCTCAGTACGGTCAGCCTCCTCCCCAACAGCAGCAAAGTAGCGGCCCCGGTTGCT
TGGAAGGCTGTTTGATTTGGGACTCTGCAGTTTGGCTGCGCTGTGCTGTTGCTGTCTTCTCGACGCCTGCTTTTAAAGAGAATCCATTTGCAATGTGCTGTGCTTCAAAT
TCAAGGGCAATTTCTCAGAGAACTTTTCCCTGA
Protein sequenceShow/hide protein sequence
MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPQQQQSSGPGCLEGCLIWDSAVWLRCAVAVFSTPAFKENPFAMCCASN
SRAISQRTFP