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Spg002492 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg002492
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionSART-1 family protein DOT2
Genome locationscaffold6:4840580..4841780
RNA-Seq ExpressionSpg002492
SyntenySpg002492
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0009791 - post-embryonic development (biological process)
GO:0048367 - shoot system development (biological process)
GO:0099402 - plant organ development (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR005011 - SNU66/SART1 family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039246.1 SART-1 family protein DOT2 isoform X2 [Cucumis melo var. makuwa]7.2e-1457.14Show/hide
Query:  ESFRQLSHKFH----GKMKQEKRIKQYQEELKLKQMKNADTPSSTVKDPFSFELVFCLVFWFLPIQFLIVLWFSLMFSSQTSDPRSGFANHENDLRGRLV
        ESFRQLSHKFH    GKMKQEKR+KQYQEELKLKQMKNADTPS +V+     +         L   +L++     +   QTSDPRSGFA  E DL G L 
Subjt:  ESFRQLSHKFH----GKMKQEKRIKQYQEELKLKQMKNADTPSSTVKDPFSFELVFCLVFWFLPIQFLIVLWFSLMFSSQTSDPRSGFANHENDLRGRLV

Query:  TPMFG
        TPM G
Subjt:  TPMFG

KAG7030981.1 SART-1 family protein DOT2, partial [Cucurbita argyrosperma subsp. argyrosperma]7.2e-1457.14Show/hide
Query:  ESFRQLSHKFH----GKMKQEKRIKQYQEELKLKQMKNADTPSSTVKDPFSFELVFCLVFWFLPIQFLIVLWFSLMFSSQTSDPRSGFANHENDLRGRLV
        ESFRQLSHKFH    GKMKQEKR+KQYQEELKLKQMKNADTPS +V+     +         L   +L++     +   QTSDPRSGFA  E DL G L 
Subjt:  ESFRQLSHKFH----GKMKQEKRIKQYQEELKLKQMKNADTPSSTVKDPFSFELVFCLVFWFLPIQFLIVLWFSLMFSSQTSDPRSGFANHENDLRGRLV

Query:  TPMFG
        TPM G
Subjt:  TPMFG

XP_016902433.1 PREDICTED: SART-1 family protein DOT2 isoform X1 [Cucumis melo]7.2e-1457.14Show/hide
Query:  ESFRQLSHKFH----GKMKQEKRIKQYQEELKLKQMKNADTPSSTVKDPFSFELVFCLVFWFLPIQFLIVLWFSLMFSSQTSDPRSGFANHENDLRGRLV
        ESFRQLSHKFH    GKMKQEKR+KQYQEELKLKQMKNADTPS +V+     +         L   +L++     +   QTSDPRSGFA  E DL G L 
Subjt:  ESFRQLSHKFH----GKMKQEKRIKQYQEELKLKQMKNADTPSSTVKDPFSFELVFCLVFWFLPIQFLIVLWFSLMFSSQTSDPRSGFANHENDLRGRLV

Query:  TPMFG
        TPM G
Subjt:  TPMFG

XP_022942374.1 SART-1 family protein DOT2 [Cucurbita moschata]7.2e-1457.14Show/hide
Query:  ESFRQLSHKFH----GKMKQEKRIKQYQEELKLKQMKNADTPSSTVKDPFSFELVFCLVFWFLPIQFLIVLWFSLMFSSQTSDPRSGFANHENDLRGRLV
        ESFRQLSHKFH    GKMKQEKR+KQYQEELKLKQMKNADTPS +V+     +         L   +L++     +   QTSDPRSGFA  E DL G L 
Subjt:  ESFRQLSHKFH----GKMKQEKRIKQYQEELKLKQMKNADTPSSTVKDPFSFELVFCLVFWFLPIQFLIVLWFSLMFSSQTSDPRSGFANHENDLRGRLV

Query:  TPMFG
        TPM G
Subjt:  TPMFG

XP_038890025.1 SART-1 family protein DOT2 [Benincasa hispida]7.2e-1457.14Show/hide
Query:  ESFRQLSHKFH----GKMKQEKRIKQYQEELKLKQMKNADTPSSTVKDPFSFELVFCLVFWFLPIQFLIVLWFSLMFSSQTSDPRSGFANHENDLRGRLV
        ESFRQLSHKFH    GKMKQEKR+KQYQEELKLKQMKNADTPS +V+     +         L   +L++     +   QTSDPRSGFA  E DL G L 
Subjt:  ESFRQLSHKFH----GKMKQEKRIKQYQEELKLKQMKNADTPSSTVKDPFSFELVFCLVFWFLPIQFLIVLWFSLMFSSQTSDPRSGFANHENDLRGRLV

Query:  TPMFG
        TPM G
Subjt:  TPMFG

TrEMBL top hitse value%identityAlignment
A0A0A0KXY6 Uncharacterized protein3.5e-1457.14Show/hide
Query:  ESFRQLSHKFH----GKMKQEKRIKQYQEELKLKQMKNADTPSSTVKDPFSFELVFCLVFWFLPIQFLIVLWFSLMFSSQTSDPRSGFANHENDLRGRLV
        ESFRQLSHKFH    GKMKQEKR+KQYQEELKLKQMKNADTPS +V+     +         L   +L++     +   QTSDPRSGFA  E DL G L 
Subjt:  ESFRQLSHKFH----GKMKQEKRIKQYQEELKLKQMKNADTPSSTVKDPFSFELVFCLVFWFLPIQFLIVLWFSLMFSSQTSDPRSGFANHENDLRGRLV

Query:  TPMFG
        TPM G
Subjt:  TPMFG

A0A1S3CAS5 SART-1 family protein DOT2 isoform X23.5e-1457.14Show/hide
Query:  ESFRQLSHKFH----GKMKQEKRIKQYQEELKLKQMKNADTPSSTVKDPFSFELVFCLVFWFLPIQFLIVLWFSLMFSSQTSDPRSGFANHENDLRGRLV
        ESFRQLSHKFH    GKMKQEKR+KQYQEELKLKQMKNADTPS +V+     +         L   +L++     +   QTSDPRSGFA  E DL G L 
Subjt:  ESFRQLSHKFH----GKMKQEKRIKQYQEELKLKQMKNADTPSSTVKDPFSFELVFCLVFWFLPIQFLIVLWFSLMFSSQTSDPRSGFANHENDLRGRLV

Query:  TPMFG
        TPM G
Subjt:  TPMFG

A0A5D3BNU7 SART-1 family protein DOT2 isoform X23.5e-1457.14Show/hide
Query:  ESFRQLSHKFH----GKMKQEKRIKQYQEELKLKQMKNADTPSSTVKDPFSFELVFCLVFWFLPIQFLIVLWFSLMFSSQTSDPRSGFANHENDLRGRLV
        ESFRQLSHKFH    GKMKQEKR+KQYQEELKLKQMKNADTPS +V+     +         L   +L++     +   QTSDPRSGFA  E DL G L 
Subjt:  ESFRQLSHKFH----GKMKQEKRIKQYQEELKLKQMKNADTPSSTVKDPFSFELVFCLVFWFLPIQFLIVLWFSLMFSSQTSDPRSGFANHENDLRGRLV

Query:  TPMFG
        TPM G
Subjt:  TPMFG

A0A6J1FR42 SART-1 family protein DOT23.5e-1457.14Show/hide
Query:  ESFRQLSHKFH----GKMKQEKRIKQYQEELKLKQMKNADTPSSTVKDPFSFELVFCLVFWFLPIQFLIVLWFSLMFSSQTSDPRSGFANHENDLRGRLV
        ESFRQLSHKFH    GKMKQEKR+KQYQEELKLKQMKNADTPS +V+     +         L   +L++     +   QTSDPRSGFA  E DL G L 
Subjt:  ESFRQLSHKFH----GKMKQEKRIKQYQEELKLKQMKNADTPSSTVKDPFSFELVFCLVFWFLPIQFLIVLWFSLMFSSQTSDPRSGFANHENDLRGRLV

Query:  TPMFG
        TPM G
Subjt:  TPMFG

A0A6J1IPE4 SART-1 family protein DOT23.5e-1457.14Show/hide
Query:  ESFRQLSHKFH----GKMKQEKRIKQYQEELKLKQMKNADTPSSTVKDPFSFELVFCLVFWFLPIQFLIVLWFSLMFSSQTSDPRSGFANHENDLRGRLV
        ESFRQLSHKFH    GKMKQEKR+KQYQEELKLKQMKNADTPS +V+     +         L   +L++     +   QTSDPRSGFA  E DL G L 
Subjt:  ESFRQLSHKFH----GKMKQEKRIKQYQEELKLKQMKNADTPSSTVKDPFSFELVFCLVFWFLPIQFLIVLWFSLMFSSQTSDPRSGFANHENDLRGRLV

Query:  TPMFG
        TPM G
Subjt:  TPMFG

SwissProt top hitse value%identityAlignment
O43290 U4/U6.U5 tri-snRNP-associated protein 11.1e-0456.52Show/hide
Query:  ESFRQLSHKFH----GKMKQEKRIKQYQEELKLKQMKNADTPSSTV
        E+FRQLSH+FH    GKMK E+R+K+  EE  LK+M ++DTP  TV
Subjt:  ESFRQLSHKFH----GKMKQEKRIKQYQEELKLKQMKNADTPSSTV

Q5XIW8 U4/U6.U5 tri-snRNP-associated protein 11.1e-0456.52Show/hide
Query:  ESFRQLSHKFH----GKMKQEKRIKQYQEELKLKQMKNADTPSSTV
        E+FRQLSH+FH    GKMK E+R+K+  EE  LK+M ++DTP  TV
Subjt:  ESFRQLSHKFH----GKMKQEKRIKQYQEELKLKQMKNADTPSSTV

Q9LFE0 SART-1 family protein DOT21.1e-1443.94Show/hide
Query:  ESFRQLSHKFH----GKMKQEKRIKQYQEELKLKQMKNADTPSSTVKDPFSFELVFCLVFWFLPIQFLIVLWFSLMFSSQTSDPRSGFANHENDLRGRLV
        E+FR LSHKFH    GKMK+EKR+KQYQEELKLKQMKN+DTPS +V+     +         L   +L++     +   QTSDP+SGFA  E D+ G L 
Subjt:  ESFRQLSHKFH----GKMKQEKRIKQYQEELKLKQMKNADTPSSTVKDPFSFELVFCLVFWFLPIQFLIVLWFSLMFSSQTSDPRSGFANHENDLRGRLV

Query:  TPMFG---TNYSIRLSHLLKPSDVDEKFQREK
        TPM G     + + +    +P + D   +R K
Subjt:  TPMFG---TNYSIRLSHLLKPSDVDEKFQREK

Q9Z315 U4/U6.U5 tri-snRNP-associated protein 11.1e-0456.52Show/hide
Query:  ESFRQLSHKFH----GKMKQEKRIKQYQEELKLKQMKNADTPSSTV
        E+FRQLSH+FH    GKMK E+R+K+  EE  LK+M ++DTP  TV
Subjt:  ESFRQLSHKFH----GKMKQEKRIKQYQEELKLKQMKNADTPSSTV

Arabidopsis top hitse value%identityAlignment
AT5G16780.1 SART-1 family8.2e-1643.94Show/hide
Query:  ESFRQLSHKFH----GKMKQEKRIKQYQEELKLKQMKNADTPSSTVKDPFSFELVFCLVFWFLPIQFLIVLWFSLMFSSQTSDPRSGFANHENDLRGRLV
        E+FR LSHKFH    GKMK+EKR+KQYQEELKLKQMKN+DTPS +V+     +         L   +L++     +   QTSDP+SGFA  E D+ G L 
Subjt:  ESFRQLSHKFH----GKMKQEKRIKQYQEELKLKQMKNADTPSSTVKDPFSFELVFCLVFWFLPIQFLIVLWFSLMFSSQTSDPRSGFANHENDLRGRLV

Query:  TPMFG---TNYSIRLSHLLKPSDVDEKFQREK
        TPM G     + + +    +P + D   +R K
Subjt:  TPMFG---TNYSIRLSHLLKPSDVDEKFQREK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTAAATTAGCAAGCAGAACGATGGGAAGCAAGAGAGCAAGAGTAAGAGGAGAATCAGAGAATAGAATTCAGGATCCCTTCTTCAGTGACGAAGAAGAGTTTAAATA
CTTTTCCTGCCTTTGGGTTTCTAGGCTTTCAGAGAAGATTTGGGCTGAACTAGGTGGAACTGGGGCGTCTAGGGGCACCAAGGACCAAATGGAGGCGGAAGAACTCGGCC
CGCGCAAGCGGGCCGAGCAGGGGTTGGGACAAGGCCCGACCCCTCCGGCCTTGGCCCGACCCTCTGGCCTGTTTCCTCTGAAGTCCAACTTTTGGTCCTGTTTTCGAGCC
CATGCCGTGCTGTCCTTGCCCATTCCTTACGCTTTGGAGTGGTTCAAAATTACCTACAACAAGTGTAATGGGAAGATAGTAGATTTCTATTCTCATTTGTGCCTTTTAAC
TGTACTAAATGACTCCAAATGGGAGTCATTTCGCCAACTTTCTCATAAGTTCCATGGCAAAATGAAGCAAGAAAAACGCATTAAACAATACCAAGAAGAGTTGAAGTTGA
AGCAGATGAAGAATGCAGATACTCCTTCAAGCACAGTTAAGGACCCCTTTTCATTTGAACTAGTATTTTGCCTTGTGTTTTGGTTTTTACCCATTCAGTTTCTGATTGTT
TTGTGGTTTTCTTTAATGTTTTCTAGCCAAACAAGTGATCCAAGAAGTGGTTTTGCTAACCATGAAAATGATCTCCGAGGGCGGCTCGTGACACCCATGTTTGGGACAAA
TTATTCAATAAGGCTGTCACATCTTTTAAAGCCGTCAGATGTTGATGAAAAATTTCAAAGAGAGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTAAATTAGCAAGCAGAACGATGGGAAGCAAGAGAGCAAGAGTAAGAGGAGAATCAGAGAATAGAATTCAGGATCCCTTCTTCAGTGACGAAGAAGAGTTTAAATA
CTTTTCCTGCCTTTGGGTTTCTAGGCTTTCAGAGAAGATTTGGGCTGAACTAGGTGGAACTGGGGCGTCTAGGGGCACCAAGGACCAAATGGAGGCGGAAGAACTCGGCC
CGCGCAAGCGGGCCGAGCAGGGGTTGGGACAAGGCCCGACCCCTCCGGCCTTGGCCCGACCCTCTGGCCTGTTTCCTCTGAAGTCCAACTTTTGGTCCTGTTTTCGAGCC
CATGCCGTGCTGTCCTTGCCCATTCCTTACGCTTTGGAGTGGTTCAAAATTACCTACAACAAGTGTAATGGGAAGATAGTAGATTTCTATTCTCATTTGTGCCTTTTAAC
TGTACTAAATGACTCCAAATGGGAGTCATTTCGCCAACTTTCTCATAAGTTCCATGGCAAAATGAAGCAAGAAAAACGCATTAAACAATACCAAGAAGAGTTGAAGTTGA
AGCAGATGAAGAATGCAGATACTCCTTCAAGCACAGTTAAGGACCCCTTTTCATTTGAACTAGTATTTTGCCTTGTGTTTTGGTTTTTACCCATTCAGTTTCTGATTGTT
TTGTGGTTTTCTTTAATGTTTTCTAGCCAAACAAGTGATCCAAGAAGTGGTTTTGCTAACCATGAAAATGATCTCCGAGGGCGGCTCGTGACACCCATGTTTGGGACAAA
TTATTCAATAAGGCTGTCACATCTTTTAAAGCCGTCAGATGTTGATGAAAAATTTCAAAGAGAGAAATGA
Protein sequenceShow/hide protein sequence
MLKLASRTMGSKRARVRGESENRIQDPFFSDEEEFKYFSCLWVSRLSEKIWAELGGTGASRGTKDQMEAEELGPRKRAEQGLGQGPTPPALARPSGLFPLKSNFWSCFRA
HAVLSLPIPYALEWFKITYNKCNGKIVDFYSHLCLLTVLNDSKWESFRQLSHKFHGKMKQEKRIKQYQEELKLKQMKNADTPSSTVKDPFSFELVFCLVFWFLPIQFLIV
LWFSLMFSSQTSDPRSGFANHENDLRGRLVTPMFGTNYSIRLSHLLKPSDVDEKFQREK