; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg002478 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg002478
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDUF4283 domain-containing protein
Genome locationscaffold6:3307865..3309971
RNA-Seq ExpressionSpg002478
SyntenySpg002478
Gene Ontology termsGO:0006281 - DNA repair (biological process)
GO:0004518 - nuclease activity (molecular function)
InterPro domainsIPR004808 - AP endonuclease 1
IPR025558 - Domain of unknown function DUF4283
IPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044449.1 hypothetical protein E6C27_scaffold46G001820 [Cucumis melo var. makuwa]1.0e-3124.56Show/hide
Query:  PLQPDKALLACEDEEQARTLANIKGWYKVGKYQVHFFPWSAETMLGKPKVPSYGGRIKVRNLPLDKWSIETFKEIGDKCGGYLETASKTLSRMDMMEIGI
        P   DKALL  +D+E A+ L    GW  VG + V F  WS         +PSYGG  + R +PL  W++ TF +IG+  GG+++ A ++++++++ E  I
Subjt:  PLQPDKALLACEDEEQARTLANIKGWYKVGKYQVHFFPWSAETMLGKPKVPSYGGRIKVRNLPLDKWSIETFKEIGDKCGGYLETASKTLSRMDMMEIGI

Query:  KVKENSMGFIPTEVHIPLSSCNPIVVKIDPFFVEDFNIGYIAGIHGRIPAPLGEN---NNPHAVE------------------------DKEND------
        KVKEN  GF+P  + I     +  +++        +       IHG       EN    NP+A +                           ND      
Subjt:  KVKENSMGFIPTEVHIPLSSCNPIVVKIDPFFVEDFNIGYIAGIHGRIPAPLGEN---NNPHAVE------------------------DKEND------

Query:  ----------------YREEKDNPRAAAIIREGVLSSPCTTAMEDSSL----------PTPYRAIIQTASPPTICKLFESQHEQQPYIEDPIPLSIEEPN
                        Y  + DN  ++  I++    S  T   +   +          P   +  +  +SP     LF +       ++   P+S  +  
Subjt:  ----------------YREEKDNPRAAAIIREGVLSSPCTTAMEDSSL----------PTPYRAIIQTASPPTICKLFESQHEQQPYIEDPIPLSIEEPN

Query:  PLKAQLAMGIE-------------ETTLIDIEVEKADTEDME---------------TRENCVDPALYLP---------ILFPWLTEHGMCIMPMPSRHK
            +    I+             ET+    + +K   +  E               T  +C +   Y+P         I+   L     C      + K
Subjt:  PLKAQLAMGIE-------------ETTLIDIEVEKADTEDME---------------TRENCVDPALYLP---------ILFPWLTEHGMCIMPMPSRHK

Query:  TTN----------STKKK-TKWVKELPNLHSTVNYEKALTGCLKDRNIAWTSIDTVGASGGIAIIWNDYSFTVLEVIEGIFSLSIHLSLVDGFSFWIIGV
          N          S K+K T W+KE  NL    ++         DR I   SI     + G+  +  D       VI+G FS+SI +   +G S+W+  +
Subjt:  TTN----------STKKK-TKWVKELPNLHSTVNYEKALTGCLKDRNIAWTSIDTVGASGGIAIIWNDYSFTVLEVIEGIFSLSIHLSLVDGFSFWIIGV

Query:  YDPNSSRDKKVFWRELADLQALCLPNWVLGDDFNVTRWTWEKSTITAPSRVMRTFNRFIESAALQDHPPL
        Y P   +++ +FW EL +L+++C P W+LG DFNV RW  E ST    S  M+ FN FI +  L D PPL
Subjt:  YDPNSSRDKKVFWRELADLQALCLPNWVLGDDFNVTRWTWEKSTITAPSRVMRTFNRFIESAALQDHPPL

KAA0056838.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]8.1e-2923.41Show/hide
Query:  SVSPLQPDKALLACEDEEQARTLAN--IKGWYKVGKYQVHFFPWSAETMLGKPKVPSYGGRIKVRNLPLDKWSIETFKEIGDKCGGYLETASKTLSRMDM
        S  P Q DKA+L    +      +N    GW  VG YQV F  W +        +PSYGG ++ R +PL  W+  TF+ IG  CGG+L+ A +T+    +
Subjt:  SVSPLQPDKALLACEDEEQARTLAN--IKGWYKVGKYQVHFFPWSAETMLGKPKVPSYGGRIKVRNLPLDKWSIETFKEIGDKCGGYLETASKTLSRMDM

Query:  MEIGIKVKENSMGFIPTEVHIPLSSC-NPIVVKIDPF---FVEDFNI-----------------GYIA------GIHGRIPAPLG-------ENNNPHAV
        ++  IKV+ N  GF+P  + I  +   N IV  + P    ++ + N+                  ++A      G     P P          N++ H++
Subjt:  MEIGIKVKENSMGFIPTEVHIPLSSC-NPIVVKIDPF---FVEDFNI-----------------GYIA------GIHGRIPAPLG-------ENNNPHAV

Query:  ----EDKENDYREEKDNP-------------RAAAIIRE------------------------GVLSSPCTT-------AMEDSSLPTPYRAIIQTASPP
            + K+N+  E + +P             +A  II +                        G+ S+   T       ++E S++   +          
Subjt:  ----EDKENDYREEKDNP-------------RAAAIIRE------------------------GVLSSPCTT-------AMEDSSLPTPYRAIIQTASPP

Query:  TICKLFESQHEQQPYIEDPIPLSIEEPNPLKAQLAMGIEETTLIDIE--VEKADTEDMETREN--------CVDPALYLPILFPWLTEHGMCIMPMPSRH
             +  + + Q   ED   LS++E      Q+ + ++   +  +E  ++  +   ++T  N          D A    +      + G       SR 
Subjt:  TICKLFESQHEQQPYIEDPIPLSIEEPNPLKAQLAMGIEETTLIDIE--VEKADTEDMETREN--------CVDPALYLPILFPWLTEHGMCIMPMPSRH

Query:  KTTNSTK----------------KKTKWVKE-----LPNLHSTVNYEKALTGCLKDRNIAWTSIDTVGASGGIAIIWNDYSFTVLEVIEGIFSLSIHLSL
            ++K                K   W+KE      P   + V    +    + D+N+       +G  GGI ++W+D  F V ++  G +S+S+++  
Subjt:  KTTNSTK----------------KKTKWVKE-----LPNLHSTVNYEKALTGCLKDRNIAWTSIDTVGASGGIAIIWNDYSFTVLEVIEGIFSLSIHLSL

Query:  VDGFSFWIIGVYDPNSSRDKKVFWRELADLQALCLPNWVLGDDFNVTRWTWEKSTITAPSRVMRTFNRFIESAALQDHPPL
         +G ++W+  VY P    D+   W EL  LQ+LCLPNW++  DFN+ RW  E +  +   R M  FN FI    L D PPL
Subjt:  VDGFSFWIIGVYDPNSSRDKKVFWRELADLQALCLPNWVLGDDFNVTRWTWEKSTITAPSRVMRTFNRFIESAALQDHPPL

KAA0057507.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]7.4e-3023.41Show/hide
Query:  SVSPLQPDKALLACEDEEQARTLAN--IKGWYKVGKYQVHFFPWSAETMLGKPKVPSYGGRIKVRNLPLDKWSIETFKEIGDKCGGYLETASKTLSRMDM
        S  P Q DKA+L    +      +N    GW  VG YQV F  W +        +PSYGG ++ R +PL  W+  TF+ IG  CGG+L+ A +T+    +
Subjt:  SVSPLQPDKALLACEDEEQARTLAN--IKGWYKVGKYQVHFFPWSAETMLGKPKVPSYGGRIKVRNLPLDKWSIETFKEIGDKCGGYLETASKTLSRMDM

Query:  MEIGIKVKENSMGFIPTEVHIPLSSC-NPIVVKIDPF---FVEDFNI-----------------GYIA------GIHGRIPAPLG-------ENNNPHAV
        ++  IKV+ N +GF+P  + I  +   N IV  + P    ++ + N+                  ++A      G     P P          N++ H++
Subjt:  MEIGIKVKENSMGFIPTEVHIPLSSC-NPIVVKIDPF---FVEDFNI-----------------GYIA------GIHGRIPAPLG-------ENNNPHAV

Query:  ----EDKENDYREEKDNP-------------RAAAIIRE------------------------GVLSSPCTT-------AMEDSSLPTPYRAIIQTASPP
            + K+N+  E + +P             +A  II +                        G+ S+   T       ++E S++   +          
Subjt:  ----EDKENDYREEKDNP-------------RAAAIIRE------------------------GVLSSPCTT-------AMEDSSLPTPYRAIIQTASPP

Query:  TICKLFESQHEQQPYIEDPIPLSIEEPNPLKAQLAMGIEETTLIDIE--VEKADTEDMETREN--------CVDPALYLPILFPWLTEHGMCIMPMPSRH
             +  + + Q   ED   LS++E      Q+ + ++   +  +E  ++  +   ++T  N          D A    +      + G       SR 
Subjt:  TICKLFESQHEQQPYIEDPIPLSIEEPNPLKAQLAMGIEETTLIDIE--VEKADTEDMETREN--------CVDPALYLPILFPWLTEHGMCIMPMPSRH

Query:  KTTNSTK----------------KKTKWVKE-----LPNLHSTVNYEKALTGCLKDRNIAWTSIDTVGASGGIAIIWNDYSFTVLEVIEGIFSLSIHLSL
            ++K                K   W+KE      P   + V         + D+N+       +G  GGI ++W+D +F V ++  G +S+S+++  
Subjt:  KTTNSTK----------------KKTKWVKE-----LPNLHSTVNYEKALTGCLKDRNIAWTSIDTVGASGGIAIIWNDYSFTVLEVIEGIFSLSIHLSL

Query:  VDGFSFWIIGVYDPNSSRDKKVFWRELADLQALCLPNWVLGDDFNVTRWTWEKSTITAPSRVMRTFNRFIESAALQDHPPL
         +G ++W+  VY P    D+   W EL  LQ+LCLPNW++  DFN+ RW  E +  +   R M  FN FI    L D PPL
Subjt:  VDGFSFWIIGVYDPNSSRDKKVFWRELADLQALCLPNWVLGDDFNVTRWTWEKSTITAPSRVMRTFNRFIESAALQDHPPL

TYK08190.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]7.4e-3023.41Show/hide
Query:  SVSPLQPDKALLACEDEEQARTLAN--IKGWYKVGKYQVHFFPWSAETMLGKPKVPSYGGRIKVRNLPLDKWSIETFKEIGDKCGGYLETASKTLSRMDM
        S  P Q DKA+L    +      +N    GW  VG YQV F  W +        +PSYGG ++ R +PL  W+  TF+ IG  CGG+L+ A +T+    +
Subjt:  SVSPLQPDKALLACEDEEQARTLAN--IKGWYKVGKYQVHFFPWSAETMLGKPKVPSYGGRIKVRNLPLDKWSIETFKEIGDKCGGYLETASKTLSRMDM

Query:  MEIGIKVKENSMGFIPTEVHIPLSSC-NPIVVKIDPF---FVEDFNI-----------------GYIA------GIHGRIPAPLG-------ENNNPHAV
        ++  IKV+ N +GF+P  + I  +   N IV  + P    ++ + N+                  ++A      G     P P          N++ H++
Subjt:  MEIGIKVKENSMGFIPTEVHIPLSSC-NPIVVKIDPF---FVEDFNI-----------------GYIA------GIHGRIPAPLG-------ENNNPHAV

Query:  ----EDKENDYREEKDNP-------------RAAAIIRE------------------------GVLSSPCTT-------AMEDSSLPTPYRAIIQTASPP
            + K+N+  E + +P             +A  II +                        G+ S+   T       ++E S++   +          
Subjt:  ----EDKENDYREEKDNP-------------RAAAIIRE------------------------GVLSSPCTT-------AMEDSSLPTPYRAIIQTASPP

Query:  TICKLFESQHEQQPYIEDPIPLSIEEPNPLKAQLAMGIEETTLIDIE--VEKADTEDMETREN--------CVDPALYLPILFPWLTEHGMCIMPMPSRH
             +  + + Q   ED   LS++E      Q+ + ++   +  +E  ++  +   ++T  N          D A    +      + G       SR 
Subjt:  TICKLFESQHEQQPYIEDPIPLSIEEPNPLKAQLAMGIEETTLIDIE--VEKADTEDMETREN--------CVDPALYLPILFPWLTEHGMCIMPMPSRH

Query:  KTTNSTK----------------KKTKWVKE-----LPNLHSTVNYEKALTGCLKDRNIAWTSIDTVGASGGIAIIWNDYSFTVLEVIEGIFSLSIHLSL
            ++K                K   W+KE      P   + V         + D+N+       +G  GGI ++W+D +F V ++  G +S+S+++  
Subjt:  KTTNSTK----------------KKTKWVKE-----LPNLHSTVNYEKALTGCLKDRNIAWTSIDTVGASGGIAIIWNDYSFTVLEVIEGIFSLSIHLSL

Query:  VDGFSFWIIGVYDPNSSRDKKVFWRELADLQALCLPNWVLGDDFNVTRWTWEKSTITAPSRVMRTFNRFIESAALQDHPPL
         +G ++W+  VY P    D+   W EL  LQ+LCLPNW++  DFN+ RW  E +  +   R M  FN FI    L D PPL
Subjt:  VDGFSFWIIGVYDPNSSRDKKVFWRELADLQALCLPNWVLGDDFNVTRWTWEKSTITAPSRVMRTFNRFIESAALQDHPPL

XP_022145142.1 uncharacterized protein LOC111014657 [Momordica charantia]2.6e-2748.33Show/hide
Query:  NIAWTSIDTVGASGGIAIIWNDYSFTVLEVIEGIFSLSIHLSLVDGFSFWIIGVYDPNSSRDKKVFWRELADLQALCLPNWVLGDDFNVTRWTWEKSTIT
        +IAW S+D  GASGGI ++W+  S + +EVI G FS+S+H  L D F++W+ GVY P   + +K+FW+EL DL  LC P W+LG+DFN+ RW+ E S+  
Subjt:  NIAWTSIDTVGASGGIAIIWNDYSFTVLEVIEGIFSLSIHLSLVDGFSFWIIGVYDPNSSRDKKVFWRELADLQALCLPNWVLGDDFNVTRWTWEKSTIT

Query:  APSRVMRTFNRFIESAALQD
         P   M  FN FI+ A L D
Subjt:  APSRVMRTFNRFIESAALQD

TrEMBL top hitse value%identityAlignment
A0A5A7TTA1 DUF4283 domain-containing protein5.0e-3224.56Show/hide
Query:  PLQPDKALLACEDEEQARTLANIKGWYKVGKYQVHFFPWSAETMLGKPKVPSYGGRIKVRNLPLDKWSIETFKEIGDKCGGYLETASKTLSRMDMMEIGI
        P   DKALL  +D+E A+ L    GW  VG + V F  WS         +PSYGG  + R +PL  W++ TF +IG+  GG+++ A ++++++++ E  I
Subjt:  PLQPDKALLACEDEEQARTLANIKGWYKVGKYQVHFFPWSAETMLGKPKVPSYGGRIKVRNLPLDKWSIETFKEIGDKCGGYLETASKTLSRMDMMEIGI

Query:  KVKENSMGFIPTEVHIPLSSCNPIVVKIDPFFVEDFNIGYIAGIHGRIPAPLGEN---NNPHAVE------------------------DKEND------
        KVKEN  GF+P  + I     +  +++        +       IHG       EN    NP+A +                           ND      
Subjt:  KVKENSMGFIPTEVHIPLSSCNPIVVKIDPFFVEDFNIGYIAGIHGRIPAPLGEN---NNPHAVE------------------------DKEND------

Query:  ----------------YREEKDNPRAAAIIREGVLSSPCTTAMEDSSL----------PTPYRAIIQTASPPTICKLFESQHEQQPYIEDPIPLSIEEPN
                        Y  + DN  ++  I++    S  T   +   +          P   +  +  +SP     LF +       ++   P+S  +  
Subjt:  ----------------YREEKDNPRAAAIIREGVLSSPCTTAMEDSSL----------PTPYRAIIQTASPPTICKLFESQHEQQPYIEDPIPLSIEEPN

Query:  PLKAQLAMGIE-------------ETTLIDIEVEKADTEDME---------------TRENCVDPALYLP---------ILFPWLTEHGMCIMPMPSRHK
            +    I+             ET+    + +K   +  E               T  +C +   Y+P         I+   L     C      + K
Subjt:  PLKAQLAMGIE-------------ETTLIDIEVEKADTEDME---------------TRENCVDPALYLP---------ILFPWLTEHGMCIMPMPSRHK

Query:  TTN----------STKKK-TKWVKELPNLHSTVNYEKALTGCLKDRNIAWTSIDTVGASGGIAIIWNDYSFTVLEVIEGIFSLSIHLSLVDGFSFWIIGV
          N          S K+K T W+KE  NL    ++         DR I   SI     + G+  +  D       VI+G FS+SI +   +G S+W+  +
Subjt:  TTN----------STKKK-TKWVKELPNLHSTVNYEKALTGCLKDRNIAWTSIDTVGASGGIAIIWNDYSFTVLEVIEGIFSLSIHLSLVDGFSFWIIGV

Query:  YDPNSSRDKKVFWRELADLQALCLPNWVLGDDFNVTRWTWEKSTITAPSRVMRTFNRFIESAALQDHPPL
        Y P   +++ +FW EL +L+++C P W+LG DFNV RW  E ST    S  M+ FN FI +  L D PPL
Subjt:  YDPNSSRDKKVFWRELADLQALCLPNWVLGDDFNVTRWTWEKSTITAPSRVMRTFNRFIESAALQDHPPL

A0A5A7US62 LINE-1 retrotransposable element ORF2 protein3.6e-3023.41Show/hide
Query:  SVSPLQPDKALLACEDEEQARTLAN--IKGWYKVGKYQVHFFPWSAETMLGKPKVPSYGGRIKVRNLPLDKWSIETFKEIGDKCGGYLETASKTLSRMDM
        S  P Q DKA+L    +      +N    GW  VG YQV F  W +        +PSYGG ++ R +PL  W+  TF+ IG  CGG+L+ A +T+    +
Subjt:  SVSPLQPDKALLACEDEEQARTLAN--IKGWYKVGKYQVHFFPWSAETMLGKPKVPSYGGRIKVRNLPLDKWSIETFKEIGDKCGGYLETASKTLSRMDM

Query:  MEIGIKVKENSMGFIPTEVHIPLSSC-NPIVVKIDPF---FVEDFNI-----------------GYIA------GIHGRIPAPLG-------ENNNPHAV
        ++  IKV+ N +GF+P  + I  +   N IV  + P    ++ + N+                  ++A      G     P P          N++ H++
Subjt:  MEIGIKVKENSMGFIPTEVHIPLSSC-NPIVVKIDPF---FVEDFNI-----------------GYIA------GIHGRIPAPLG-------ENNNPHAV

Query:  ----EDKENDYREEKDNP-------------RAAAIIRE------------------------GVLSSPCTT-------AMEDSSLPTPYRAIIQTASPP
            + K+N+  E + +P             +A  II +                        G+ S+   T       ++E S++   +          
Subjt:  ----EDKENDYREEKDNP-------------RAAAIIRE------------------------GVLSSPCTT-------AMEDSSLPTPYRAIIQTASPP

Query:  TICKLFESQHEQQPYIEDPIPLSIEEPNPLKAQLAMGIEETTLIDIE--VEKADTEDMETREN--------CVDPALYLPILFPWLTEHGMCIMPMPSRH
             +  + + Q   ED   LS++E      Q+ + ++   +  +E  ++  +   ++T  N          D A    +      + G       SR 
Subjt:  TICKLFESQHEQQPYIEDPIPLSIEEPNPLKAQLAMGIEETTLIDIE--VEKADTEDMETREN--------CVDPALYLPILFPWLTEHGMCIMPMPSRH

Query:  KTTNSTK----------------KKTKWVKE-----LPNLHSTVNYEKALTGCLKDRNIAWTSIDTVGASGGIAIIWNDYSFTVLEVIEGIFSLSIHLSL
            ++K                K   W+KE      P   + V         + D+N+       +G  GGI ++W+D +F V ++  G +S+S+++  
Subjt:  KTTNSTK----------------KKTKWVKE-----LPNLHSTVNYEKALTGCLKDRNIAWTSIDTVGASGGIAIIWNDYSFTVLEVIEGIFSLSIHLSL

Query:  VDGFSFWIIGVYDPNSSRDKKVFWRELADLQALCLPNWVLGDDFNVTRWTWEKSTITAPSRVMRTFNRFIESAALQDHPPL
         +G ++W+  VY P    D+   W EL  LQ+LCLPNW++  DFN+ RW  E +  +   R M  FN FI    L D PPL
Subjt:  VDGFSFWIIGVYDPNSSRDKKVFWRELADLQALCLPNWVLGDDFNVTRWTWEKSTITAPSRVMRTFNRFIESAALQDHPPL

A0A5D3BKT8 LINE-1 retrotransposable element ORF2 protein3.9e-2923.41Show/hide
Query:  SVSPLQPDKALLACEDEEQARTLAN--IKGWYKVGKYQVHFFPWSAETMLGKPKVPSYGGRIKVRNLPLDKWSIETFKEIGDKCGGYLETASKTLSRMDM
        S  P Q DKA+L    +      +N    GW  VG YQV F  W +        +PSYGG ++ R +PL  W+  TF+ IG  CGG+L+ A +T+    +
Subjt:  SVSPLQPDKALLACEDEEQARTLAN--IKGWYKVGKYQVHFFPWSAETMLGKPKVPSYGGRIKVRNLPLDKWSIETFKEIGDKCGGYLETASKTLSRMDM

Query:  MEIGIKVKENSMGFIPTEVHIPLSSC-NPIVVKIDPF---FVEDFNI-----------------GYIA------GIHGRIPAPLG-------ENNNPHAV
        ++  IKV+ N  GF+P  + I  +   N IV  + P    ++ + N+                  ++A      G     P P          N++ H++
Subjt:  MEIGIKVKENSMGFIPTEVHIPLSSC-NPIVVKIDPF---FVEDFNI-----------------GYIA------GIHGRIPAPLG-------ENNNPHAV

Query:  ----EDKENDYREEKDNP-------------RAAAIIRE------------------------GVLSSPCTT-------AMEDSSLPTPYRAIIQTASPP
            + K+N+  E + +P             +A  II +                        G+ S+   T       ++E S++   +          
Subjt:  ----EDKENDYREEKDNP-------------RAAAIIRE------------------------GVLSSPCTT-------AMEDSSLPTPYRAIIQTASPP

Query:  TICKLFESQHEQQPYIEDPIPLSIEEPNPLKAQLAMGIEETTLIDIE--VEKADTEDMETREN--------CVDPALYLPILFPWLTEHGMCIMPMPSRH
             +  + + Q   ED   LS++E      Q+ + ++   +  +E  ++  +   ++T  N          D A    +      + G       SR 
Subjt:  TICKLFESQHEQQPYIEDPIPLSIEEPNPLKAQLAMGIEETTLIDIE--VEKADTEDMETREN--------CVDPALYLPILFPWLTEHGMCIMPMPSRH

Query:  KTTNSTK----------------KKTKWVKE-----LPNLHSTVNYEKALTGCLKDRNIAWTSIDTVGASGGIAIIWNDYSFTVLEVIEGIFSLSIHLSL
            ++K                K   W+KE      P   + V    +    + D+N+       +G  GGI ++W+D  F V ++  G +S+S+++  
Subjt:  KTTNSTK----------------KKTKWVKE-----LPNLHSTVNYEKALTGCLKDRNIAWTSIDTVGASGGIAIIWNDYSFTVLEVIEGIFSLSIHLSL

Query:  VDGFSFWIIGVYDPNSSRDKKVFWRELADLQALCLPNWVLGDDFNVTRWTWEKSTITAPSRVMRTFNRFIESAALQDHPPL
         +G ++W+  VY P    D+   W EL  LQ+LCLPNW++  DFN+ RW  E +  +   R M  FN FI    L D PPL
Subjt:  VDGFSFWIIGVYDPNSSRDKKVFWRELADLQALCLPNWVLGDDFNVTRWTWEKSTITAPSRVMRTFNRFIESAALQDHPPL

A0A5D3CA17 LINE-1 retrotransposable element ORF2 protein3.6e-3023.41Show/hide
Query:  SVSPLQPDKALLACEDEEQARTLAN--IKGWYKVGKYQVHFFPWSAETMLGKPKVPSYGGRIKVRNLPLDKWSIETFKEIGDKCGGYLETASKTLSRMDM
        S  P Q DKA+L    +      +N    GW  VG YQV F  W +        +PSYGG ++ R +PL  W+  TF+ IG  CGG+L+ A +T+    +
Subjt:  SVSPLQPDKALLACEDEEQARTLAN--IKGWYKVGKYQVHFFPWSAETMLGKPKVPSYGGRIKVRNLPLDKWSIETFKEIGDKCGGYLETASKTLSRMDM

Query:  MEIGIKVKENSMGFIPTEVHIPLSSC-NPIVVKIDPF---FVEDFNI-----------------GYIA------GIHGRIPAPLG-------ENNNPHAV
        ++  IKV+ N +GF+P  + I  +   N IV  + P    ++ + N+                  ++A      G     P P          N++ H++
Subjt:  MEIGIKVKENSMGFIPTEVHIPLSSC-NPIVVKIDPF---FVEDFNI-----------------GYIA------GIHGRIPAPLG-------ENNNPHAV

Query:  ----EDKENDYREEKDNP-------------RAAAIIRE------------------------GVLSSPCTT-------AMEDSSLPTPYRAIIQTASPP
            + K+N+  E + +P             +A  II +                        G+ S+   T       ++E S++   +          
Subjt:  ----EDKENDYREEKDNP-------------RAAAIIRE------------------------GVLSSPCTT-------AMEDSSLPTPYRAIIQTASPP

Query:  TICKLFESQHEQQPYIEDPIPLSIEEPNPLKAQLAMGIEETTLIDIE--VEKADTEDMETREN--------CVDPALYLPILFPWLTEHGMCIMPMPSRH
             +  + + Q   ED   LS++E      Q+ + ++   +  +E  ++  +   ++T  N          D A    +      + G       SR 
Subjt:  TICKLFESQHEQQPYIEDPIPLSIEEPNPLKAQLAMGIEETTLIDIE--VEKADTEDMETREN--------CVDPALYLPILFPWLTEHGMCIMPMPSRH

Query:  KTTNSTK----------------KKTKWVKE-----LPNLHSTVNYEKALTGCLKDRNIAWTSIDTVGASGGIAIIWNDYSFTVLEVIEGIFSLSIHLSL
            ++K                K   W+KE      P   + V         + D+N+       +G  GGI ++W+D +F V ++  G +S+S+++  
Subjt:  KTTNSTK----------------KKTKWVKE-----LPNLHSTVNYEKALTGCLKDRNIAWTSIDTVGASGGIAIIWNDYSFTVLEVIEGIFSLSIHLSL

Query:  VDGFSFWIIGVYDPNSSRDKKVFWRELADLQALCLPNWVLGDDFNVTRWTWEKSTITAPSRVMRTFNRFIESAALQDHPPL
         +G ++W+  VY P    D+   W EL  LQ+LCLPNW++  DFN+ RW  E +  +   R M  FN FI    L D PPL
Subjt:  VDGFSFWIIGVYDPNSSRDKKVFWRELADLQALCLPNWVLGDDFNVTRWTWEKSTITAPSRVMRTFNRFIESAALQDHPPL

A0A6J1CVN2 uncharacterized protein LOC1110146571.3e-2748.33Show/hide
Query:  NIAWTSIDTVGASGGIAIIWNDYSFTVLEVIEGIFSLSIHLSLVDGFSFWIIGVYDPNSSRDKKVFWRELADLQALCLPNWVLGDDFNVTRWTWEKSTIT
        +IAW S+D  GASGGI ++W+  S + +EVI G FS+S+H  L D F++W+ GVY P   + +K+FW+EL DL  LC P W+LG+DFN+ RW+ E S+  
Subjt:  NIAWTSIDTVGASGGIAIIWNDYSFTVLEVIEGIFSLSIHLSLVDGFSFWIIGVYDPNSSRDKKVFWRELADLQALCLPNWVLGDDFNVTRWTWEKSTIT

Query:  APSRVMRTFNRFIESAALQD
         P   M  FN FI+ A L D
Subjt:  APSRVMRTFNRFIESAALQD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAACTGGCATGATATCATGCGAGCATTACAGCAGAACCTCAGCCTTCTCCTCAGTTAGCCCCCTTCAGCCAGACAAAGCCCTCCTTGCTTGTGAGGATGAAGAACA
AGCTCGGACCTTAGCCAATATCAAAGGATGGTACAAGGTTGGAAAATACCAAGTCCATTTCTTCCCATGGAGTGCGGAAACTATGCTAGGCAAGCCAAAGGTTCCGTCGT
ATGGTGGAAGGATCAAAGTCAGAAACCTTCCCCTAGACAAATGGTCCATAGAAACTTTCAAGGAAATCGGAGATAAATGTGGGGGATACTTGGAAACTGCCAGCAAAACT
CTATCTCGTATGGACATGATGGAGATAGGCATTAAGGTTAAAGAAAATAGCATGGGCTTCATCCCAACAGAAGTCCACATCCCTTTGTCCTCTTGCAACCCCATAGTGGT
TAAAATCGACCCCTTTTTTGTTGAAGACTTCAACATAGGCTACATAGCCGGTATCCATGGCAGAATTCCAGCTCCTCTAGGAGAAAACAACAATCCACACGCCGTCGAAG
ATAAAGAAAATGACTATAGGGAAGAAAAGGACAATCCACGCGCCGCTGCTATAATTCGGGAAGGAGTGTTGTCATCTCCCTGCACTACCGCTATGGAGGATTCCTCGTTA
CCGACCCCCTATAGAGCTATTATACAAACAGCTTCCCCACCAACCATTTGCAAACTTTTCGAGTCACAACATGAACAACAACCATATATCGAGGACCCCATCCCACTGAG
TATTGAAGAACCAAATCCTCTAAAAGCTCAGCTAGCTATGGGTATAGAGGAAACAACTCTCATTGATATAGAAGTAGAAAAAGCGGATACAGAGGACATGGAAACAAGGG
AAAATTGTGTGGACCCAGCCTTATATTTACCCATATTATTTCCATGGTTGACCGAACATGGTATGTGCATTATGCCAATGCCAAGCAGACACAAAACCACGAATTCCACA
AAGAAGAAGACAAAATGGGTTAAAGAACTACCGAATTTGCACTCCACAGTTAATTATGAGAAGGCTCTAACAGGTTGCCTTAAGGACAGGAACATTGCTTGGACCTCCAT
TGATACGGTTGGTGCTTCTGGTGGCATTGCTATCATATGGAATGATTACTCTTTCACTGTGTTGGAAGTTATTGAAGGTATATTCTCGTTATCCATCCACCTCTCTCTTG
TTGATGGGTTCTCCTTTTGGATTATAGGGGTTTATGACCCAAATTCTTCTCGGGACAAGAAAGTATTCTGGAGAGAGTTGGCCGACCTTCAAGCTCTTTGTCTACCCAAC
TGGGTATTGGGAGATGATTTTAACGTTACCCGTTGGACTTGGGAGAAGTCTACCATCACAGCTCCTTCCCGAGTCATGAGGACATTTAACCGCTTTATTGAATCAGCTGC
TTTACAGGACCATCCCCCTCTCCAATGGCAAATTTACTTGGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATAACTGGCATGATATCATGCGAGCATTACAGCAGAACCTCAGCCTTCTCCTCAGTTAGCCCCCTTCAGCCAGACAAAGCCCTCCTTGCTTGTGAGGATGAAGAACA
AGCTCGGACCTTAGCCAATATCAAAGGATGGTACAAGGTTGGAAAATACCAAGTCCATTTCTTCCCATGGAGTGCGGAAACTATGCTAGGCAAGCCAAAGGTTCCGTCGT
ATGGTGGAAGGATCAAAGTCAGAAACCTTCCCCTAGACAAATGGTCCATAGAAACTTTCAAGGAAATCGGAGATAAATGTGGGGGATACTTGGAAACTGCCAGCAAAACT
CTATCTCGTATGGACATGATGGAGATAGGCATTAAGGTTAAAGAAAATAGCATGGGCTTCATCCCAACAGAAGTCCACATCCCTTTGTCCTCTTGCAACCCCATAGTGGT
TAAAATCGACCCCTTTTTTGTTGAAGACTTCAACATAGGCTACATAGCCGGTATCCATGGCAGAATTCCAGCTCCTCTAGGAGAAAACAACAATCCACACGCCGTCGAAG
ATAAAGAAAATGACTATAGGGAAGAAAAGGACAATCCACGCGCCGCTGCTATAATTCGGGAAGGAGTGTTGTCATCTCCCTGCACTACCGCTATGGAGGATTCCTCGTTA
CCGACCCCCTATAGAGCTATTATACAAACAGCTTCCCCACCAACCATTTGCAAACTTTTCGAGTCACAACATGAACAACAACCATATATCGAGGACCCCATCCCACTGAG
TATTGAAGAACCAAATCCTCTAAAAGCTCAGCTAGCTATGGGTATAGAGGAAACAACTCTCATTGATATAGAAGTAGAAAAAGCGGATACAGAGGACATGGAAACAAGGG
AAAATTGTGTGGACCCAGCCTTATATTTACCCATATTATTTCCATGGTTGACCGAACATGGTATGTGCATTATGCCAATGCCAAGCAGACACAAAACCACGAATTCCACA
AAGAAGAAGACAAAATGGGTTAAAGAACTACCGAATTTGCACTCCACAGTTAATTATGAGAAGGCTCTAACAGGTTGCCTTAAGGACAGGAACATTGCTTGGACCTCCAT
TGATACGGTTGGTGCTTCTGGTGGCATTGCTATCATATGGAATGATTACTCTTTCACTGTGTTGGAAGTTATTGAAGGTATATTCTCGTTATCCATCCACCTCTCTCTTG
TTGATGGGTTCTCCTTTTGGATTATAGGGGTTTATGACCCAAATTCTTCTCGGGACAAGAAAGTATTCTGGAGAGAGTTGGCCGACCTTCAAGCTCTTTGTCTACCCAAC
TGGGTATTGGGAGATGATTTTAACGTTACCCGTTGGACTTGGGAGAAGTCTACCATCACAGCTCCTTCCCGAGTCATGAGGACATTTAACCGCTTTATTGAATCAGCTGC
TTTACAGGACCATCCCCCTCTCCAATGGCAAATTTACTTGGTTTAG
Protein sequenceShow/hide protein sequence
MITGMISCEHYSRTSAFSSVSPLQPDKALLACEDEEQARTLANIKGWYKVGKYQVHFFPWSAETMLGKPKVPSYGGRIKVRNLPLDKWSIETFKEIGDKCGGYLETASKT
LSRMDMMEIGIKVKENSMGFIPTEVHIPLSSCNPIVVKIDPFFVEDFNIGYIAGIHGRIPAPLGENNNPHAVEDKENDYREEKDNPRAAAIIREGVLSSPCTTAMEDSSL
PTPYRAIIQTASPPTICKLFESQHEQQPYIEDPIPLSIEEPNPLKAQLAMGIEETTLIDIEVEKADTEDMETRENCVDPALYLPILFPWLTEHGMCIMPMPSRHKTTNST
KKKTKWVKELPNLHSTVNYEKALTGCLKDRNIAWTSIDTVGASGGIAIIWNDYSFTVLEVIEGIFSLSIHLSLVDGFSFWIIGVYDPNSSRDKKVFWRELADLQALCLPN
WVLGDDFNVTRWTWEKSTITAPSRVMRTFNRFIESAALQDHPPLQWQIYLV