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Spg002467 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg002467
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description60S ribosomal protein L36
Genome locationscaffold6:1452023..1454923
RNA-Seq ExpressionSpg002467
SyntenySpg002467
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000509 - Ribosomal protein L36e
IPR038097 - Ribosomal protein L36e domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574185.1 60S ribosomal protein L36-2, partial [Cucurbita argyrosperma subsp. sororia]4.2e-50100Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGGGEKKK
        RAGGGGEKKK
Subjt:  RAGGGGEKKK

KAG6576718.1 60S ribosomal protein L36-2, partial [Cucurbita argyrosperma subsp. sororia]9.3e-5099.09Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVR+LIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGGGEKKK
        RAGGGGEKKK
Subjt:  RAGGGGEKKK

KAG7013242.1 60S ribosomal protein L36-2, partial [Cucurbita argyrosperma subsp. argyrosperma]4.2e-50100Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGGGEKKK
        RAGGGGEKKK
Subjt:  RAGGGGEKKK

XP_022923053.1 60S ribosomal protein L36-2-like isoform X1 [Cucurbita moschata]9.3e-5099.09Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVR+LIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGGGEKKK
        RAGGGGEKKK
Subjt:  RAGGGGEKKK

XP_022945858.1 60S ribosomal protein L36-2-like [Cucurbita moschata]4.2e-50100Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGGGEKKK
        RAGGGGEKKK
Subjt:  RAGGGGEKKK

TrEMBL top hitse value%identityAlignment
A0A6J1E5T2 60S ribosomal protein L364.5e-5099.09Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVR+LIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGGGEKKK
        RAGGGGEKKK
Subjt:  RAGGGGEKKK

A0A6J1H2C5 60S ribosomal protein L362.0e-50100Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGGGEKKK
        RAGGGGEKKK
Subjt:  RAGGGGEKKK

A0A6J1HV53 60S ribosomal protein L367.7e-5099.09Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        MAPK PNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGGGEKKK
        RAGGGGEKKK
Subjt:  RAGGGGEKKK

A0A6J1JC29 60S ribosomal protein L364.5e-5099.09Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVR+LIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGGGEKKK
        RAGGGGEKKK
Subjt:  RAGGGGEKKK

A0A6J1K6N3 60S ribosomal protein L362.0e-50100Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGGGEKKK
        RAGGGGEKKK
Subjt:  RAGGGGEKKK

SwissProt top hitse value%identityAlignment
O80929 60S ribosomal protein L36-11.5e-3982.86Show/hide
Query:  TGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGG--
        TGLFVGLNKGH+VT++ELAPRP+ RKGK+SKR +F+R LIREVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR+ GG  
Subjt:  TGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGG--

Query:  -GEKK
          EKK
Subjt:  -GEKK

P52866 60S ribosomal protein L362.2e-3382.42Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKRE
        MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGK+SKR  FVR+LIREVAGF PYEKRITELLKVGKDKRALKV + K+G H +  K+ E
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKRE

Q9LRB8 60S ribosomal protein L369.4e-2971.88Show/hide
Query:  VGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGE
        VGLNKGH VTKK   PRPS RKG  S+RV  VR+++REVAG+APYE+R+ ELLKVGKDKRALK+ KRKLGTH R KKKREEM+ VLRKM+A   GE
Subjt:  VGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGE

Q9LZ57 60S ribosomal protein L36-36.9e-4082.86Show/hide
Query:  TGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGG-
        TGLFVGLNKGH+VTK+E  PRP++RKGK+SKR +F+R+LI+EVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR+GG G 
Subjt:  TGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGG-

Query:  -EKKK
         EKKK
Subjt:  -EKKK

Q9M352 60S ribosomal protein L36-25.7e-4281.25Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        M   Q  TGLFVGLNKGH+VT++ELAPRP  RKGK+SKR +F+R+LI+EVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGGG--EKKK
        R+GGGG  EKKK
Subjt:  RAGGGG--EKKK

Arabidopsis top hitse value%identityAlignment
AT2G37600.1 Ribosomal protein L36e family protein1.1e-4082.86Show/hide
Query:  TGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGG--
        TGLFVGLNKGH+VT++ELAPRP+ RKGK+SKR +F+R LIREVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR+ GG  
Subjt:  TGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGG--

Query:  -GEKK
          EKK
Subjt:  -GEKK

AT3G53740.2 Ribosomal protein L36e family protein4.0e-4381.25Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        M   Q  TGLFVGLNKGH+VT++ELAPRP  RKGK+SKR +F+R+LI+EVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGGG--EKKK
        R+GGGG  EKKK
Subjt:  RAGGGG--EKKK

AT3G53740.3 Ribosomal protein L36e family protein4.0e-4381.25Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        M   Q  TGLFVGLNKGH+VT++ELAPRP  RKGK+SKR +F+R+LI+EVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGGG--EKKK
        R+GGGG  EKKK
Subjt:  RAGGGG--EKKK

AT3G53740.4 Ribosomal protein L36e family protein4.0e-4381.25Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        M   Q  TGLFVGLNKGH+VT++ELAPRP  RKGK+SKR +F+R+LI+EVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGGG--EKKK
        R+GGGG  EKKK
Subjt:  RAGGGG--EKKK

AT5G02450.1 Ribosomal protein L36e family protein4.9e-4182.86Show/hide
Query:  TGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGG-
        TGLFVGLNKGH+VTK+E  PRP++RKGK+SKR +F+R+LI+EVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR+GG G 
Subjt:  TGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGG-

Query:  -EKKK
         EKKK
Subjt:  -EKKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCGAAGCAGCCGAATACTGGTCTCTTTGTAGGACTTAACAAAGGGCACATTGTTACAAAGAAGGAGTTGGCCCCGCGCCCCTCAGATCGTAAAGGAAAAAGTAG
CAAAAGAGTTCTCTTTGTGAGGAGTTTGATCCGGGAAGTCGCTGGCTTTGCACCATATGAGAAGAGAATCACTGAGCTTCTTAAAGTTGGAAAGGACAAGAGAGCACTAA
AAGTGGCTAAGAGAAAGTTGGGAACTCACAAGAGAGCCAAGAAGAAGAGAGAGGAGATGTCGAGCGTTCTCCGCAAGATGAGAGCTGGTGGAGGCGGTGAGAAGAAGAAA
TGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCGAAGCAGCCGAATACTGGTCTCTTTGTAGGACTTAACAAAGGGCACATTGTTACAAAGAAGGAGTTGGCCCCGCGCCCCTCAGATCGTAAAGGAAAAAGTAG
CAAAAGAGTTCTCTTTGTGAGGAGTTTGATCCGGGAAGTCGCTGGCTTTGCACCATATGAGAAGAGAATCACTGAGCTTCTTAAAGTTGGAAAGGACAAGAGAGCACTAA
AAGTGGCTAAGAGAAAGTTGGGAACTCACAAGAGAGCCAAGAAGAAGAGAGAGGAGATGTCGAGCGTTCTCCGCAAGATGAGAGCTGGTGGAGGCGGTGAGAAGAAGAAA
TGA
Protein sequenceShow/hide protein sequence
MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK