CuGenDBv2

Gene ID	Spg002451
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	protein PLASTID TRANSCRIPTIONALLY ACTIVE 7
Genome location	scaffold6:551122..553297
RNA-Seq Expression	Spg002451
Synteny	Spg002451
Gene Ontology terms	GO:0042793 - plastid transcription (biological process) GO:0000427 - plastid-encoded plastid RNA polymerase complex (cellular component) GO:0003723 - RNA binding (molecular function)
InterPro domains	IPR038958 - Protein plastid transcriptionally active 7

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6576638.1 Protein PLASTID TRANSCRIPTIONALLY ACTIVE 7, partial [Cucurbita argyrosperma subsp. sororia]

3.6e-78

83.78

Show/hide

Query:  MTTPIPTLSFASPLLFQNTSNFAHLGVFFQLLQRIEVRAGISHGFNFPPRLQVVARKQRSGEGGGRRVWRRRKLTKKDDMSHYKMDRIPFLEEQVRKVKE
        MTTPIPTLSFASP                    RI+ RAGISHGFNFPPRLQV ARKQR GEG GRRVWRRRKLTKKDDMS +KMDRIPFLEEQVRKVKE
Subjt:  MTTPIPTLSFASPLLFQNTSNFAHLGVFFQLLQRIEVRAGISHGFNFPPRLQVVARKQRSGEGGGRRVWRRRKLTKKDDMSHYKMDRIPFLEEQVRKVKE

Query:  QGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT
        QGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVE+NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAE+DPFKPGPHYLK+EFT
Subjt:  QGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT

KAG7014690.1 Protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 [Cucurbita argyrosperma subsp. argyrosperma]

1.5e-79

84.86

Show/hide

Query:  MTTPIPTLSFASPLLFQNTSNFAHLGVFFQLLQRIEVRAGISHGFNFPPRLQVVARKQRSGEGGGRRVWRRRKLTKKDDMSHYKMDRIPFLEEQVRKVKE
        MTTPIPTLSFASP                 L QRI+ RAGISHGFNFPPRLQV ARKQR GEG GRRVWRRRKLTKKDDMS +KMDRIPFLEEQVRKVKE
Subjt:  MTTPIPTLSFASPLLFQNTSNFAHLGVFFQLLQRIEVRAGISHGFNFPPRLQVVARKQRSGEGGGRRVWRRRKLTKKDDMSHYKMDRIPFLEEQVRKVKE

Query:  QGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT
        QGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVE+NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAE+DPFKPGPHYLK+EFT
Subjt:  QGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT

XP_022923077.1 protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X1 [Cucurbita moschata]

2.1e-78

83.78

Show/hide

Query:  MTTPIPTLSFASPLLFQNTSNFAHLGVFFQLLQRIEVRAGISHGFNFPPRLQVVARKQRSGEGGGRRVWRRRKLTKKDDMSHYKMDRIPFLEEQVRKVKE
        MTTPIPTLSFASP                 L QRI+ RAG+SHGFNFP RLQV ARKQR GEG GRRVWRRRKLTKKDDMS +KMDRIPFLEEQVRKVKE
Subjt:  MTTPIPTLSFASPLLFQNTSNFAHLGVFFQLLQRIEVRAGISHGFNFPPRLQVVARKQRSGEGGGRRVWRRRKLTKKDDMSHYKMDRIPFLEEQVRKVKE

Query:  QGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT
        QGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVE+NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAE+DPFKPGPHYLK+EFT
Subjt:  QGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT

XP_022984516.1 protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X1 [Cucurbita maxima]

1.2e-78

83.78

Show/hide

Query:  MTTPIPTLSFASPLLFQNTSNFAHLGVFFQLLQRIEVRAGISHGFNFPPRLQVVARKQRSGEGGGRRVWRRRKLTKKDDMSHYKMDRIPFLEEQVRKVKE
        MT+PIPTLSFASP                 L QRI+ RAGISHGFNFPPRLQV ARKQR GEG GRRVWRRRKLTKKD+MS +KMDRIPFLEEQVRKVKE
Subjt:  MTTPIPTLSFASPLLFQNTSNFAHLGVFFQLLQRIEVRAGISHGFNFPPRLQVVARKQRSGEGGGRRVWRRRKLTKKDDMSHYKMDRIPFLEEQVRKVKE

Query:  QGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT
        QGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVE+NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAE+DPFKPGPHYLK+EFT
Subjt:  QGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT

XP_023553427.1 protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X1 [Cucurbita pepo subsp. pepo]

2.1e-78

83.24

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Query:  MTTPIPTLSFASPLLFQNTSNFAHLGVFFQLLQRIEVRAGISHGFNFPPRLQVVARKQRSGEGGGRRVWRRRKLTKKDDMSHYKMDRIPFLEEQVRKVKE
        MTTPIPTLSFASP                 L QRI+ RAGISHGFNFPPRLQ+ ARKQR GEG GRRVWRRRKLTKKD+MS +KMDRIPFLEEQVRKVKE
Subjt:  MTTPIPTLSFASPLLFQNTSNFAHLGVFFQLLQRIEVRAGISHGFNFPPRLQVVARKQRSGEGGGRRVWRRRKLTKKDDMSHYKMDRIPFLEEQVRKVKE

Query:  QGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT
        QGKLITMDIERLLLSEDNRFDFVNEVAAEAK+YVE+NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAE+DPFKPGPHYLK+EFT
Subjt:  QGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CJC0 protein PLASTID TRANSCRIPTIONALLY ACTIVE 7

1.6e-76

82.61

Show/hide

Query:  MTTPIPTLSFASPLLFQNTSNFAHLGVFFQLLQRIEVRAGISHGFNFPPRLQVVARKQRSGEGGGRRVWRRRKLTKKDDMSHYKMDRIPFLEEQVRKVKE
        M+TPIPTLSF S                   + RIE RAGISH FNFPPR +VVARKQR  EGGGRRVWRRRKL KKDDMSHYKMDRIPFLEEQVRKVKE
Subjt:  MTTPIPTLSFASPLLFQNTSNFAHLGVFFQLLQRIEVRAGISHGFNFPPRLQVVARKQRSGEGGGRRVWRRRKLTKKDDMSHYKMDRIPFLEEQVRKVKE

Query:  QGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEF
        QGKL+TMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAE+DPFKPGPHYLKEEF
Subjt:  QGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEF

A0A6J1E559 protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X1

1.0e-78

83.78

Show/hide

Query:  MTTPIPTLSFASPLLFQNTSNFAHLGVFFQLLQRIEVRAGISHGFNFPPRLQVVARKQRSGEGGGRRVWRRRKLTKKDDMSHYKMDRIPFLEEQVRKVKE
        MTTPIPTLSFASP                 L QRI+ RAG+SHGFNFP RLQV ARKQR GEG GRRVWRRRKLTKKDDMS +KMDRIPFLEEQVRKVKE
Subjt:  MTTPIPTLSFASPLLFQNTSNFAHLGVFFQLLQRIEVRAGISHGFNFPPRLQVVARKQRSGEGGGRRVWRRRKLTKKDDMSHYKMDRIPFLEEQVRKVKE

Query:  QGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT
        QGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVE+NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAE+DPFKPGPHYLK+EFT
Subjt:  QGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT

A0A6J1E8L1 protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X2

2.5e-77

82.7

Show/hide

Query:  MTTPIPTLSFASPLLFQNTSNFAHLGVFFQLLQRIEVRAGISHGFNFPPRLQVVARKQRSGEGGGRRVWRRRKLTKKDDMSHYKMDRIPFLEEQVRKVKE
        MTTPIPTLSFASP                    RI+ RAG+SHGFNFP RLQV ARKQR GEG GRRVWRRRKLTKKDDMS +KMDRIPFLEEQVRKVKE
Subjt:  MTTPIPTLSFASPLLFQNTSNFAHLGVFFQLLQRIEVRAGISHGFNFPPRLQVVARKQRSGEGGGRRVWRRRKLTKKDDMSHYKMDRIPFLEEQVRKVKE

Query:  QGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT
        QGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVE+NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAE+DPFKPGPHYLK+EFT
Subjt:  QGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT

A0A6J1J2D6 protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X2

1.5e-77

82.7

Show/hide

Query:  MTTPIPTLSFASPLLFQNTSNFAHLGVFFQLLQRIEVRAGISHGFNFPPRLQVVARKQRSGEGGGRRVWRRRKLTKKDDMSHYKMDRIPFLEEQVRKVKE
        MT+PIPTLSFASP                    RI+ RAGISHGFNFPPRLQV ARKQR GEG GRRVWRRRKLTKKD+MS +KMDRIPFLEEQVRKVKE
Subjt:  MTTPIPTLSFASPLLFQNTSNFAHLGVFFQLLQRIEVRAGISHGFNFPPRLQVVARKQRSGEGGGRRVWRRRKLTKKDDMSHYKMDRIPFLEEQVRKVKE

Query:  QGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT
        QGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVE+NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAE+DPFKPGPHYLK+EFT
Subjt:  QGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT

A0A6J1J5H1 protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like isoform X1

5.9e-79

83.78

Show/hide

Query:  MTTPIPTLSFASPLLFQNTSNFAHLGVFFQLLQRIEVRAGISHGFNFPPRLQVVARKQRSGEGGGRRVWRRRKLTKKDDMSHYKMDRIPFLEEQVRKVKE
        MT+PIPTLSFASP                 L QRI+ RAGISHGFNFPPRLQV ARKQR GEG GRRVWRRRKLTKKD+MS +KMDRIPFLEEQVRKVKE
Subjt:  MTTPIPTLSFASPLLFQNTSNFAHLGVFFQLLQRIEVRAGISHGFNFPPRLQVVARKQRSGEGGGRRVWRRRKLTKKDDMSHYKMDRIPFLEEQVRKVKE

Query:  QGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT
        QGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVE+NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAE+DPFKPGPHYLK+EFT
Subjt:  QGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT

SwissProt top hits

e value

%identity

Alignment

Q8VZV9 Protein PLASTID TRANSCRIPTIONALLY ACTIVE 7

1.2e-47

74.19

Show/hide

Query:  EGGGRRVWRRRKLTKKDDMSHYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGF
        +  GRRVWRRR LTKKDDM  YKM R+PF+EEQVRK++E GK++TMDIE+LLL EDNRF+FVN VAAEA EYV+ NRDEYGGSKKAI HVLSNRVND GF
Subjt:  EGGGRRVWRRRKLTKKDDMSHYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGF

Query:  YRPDAYAEDDPFKPGPHYLKEEFT
         RP+AY E DP+KPGP YL E +T
Subjt:  YRPDAYAEDDPFKPGPHYLKEEFT

Arabidopsis top hits

e value

%identity

Alignment

AT5G24314.1 plastid transcriptionally active7

8.3e-49

74.19

Show/hide

Query:  EGGGRRVWRRRKLTKKDDMSHYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGF
        +  GRRVWRRR LTKKDDM  YKM R+PF+EEQVRK++E GK++TMDIE+LLL EDNRF+FVN VAAEA EYV+ NRDEYGGSKKAI HVLSNRVND GF
Subjt:  EGGGRRVWRRRKLTKKDDMSHYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGF

Query:  YRPDAYAEDDPFKPGPHYLKEEFT
         RP+AY E DP+KPGP YL E +T
Subjt:  YRPDAYAEDDPFKPGPHYLKEEFT

AT5G24314.2 plastid transcriptionally active7

1.3e-46

69.7

Show/hide

Query:  EGGGRRVWRRRK--------LTKKDDMSHYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLS
        +  GRRVWRRR         LTKKDDM  YKM R+PF+EEQVRK++E GK++TMDIE+LLL EDNRF+FVN VAAEA EYV+ NRDEYGGSKKAI HVLS
Subjt:  EGGGRRVWRRRK--------LTKKDDMSHYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLS

Query:  NRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT
        NRVND GF RP+AY E DP+KPGP YL E +T
Subjt:  NRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT

Sequences

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CDS sequence

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ATGACTACTCCAATTCCAACACTGTCCTTTGCTTCACCTCTTCTCTTTCAAAATACATCAAATTTTGCTCATCTTGGCGTTTTCTTTCAGTTGTTGCAGAGGATAGAGGT
GCGGGCGGGAATCTCTCATGGCTTTAACTTTCCTCCGCGATTACAGGTGGTCGCCAGAAAGCAGCGTAGTGGTGAAGGTGGTGGTCGGCGAGTGTGGCGACGAAGAAAAT
TGACGAAGAAGGATGACATGTCGCACTACAAAATGGATCGAATCCCATTCCTTGAGGAACAGGTAAGGAAGGTTAAGGAACAGGGGAAGCTTATAACAATGGACATCGAA
AGACTGTTATTATCAGAGGACAACCGCTTTGATTTTGTGAATGAGGTTGCAGCTGAGGCTAAGGAATATGTGGAGAGCAACCGTGATGAATATGGGGGTTCCAAGAAAGC
TATTCTTCACGTTCTTAGCAACCGAGTGAATGATGCAGGGTTTTATCGGCCAGATGCATATGCAGAAGACGACCCATTTAAACCCGGACCTCATTATCTGAAAGAAGAAT
TTACTTGA

mRNA sequence

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Protein sequence

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MTTPIPTLSFASPLLFQNTSNFAHLGVFFQLLQRIEVRAGISHGFNFPPRLQVVARKQRSGEGGGRRVWRRRKLTKKDDMSHYKMDRIPFLEEQVRKVKEQGKLITMDIE
RLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT

Spg002451 (gene) of Sponge gourd (cylindrica) v1 genome