; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg002475 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg002475
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description30S ribosomal protein S11
Genome locationscaffold6:3336314..3337998
RNA-Seq ExpressionSpg002475
SyntenySpg002475
Gene Ontology termsGO:0000028 - ribosomal small subunit assembly (biological process)
GO:0000462 - maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0006412 - translation (biological process)
GO:0005763 - mitochondrial small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0048027 - mRNA 5'-UTR binding (molecular function)
GO:0070181 - small ribosomal subunit rRNA binding (molecular function)
InterPro domainsIPR001971 - Ribosomal protein S11
IPR036967 - Ribosomal protein S11 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7030891.1 putative ribosomal protein S11, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-12682.93Show/hide
Query:  MRRLPLSHLSSLFRSSSLSHGGSSFPPSRLSISPFIRSDARSPMS----SHGSDLTGSVQLDKQTSGCLDLPQGGSVNIGRQTVGSGWKALGAQGPCWGL
        MRRLP  HLSSLFRSSSLSH GSSF   RLSISPF  +DARSPMS    SHGS+++GSVQLD+Q SGC+DLP+G SVN+GR+ VG  WKALGAQGPCWGL
Subjt:  MRRLPLSHLSSLFRSSSLSHGGSSFPPSRLSISPFIRSDARSPMS----SHGSDLTGSVQLDKQTSGCLDLPQGGSVNIGRQTVGSGWKALGAQGPCWGL

Query:  GRSSGSVSVPYSTSSR---SFDNRPNADTGRNLNSMSFVRGILEEDGMDLMASSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEE
         RSS +VSVPYS+SSR    +D RPNADTGRN  SM+FVRGILEEDGMD M SSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKAS+GRLEE
Subjt:  GRSSGSVSVPYSTSSR---SFDNRPNADTGRNLNSMSFVRGILEEDGMDLMASSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEE

Query:  LKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV
        LKGGPKLSRYAAEA AEYVGRES+KLGLKSVVMRVKGFTYFKKK+QAI+SWRDGFTDS+ D+NPIVYIEDTTRRAHNGCRLPKQRRV
Subjt:  LKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV

XP_022942058.1 probable ribosomal protein S11, mitochondrial [Cucurbita moschata]1.8e-12682.93Show/hide
Query:  MRRLPLSHLSSLFRSSSLSHGGSSFPPSRLSISPFIRSDARSPMS----SHGSDLTGSVQLDKQTSGCLDLPQGGSVNIGRQTVGSGWKALGAQGPCWGL
        MRRLP  HLSSLFRSSSLSH GSSF  SRLSISPF  +DARSPMS    SHGS+++GSVQLD+Q SGC++LP+G SVN+GR+ VG  WKALGAQGPCWGL
Subjt:  MRRLPLSHLSSLFRSSSLSHGGSSFPPSRLSISPFIRSDARSPMS----SHGSDLTGSVQLDKQTSGCLDLPQGGSVNIGRQTVGSGWKALGAQGPCWGL

Query:  GRSSGSVSVPYSTSSR---SFDNRPNADTGRNLNSMSFVRGILEEDGMDLMASSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEE
         RSS +VSVPYS+SSR    +D RPNADTGRN  SM+FVRGILEEDGMD M SSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKAS+GRLEE
Subjt:  GRSSGSVSVPYSTSSR---SFDNRPNADTGRNLNSMSFVRGILEEDGMDLMASSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEE

Query:  LKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV
        LKGGPKLSRYAAEA AEYVGRES+KLGLKSVVMRVKGFTYFKKK+QAI+SWRDGFTDS+ D+NPIVYIEDTTRRAHNGCRLPKQRRV
Subjt:  LKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV

XP_022999735.1 probable ribosomal protein S11, mitochondrial [Cucurbita maxima]1.3e-12784.32Show/hide
Query:  MRRLPLSHLSSLFRSSSLSHGGSSFPPSRLSISPFIRSDARSPM----SSHGSDLTGSVQLDKQTSGCLDLPQGGSVNIGRQTVGSGWKALGAQGPCWGL
        MRRLPL HLSSLFRSSSLSH GSSF  SR+SISPF  +D RSPM    SSHGSDL+GSVQLD+Q SGC+DLP+G SVN+GR+ VG  WKALGAQGPCWGL
Subjt:  MRRLPLSHLSSLFRSSSLSHGGSSFPPSRLSISPFIRSDARSPM----SSHGSDLTGSVQLDKQTSGCLDLPQGGSVNIGRQTVGSGWKALGAQGPCWGL

Query:  GRSSGSVSVPYSTSSR---SFDNRPNADTGRNLNSMSFVRGILEEDGMDLMASSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEE
         RSS +VSVPYS+SSR    +D  PNADTGRN  SM+FVRGILEEDGM+ M SSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEE
Subjt:  GRSSGSVSVPYSTSSR---SFDNRPNADTGRNLNSMSFVRGILEEDGMDLMASSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEE

Query:  LKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV
        LKGGPKLSRYAAEA AEYVGRESRKLGLKSVVMRVKGFTYFKKK+QAI+SWRDGFTDSRSD+NPIVYIEDTTRRAHNGCRLPKQRRV
Subjt:  LKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV

XP_023526167.1 probable ribosomal protein S11, mitochondrial [Cucurbita pepo subsp. pepo]1.9e-12381.88Show/hide
Query:  MRRLPLSHLSSLFRSSSLSHGGSSFPPSRLSISPFIRSDARSPMS----SHGSDLTGSVQLDKQTSGCLDLPQGGSVNIGRQTVGSGWKALGAQGPCWGL
        MRRLPL HLSSLFRSSSLSH GSSF  SRLSISPF  +DARSPMS    S GS+++GSVQ+D+Q SGC+DLP+G SVN+GR+ VG   K LGAQGPCWGL
Subjt:  MRRLPLSHLSSLFRSSSLSHGGSSFPPSRLSISPFIRSDARSPMS----SHGSDLTGSVQLDKQTSGCLDLPQGGSVNIGRQTVGSGWKALGAQGPCWGL

Query:  GRSSGSVSVPYSTSSR---SFDNRPNADTGRNLNSMSFVRGILEEDGMDLMASSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEE
         RSS +VSVPYS+SSR    +D RPNADTGRN  SM+FVRGILEED MD M SSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKAS+GRLEE
Subjt:  GRSSGSVSVPYSTSSR---SFDNRPNADTGRNLNSMSFVRGILEEDGMDLMASSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEE

Query:  LKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV
        LKGGPKLSRYAAEA AEYVGRES+KLGLKSVVMRVKGFTYFKKK+QAI+SWRDGFTDS+ D+NPIVYIEDTTRRAHNGCRLPKQRRV
Subjt:  LKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV

XP_038903066.1 probable ribosomal protein S11, mitochondrial [Benincasa hispida]1.9e-11580.28Show/hide
Query:  MRRLPLSHLSSLFRSSSLSHGGSSFPPSRLSISPFIRSDARSPMSS-HGSDLTGSVQLDKQTSGCLDLPQGGSVNIGRQTVGSGWKALGAQGPCWGLGRS
        M +L LSHL SLFRSSSL H G SF PSRLSISPFI SD+RS MSS H SDLTGS++LD Q SGCLDL QG S N+GR+ VG GWK+ GAQG CW LGRS
Subjt:  MRRLPLSHLSSLFRSSSLSHGGSSFPPSRLSISPFIRSDARSPMSS-HGSDLTGSVQLDKQTSGCLDLPQGGSVNIGRQTVGSGWKALGAQGPCWGLGRS

Query:  SGSVSVPYSTSSR---SFDNRPNADTGRNLNSMSFVRGILEEDGMDLMASSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEELKG
        S  VSV +STS R    +DNRPNADTGRNLNSMSFVR  LEE G     SS+F R PNMEHNADIVHVKL+RNNTFITVTDNKGNTKLKASAGRLEELKG
Subjt:  SGSVSVPYSTSSR---SFDNRPNADTGRNLNSMSFVRGILEEDGMDLMASSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEELKG

Query:  GPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV
        GPKLSRYAAEA+AEYVGRESRKLGLKSVVMRVKGFT FK+KRQAI+SWR GFTDSRSD+NPIVYIEDTTRRAHNGCRLPKQRRV
Subjt:  GPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV

TrEMBL top hitse value%identityAlignment
A0A0A0KVQ8 Uncharacterized protein5.4e-10072.63Show/hide
Query:  MRRLPLSHLSSLFRSSSLSHGGSSFPPSRLSISPFIRSDARSPMSS-HGSDLTGSVQLDKQTSGCLDLPQGGSVNIGRQTVGSGWKALGAQGPCWGLGRS
        M +L LSHLSSLFRSSSLS    SF PSRLSISPFI SDA S MSS H SDLTGS+Q   Q SGCL      S N+GR+ VG GWK++G QGP  GL R 
Subjt:  MRRLPLSHLSSLFRSSSLSHGGSSFPPSRLSISPFIRSDARSPMSS-HGSDLTGSVQLDKQTSGCLDLPQGGSVNIGRQTVGSGWKALGAQGPCWGLGRS

Query:  SGSVSVPYSTSSR---SFDNRPN-ADTGRNLNSMSFVRGILEEDGMDLMASSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEELK
        S  VS+PYS SSR    +DNRPN  DTGRNL  M+FVRGILEE+      + QF RP NMEHNADIVH+KLMRNN+F+TVTDNKGNTKLKASAGRLE   
Subjt:  SGSVSVPYSTSSR---SFDNRPN-ADTGRNLNSMSFVRGILEEDGMDLMASSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEELK

Query:  GGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV
        GG KLSRY+A++IAEYVGRESRKLGLKSVVMRVKGFT+FKKK+QAI+SWRDGFTDSR+D+NPIVY+EDTTRRAHNGCRLPK+RRV
Subjt:  GGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV

A0A5A7TPI6 Putative ribosomal protein S113.3e-9771.68Show/hide
Query:  MRRLPLSHLSSLFRSSSLSHGGSSFPPSRLSISPFIRSDARSPMSSH-GSDLTGSVQLDKQTSGCLDLPQGGSVNIGRQTVGSGWKALGAQGPCWGLGRS
        M +L LSHLS LFRSSSLS    SF PSRLSISPFI SDA S  SS   S LTGS+Q     SG          ++GR+ VG GWKA+G QGP WGL RS
Subjt:  MRRLPLSHLSSLFRSSSLSHGGSSFPPSRLSISPFIRSDARSPMSSH-GSDLTGSVQLDKQTSGCLDLPQGGSVNIGRQTVGSGWKALGAQGPCWGLGRS

Query:  SGSVSVPYSTSSR---SFDNRPN-ADTGRNLNSMSFVRGILEEDGMDLMASSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEELK
        + SVSVPYS SSR    +DNRPN  DTGRNL +++FVRGILEED        Q+ RP NMEHNADIVH+KLMRNN F+TVTDNKGNTKLKASAGRLEELK
Subjt:  SGSVSVPYSTSSR---SFDNRPN-ADTGRNLNSMSFVRGILEEDGMDLMASSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEELK

Query:  -GGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV
         GG KLSRY+ ++IAEYVGRESRKLGLKSVVMRVKGFT+FKKK+QAI+SWRDGFTDSRSD+NPIVYIEDTTRRAHNGCRLPK+RRV
Subjt:  -GGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV

A0A6J1CJJ5 probable ribosomal protein S11, mitochondrial4.6e-11580.84Show/hide
Query:  MRRLPLSHLSSLFRSSSLSHGGSSFPPSRLSISPFIRSDARSPMSS---HGSDLTGSVQLDKQTSGCLDLPQGGSVNIGRQ-TVGSGWKALGAQGPCWGL
        MRRL LSHLSSLFRSSSLSHG SS  P R SIS F  SDARSPM+S   H SDLTGSVQLD Q SGCLDLPQG S+++GRQ  VG  WKALG       +
Subjt:  MRRLPLSHLSSLFRSSSLSHGGSSFPPSRLSISPFIRSDARSPMSS---HGSDLTGSVQLDKQTSGCLDLPQGGSVNIGRQ-TVGSGWKALGAQGPCWGL

Query:  GRSSGSVSVPYSTSSR---SFDNRPNADTGRNLNSMSFVRGILEEDGMDLMASSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEE
        GRS  +VSVPY+ +S+    +D+R NADTGRN  SM+FVRGILEEDG D MA S FPRPPNME NADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEE
Subjt:  GRSSGSVSVPYSTSSR---SFDNRPNADTGRNLNSMSFVRGILEEDGMDLMASSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEE

Query:  LKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV
        LKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSD+NPIVYIEDTTRRAHNGCRLPKQRRV
Subjt:  LKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV

A0A6J1FTT5 probable ribosomal protein S11, mitochondrial8.9e-12782.93Show/hide
Query:  MRRLPLSHLSSLFRSSSLSHGGSSFPPSRLSISPFIRSDARSPMS----SHGSDLTGSVQLDKQTSGCLDLPQGGSVNIGRQTVGSGWKALGAQGPCWGL
        MRRLP  HLSSLFRSSSLSH GSSF  SRLSISPF  +DARSPMS    SHGS+++GSVQLD+Q SGC++LP+G SVN+GR+ VG  WKALGAQGPCWGL
Subjt:  MRRLPLSHLSSLFRSSSLSHGGSSFPPSRLSISPFIRSDARSPMS----SHGSDLTGSVQLDKQTSGCLDLPQGGSVNIGRQTVGSGWKALGAQGPCWGL

Query:  GRSSGSVSVPYSTSSR---SFDNRPNADTGRNLNSMSFVRGILEEDGMDLMASSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEE
         RSS +VSVPYS+SSR    +D RPNADTGRN  SM+FVRGILEEDGMD M SSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKAS+GRLEE
Subjt:  GRSSGSVSVPYSTSSR---SFDNRPNADTGRNLNSMSFVRGILEEDGMDLMASSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEE

Query:  LKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV
        LKGGPKLSRYAAEA AEYVGRES+KLGLKSVVMRVKGFTYFKKK+QAI+SWRDGFTDS+ D+NPIVYIEDTTRRAHNGCRLPKQRRV
Subjt:  LKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV

A0A6J1KGF8 probable ribosomal protein S11, mitochondrial6.1e-12884.32Show/hide
Query:  MRRLPLSHLSSLFRSSSLSHGGSSFPPSRLSISPFIRSDARSPM----SSHGSDLTGSVQLDKQTSGCLDLPQGGSVNIGRQTVGSGWKALGAQGPCWGL
        MRRLPL HLSSLFRSSSLSH GSSF  SR+SISPF  +D RSPM    SSHGSDL+GSVQLD+Q SGC+DLP+G SVN+GR+ VG  WKALGAQGPCWGL
Subjt:  MRRLPLSHLSSLFRSSSLSHGGSSFPPSRLSISPFIRSDARSPM----SSHGSDLTGSVQLDKQTSGCLDLPQGGSVNIGRQTVGSGWKALGAQGPCWGL

Query:  GRSSGSVSVPYSTSSR---SFDNRPNADTGRNLNSMSFVRGILEEDGMDLMASSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEE
         RSS +VSVPYS+SSR    +D  PNADTGRN  SM+FVRGILEEDGM+ M SSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEE
Subjt:  GRSSGSVSVPYSTSSR---SFDNRPNADTGRNLNSMSFVRGILEEDGMDLMASSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEE

Query:  LKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV
        LKGGPKLSRYAAEA AEYVGRESRKLGLKSVVMRVKGFTYFKKK+QAI+SWRDGFTDSRSD+NPIVYIEDTTRRAHNGCRLPKQRRV
Subjt:  LKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV

SwissProt top hitse value%identityAlignment
A5D5E6 30S ribosomal protein S111.7e-1039.17Show/hide
Query:  IVHVKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDRNPIVY
        + H+K   NNT +T+TD KGNT   +SAG++   KG  K + +AA+  AE   RE+ + GLK V + VKG      +  AI S +    +       +  
Subjt:  IVHVKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDRNPIVY

Query:  IEDTTRRAHNGCRLPKQRRV
        I+D T   HNGCR PK+RRV
Subjt:  IEDTTRRAHNGCRLPKQRRV

A8ETK4 30S ribosomal protein S112.3e-1035.83Show/hide
Query:  IVHVKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDRNPIVY
        IVH+    NNT +TVTDN GN    +SAG L   KG  K + +AA+A  E    ++ + G+K+V ++++G    +      +   DG          + +
Subjt:  IVHVKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDRNPIVY

Query:  IEDTTRRAHNGCRLPKQRRV
        ++D T  AHNGCR PK+RRV
Subjt:  IEDTTRRAHNGCRLPKQRRV

P46746 Ribosomal protein S11, mitochondrial1.6e-1135.51Show/hide
Query:  LMASSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIM
        L+  SQ  R   +E  + IVH++   NNT IT+TD +GNT+   SAG L   K   K + YA+ A AE +  ++   G +++++++KG  Y KK      
Subjt:  LMASSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIM

Query:  SWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV
                 +     I  I++ T  AHNGCR PK+RRV
Subjt:  SWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV

Q0BYD7 30S ribosomal protein S116.5e-1037.5Show/hide
Query:  IVHVKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDRNPIVY
        IVHV    NNT +T+TD +GNT   +S+G +   KG  K + YAA+  AE   +++++ GL++V +RV+G    ++     +    G T        +  
Subjt:  IVHVKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDRNPIVY

Query:  IEDTTRRAHNGCRLPKQRRV
        I DTT   HNGCR PK+RRV
Subjt:  IEDTTRRAHNGCRLPKQRRV

Q8VZT8 Probable ribosomal protein S11, mitochondrial2.5e-4952.15Show/hide
Query:  GLGRSSGSVSVPYSTSSRSFDNRPNADTGRNLNSMSFVRGILEEDGMDLMASSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEEL
        G G S+ S+S   + +  S   + N+ +G   + + FVR ++E++G          + PN+E NADI+H+K++RNNTF+TVTD+KGN K KA++G L +L
Subjt:  GLGRSSGSVSVPYSTSSRSFDNRPNADTGRNLNSMSFVRGILEEDGMDLMASSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEEL

Query:  KGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV
        KGG K++ Y A+A AE +GR ++ +GLKSVV++V GFT+F KK++AI+++RDGFT+SRSD+NPIVYIEDTTR+AHNGCRLP++RRV
Subjt:  KGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV

Arabidopsis top hitse value%identityAlignment
AT1G31817.1 Ribosomal L18p/L5e family protein1.7e-5052.15Show/hide
Query:  GLGRSSGSVSVPYSTSSRSFDNRPNADTGRNLNSMSFVRGILEEDGMDLMASSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEEL
        G G S+ S+S   + +  S   + N+ +G   + + FVR ++E++G          + PN+E NADI+H+K++RNNTF+TVTD+KGN K KA++G L +L
Subjt:  GLGRSSGSVSVPYSTSSRSFDNRPNADTGRNLNSMSFVRGILEEDGMDLMASSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEEL

Query:  KGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV
        KGG K++ Y A+A AE +GR ++ +GLKSVV++V GFT+F KK++AI+++RDGFT+SRSD+NPIVYIEDTTR+AHNGCRLP++RRV
Subjt:  KGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV

ATCG00750.1 ribosomal protein S113.8e-0530Show/hide
Query:  IVHVKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDRNPIVY
        ++HV+   NNT +TVTD +G     +SAG     +G  + + +AA+  A    R     G++   +R+KG    +      +  R G          + +
Subjt:  IVHVKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDRNPIVY

Query:  IEDTTRRAHNGCRLPKQRRV
        + D T   HNGCR PK+RRV
Subjt:  IEDTTRRAHNGCRLPKQRRV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGAGACTTCCCCTCTCTCACCTCTCTTCTCTCTTCCGTTCGTCCTCTCTCTCTCATGGCGGCTCTTCTTTTCCTCCTTCTCGCCTCTCCATTTCCCCATTTATTCG
CTCAGATGCTCGTTCTCCCATGTCCTCTCACGGATCAGATCTCACTGGATCCGTTCAACTAGACAAGCAGACTTCAGGCTGTCTTGACCTTCCACAAGGTGGTTCTGTGA
ATATTGGACGGCAGACTGTAGGAAGTGGTTGGAAAGCCTTGGGAGCTCAGGGGCCTTGTTGGGGTTTGGGGCGTTCGAGTGGAAGTGTCTCTGTTCCTTATTCTACTAGC
TCTAGAAGTTTTGACAACCGGCCGAATGCTGATACTGGAAGGAATCTCAATTCCATGAGCTTCGTCAGGGGAATTTTAGAGGAAGATGGAATGGATTTAATGGCTAGTTC
TCAGTTCCCAAGACCACCCAATATGGAGCACAATGCTGATATTGTCCATGTAAAGCTGATGCGTAACAATACATTTATCACAGTCACGGATAACAAGGGAAATACAAAGC
TTAAGGCCTCTGCTGGACGTCTAGAAGAACTGAAAGGAGGGCCTAAGCTGTCCCGTTATGCTGCTGAAGCAATTGCAGAGTATGTTGGCCGTGAATCTAGAAAGTTGGGG
TTAAAATCAGTTGTGATGAGGGTGAAAGGCTTTACTTATTTTAAGAAGAAAAGGCAAGCGATCATGAGTTGGAGAGACGGGTTTACGGATTCTAGAAGTGATCGAAATCC
GATTGTCTACATTGAAGATACTACAAGACGTGCCCACAATGGTTGCCGACTCCCAAAGCAACGCCGTGTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGGAGACTTCCCCTCTCTCACCTCTCTTCTCTCTTCCGTTCGTCCTCTCTCTCTCATGGCGGCTCTTCTTTTCCTCCTTCTCGCCTCTCCATTTCCCCATTTATTCG
CTCAGATGCTCGTTCTCCCATGTCCTCTCACGGATCAGATCTCACTGGATCCGTTCAACTAGACAAGCAGACTTCAGGCTGTCTTGACCTTCCACAAGGTGGTTCTGTGA
ATATTGGACGGCAGACTGTAGGAAGTGGTTGGAAAGCCTTGGGAGCTCAGGGGCCTTGTTGGGGTTTGGGGCGTTCGAGTGGAAGTGTCTCTGTTCCTTATTCTACTAGC
TCTAGAAGTTTTGACAACCGGCCGAATGCTGATACTGGAAGGAATCTCAATTCCATGAGCTTCGTCAGGGGAATTTTAGAGGAAGATGGAATGGATTTAATGGCTAGTTC
TCAGTTCCCAAGACCACCCAATATGGAGCACAATGCTGATATTGTCCATGTAAAGCTGATGCGTAACAATACATTTATCACAGTCACGGATAACAAGGGAAATACAAAGC
TTAAGGCCTCTGCTGGACGTCTAGAAGAACTGAAAGGAGGGCCTAAGCTGTCCCGTTATGCTGCTGAAGCAATTGCAGAGTATGTTGGCCGTGAATCTAGAAAGTTGGGG
TTAAAATCAGTTGTGATGAGGGTGAAAGGCTTTACTTATTTTAAGAAGAAAAGGCAAGCGATCATGAGTTGGAGAGACGGGTTTACGGATTCTAGAAGTGATCGAAATCC
GATTGTCTACATTGAAGATACTACAAGACGTGCCCACAATGGTTGCCGACTCCCAAAGCAACGCCGTGTCTAG
Protein sequenceShow/hide protein sequence
MRRLPLSHLSSLFRSSSLSHGGSSFPPSRLSISPFIRSDARSPMSSHGSDLTGSVQLDKQTSGCLDLPQGGSVNIGRQTVGSGWKALGAQGPCWGLGRSSGSVSVPYSTS
SRSFDNRPNADTGRNLNSMSFVRGILEEDGMDLMASSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLG
LKSVVMRVKGFTYFKKKRQAIMSWRDGFTDSRSDRNPIVYIEDTTRRAHNGCRLPKQRRV