; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg002477 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg002477
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibonuclease T(2)
Genome locationscaffold6:3496312..3497801
RNA-Seq ExpressionSpg002477
SyntenySpg002477
Gene Ontology termsGO:0006401 - RNA catabolic process (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016020 - membrane (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0033897 - ribonuclease T2 activity (molecular function)
InterPro domainsIPR001568 - Ribonuclease T2-like
IPR036430 - Ribonuclease T2-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576854.1 Ribonuclease 2, partial [Cucurbita argyrosperma subsp. sororia]8.9e-1954.55Show/hide
Query:  KALEDAGIKASNTEKYPIDDVKAAVQVAFHASPRLTCVENGVIQELRLCFDKDFKTRECDLTESCPQLVRFPTYEPQ
        KAL DAG  ASNTEKYP++DV  AV+ A +++P+++C + G ++EL +CFDK F+ R+CDL  SCP+ ++ PTYEPQ
Subjt:  KALEDAGIKASNTEKYPIDDVKAAVQVAFHASPRLTCVENGVIQELRLCFDKDFKTRECDLTESCPQLVRFPTYEPQ
XP_022140985.1 ribonuclease 2-like [Momordica charantia]6.8e-1957.14Show/hide
Query:  KALEDAGIKASNTEKYPIDDVKAAVQVAFHASPRLTCVENGVIQELRLCFDKDFKTRECDLTESCPQLVRFPTYEPQ
        K L DAG  AS+TEKY + DV AAVQ AF+A+P+++C + G ++EL LCFDK F+ R+CDL  SCP  ++ PTYEPQ
Subjt:  KALEDAGIKASNTEKYPIDDVKAAVQVAFHASPRLTCVENGVIQELRLCFDKDFKTRECDLTESCPQLVRFPTYEPQ
XP_022922895.1 ribonuclease 2-like [Cucurbita moschata]8.9e-1954.55Show/hide
Query:  KALEDAGIKASNTEKYPIDDVKAAVQVAFHASPRLTCVENGVIQELRLCFDKDFKTRECDLTESCPQLVRFPTYEPQ
        KAL DAG  ASNTEKYP++DV  AV+ A +++P+++C + G ++EL +CFDK F+ R+CDL  SCP+ ++ PTYEPQ
Subjt:  KALEDAGIKASNTEKYPIDDVKAAVQVAFHASPRLTCVENGVIQELRLCFDKDFKTRECDLTESCPQLVRFPTYEPQ
XP_022984766.1 ribonuclease 2-like [Cucurbita maxima]2.3e-1955.13Show/hide
Query:  KALEDAGIKASNTEKYPIDDVKAAVQVAFHASPRLTCVENGVIQELRLCFDKDFKTRECDLTESCPQLVRFPTYEPQG
        KAL DAG  ASNTEKYP+ DV  AV+ A +++P+++C + G ++EL +CFDK+F+ R+CDL  SCP+ ++ PTYEPQG
Subjt:  KALEDAGIKASNTEKYPIDDVKAAVQVAFHASPRLTCVENGVIQELRLCFDKDFKTRECDLTESCPQLVRFPTYEPQG
XP_038876700.1 ribonuclease 2-like [Benincasa hispida]8.0e-2055.84Show/hide
Query:  KALEDAGIKASNTEKYPIDDVKAAVQVAFHASPRLTCVENGVIQELRLCFDKDFKTRECDLTESCPQLVRFPTYEPQ
        K L DAG  ASNTEKYPI+DV AA++  F+++P++TC + GV++EL +CFDK F+ R+CDL  SCP  ++ PTY+PQ
Subjt:  KALEDAGIKASNTEKYPIDDVKAAVQVAFHASPRLTCVENGVIQELRLCFDKDFKTRECDLTESCPQLVRFPTYEPQ
TrEMBL top hitse value%identityAlignment
A0A0A0L0P9 Ribonuclease T(2)7.3e-1956.41Show/hide
Query:  KALEDAGIKASNTEKYPIDDVKAAVQVAF-HASPRLTCVENGVIQELRLCFDKDFKTRECDLTESCPQLVRFPTYEPQ
        K L DAG  ASNTEKYPI+DV AA++  F +A+P+++C + G ++EL LCFDK F+ R+C+L  SCP  ++FPTYEPQ
Subjt:  KALEDAGIKASNTEKYPIDDVKAAVQVAF-HASPRLTCVENGVIQELRLCFDKDFKTRECDLTESCPQLVRFPTYEPQ
A0A5D3E236 Ribonuclease T(2)3.6e-1855.13Show/hide
Query:  KALEDAGIKASNTEKYPIDDVKAAVQVAFH-ASPRLTCVENGVIQELRLCFDKDFKTRECDLTESCPQLVRFPTYEPQ
        K L + G  ASNTEKYPI+DV AA++  F+ A+P++TC + GV++EL LCFDK F+ R+C+L  SCP  ++ PTYEPQ
Subjt:  KALEDAGIKASNTEKYPIDDVKAAVQVAFH-ASPRLTCVENGVIQELRLCFDKDFKTRECDLTESCPQLVRFPTYEPQ
A0A6J1CGP7 Ribonuclease T(2)3.3e-1957.14Show/hide
Query:  KALEDAGIKASNTEKYPIDDVKAAVQVAFHASPRLTCVENGVIQELRLCFDKDFKTRECDLTESCPQLVRFPTYEPQ
        K L DAG  AS+TEKY + DV AAVQ AF+A+P+++C + G ++EL LCFDK F+ R+CDL  SCP  ++ PTYEPQ
Subjt:  KALEDAGIKASNTEKYPIDDVKAAVQVAFHASPRLTCVENGVIQELRLCFDKDFKTRECDLTESCPQLVRFPTYEPQ
A0A6J1EA39 Ribonuclease T(2)4.3e-1954.55Show/hide
Query:  KALEDAGIKASNTEKYPIDDVKAAVQVAFHASPRLTCVENGVIQELRLCFDKDFKTRECDLTESCPQLVRFPTYEPQ
        KAL DAG  ASNTEKYP++DV  AV+ A +++P+++C + G ++EL +CFDK F+ R+CDL  SCP+ ++ PTYEPQ
Subjt:  KALEDAGIKASNTEKYPIDDVKAAVQVAFHASPRLTCVENGVIQELRLCFDKDFKTRECDLTESCPQLVRFPTYEPQ
A0A6J1J670 Ribonuclease T(2)1.1e-1955.13Show/hide
Query:  KALEDAGIKASNTEKYPIDDVKAAVQVAFHASPRLTCVENGVIQELRLCFDKDFKTRECDLTESCPQLVRFPTYEPQG
        KAL DAG  ASNTEKYP+ DV  AV+ A +++P+++C + G ++EL +CFDK+F+ R+CDL  SCP+ ++ PTYEPQG
Subjt:  KALEDAGIKASNTEKYPIDDVKAAVQVAFHASPRLTCVENGVIQELRLCFDKDFKTRECDLTESCPQLVRFPTYEPQG
SwissProt top hitse value%identityAlignment
P42814 Ribonuclease 23.4e-1347.5Show/hide
Query:  LEDAGIKASNTEKYPIDDVKAAVQVAFHASPRLTCVENGVIQELRLCFDKDFKTREC----DLT--ESCPQLVRFPTYEP
        L  AG  ASN+EKYP+  +  A+Q AFH +P + C +   I E+R+CF KDFK R+C    DLT  +SCP+ V  P Y P
Subjt:  LEDAGIKASNTEKYPIDDVKAAVQVAFHASPRLTCVENGVIQELRLCFDKDFKTREC----DLT--ESCPQLVRFPTYEP
Arabidopsis top hitse value%identityAlignment
AT2G39780.1 ribonuclease 22.4e-1447.5Show/hide
Query:  LEDAGIKASNTEKYPIDDVKAAVQVAFHASPRLTCVENGVIQELRLCFDKDFKTREC----DLT--ESCPQLVRFPTYEP
        L  AG  ASN+EKYP+  +  A+Q AFH +P + C +   I E+R+CF KDFK R+C    DLT  +SCP+ V  P Y P
Subjt:  LEDAGIKASNTEKYPIDDVKAAVQVAFHASPRLTCVENGVIQELRLCFDKDFKTREC----DLT--ESCPQLVRFPTYEP
AT2G39780.2 ribonuclease 22.4e-1447.5Show/hide
Query:  LEDAGIKASNTEKYPIDDVKAAVQVAFHASPRLTCVENGVIQELRLCFDKDFKTREC----DLT--ESCPQLVRFPTYEP
        L  AG  ASN+EKYP+  +  A+Q AFH +P + C +   I E+R+CF KDFK R+C    DLT  +SCP+ V  P Y P
Subjt:  LEDAGIKASNTEKYPIDDVKAAVQVAFHASPRLTCVENGVIQELRLCFDKDFKTREC----DLT--ESCPQLVRFPTYEP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGAAGACGAACTTTTCTGTAGGGTGAAAGCTTTGGAGGATGCTGGAATTAAAGCTTCCAATACTGAAAAGTATCCAATTGACGATGTCAAAGCTGCAGTTCAAGT
TGCTTTCCATGCAAGTCCAAGGCTTACATGTGTTGAAAATGGAGTTATTCAGGAACTTCGGCTATGCTTTGACAAAGATTTTAAGACACGCGAATGTGATCTTACGGAAT
CATGCCCACAACTTGTTCGCTTCCCAACATATGAGCCACAAGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGAAGACGAACTTTTCTGTAGGGTGAAAGCTTTGGAGGATGCTGGAATTAAAGCTTCCAATACTGAAAAGTATCCAATTGACGATGTCAAAGCTGCAGTTCAAGT
TGCTTTCCATGCAAGTCCAAGGCTTACATGTGTTGAAAATGGAGTTATTCAGGAACTTCGGCTATGCTTTGACAAAGATTTTAAGACACGCGAATGTGATCTTACGGAAT
CATGCCCACAACTTGTTCGCTTCCCAACATATGAGCCACAAGGTTAA
Protein sequenceShow/hide protein sequence
MLEDELFCRVKALEDAGIKASNTEKYPIDDVKAAVQVAFHASPRLTCVENGVIQELRLCFDKDFKTRECDLTESCPQLVRFPTYEPQG