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Spg002547 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg002547
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold6:1617221..1619243
RNA-Seq ExpressionSpg002547
SyntenySpg002547
Gene Ontology termsGO:0009409 - response to cold (biological process)
GO:0042752 - regulation of circadian rhythm (biological process)
InterPro domainsIPR044678 - Cold-regulated protein 27/28


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140781.1 uncharacterized protein LOC101217506 [Cucumis sativus]1.8e-4985.37Show/hide
Query:  MDSHVQFSQTGPFWTNEKHMHFLNSMEASFVRSMFQNRLHHRRRLRLDRLLPDTADSTLDSPHKDTKNHTTSGGGRIDGRSSRRSRRISSLPHTSIQDQV
        M+SHVQF+QTGP WTNEKHMHFLNS+EASFVRSMFQNR  HRR LRLDRLLPDTADSTLDSPH  TKNH TSG  RI+GRS+RRSRRISS P+TS QDQV
Subjt:  MDSHVQFSQTGPFWTNEKHMHFLNSMEASFVRSMFQNRLHHRRRLRLDRLLPDTADSTLDSPHKDTKNHTTSGGGRIDGRSSRRSRRISSLPHTSIQDQV

Query:  VPQMEKRAVEDEDERDHPMSPVN
        VPQMEKRAVEDEDERDHPMSP+N
Subjt:  VPQMEKRAVEDEDERDHPMSPVN

XP_022141184.1 uncharacterized protein LOC111011640 [Momordica charantia]2.0e-4882.93Show/hide
Query:  MDSHVQFSQTGPFWTNEKHMHFLNSMEASFVRSMFQNRLHHRRRLRLDRLLPDTADSTLDSPHKDTKNHTTSGGGRIDGRSSRRSRRISSLPHTSIQDQV
        M+SHVQF++TG  WTNEKHMHFLNSMEASFVRSMF+NR H RRRLRLDR LPDT+DSTLDSP KD KNH TSG   IDGRSS RSR  SSLPHTS QDQV
Subjt:  MDSHVQFSQTGPFWTNEKHMHFLNSMEASFVRSMFQNRLHHRRRLRLDRLLPDTADSTLDSPHKDTKNHTTSGGGRIDGRSSRRSRRISSLPHTSIQDQV

Query:  VPQMEKRAVEDEDERDHPMSPVN
        VPQMEKRAVEDEDERDHPMSP+N
Subjt:  VPQMEKRAVEDEDERDHPMSPVN

XP_023552558.1 uncharacterized protein LOC111810184 isoform X1 [Cucurbita pepo subsp. pepo]5.7e-4884.55Show/hide
Query:  MDSHVQFSQTGPFWTNEKHMHFLNSMEASFVRSMFQNRLHHRRRLRLDRLLPDTADSTLDSPHKDTKNHTTSGGGRIDGRSSRRSRRISSLPHTSIQDQV
        M+SHVQFS+T PFWTNEKHMHFLNSMEASFVRSMF+NR +HRR LRLDR L DTADSTLDSPHK+ K H+ S G R+DGRSSRRSRRI SLPHTSIQDQV
Subjt:  MDSHVQFSQTGPFWTNEKHMHFLNSMEASFVRSMFQNRLHHRRRLRLDRLLPDTADSTLDSPHKDTKNHTTSGGGRIDGRSSRRSRRISSLPHTSIQDQV

Query:  VPQMEKRAVEDEDERDHPMSPVN
        VPQME+RAVEDEDERDHPMSPVN
Subjt:  VPQMEKRAVEDEDERDHPMSPVN

XP_038882732.1 uncharacterized protein LOC120073889 isoform X1 [Benincasa hispida]1.9e-5187.9Show/hide
Query:  MDSHVQFSQTGPFWTNEKHMHFLNSMEASFVRSMFQNRLHHRRRLRLDRLLPDTADSTLDSPHK-DTKNHTTSGGGRIDGRSSRRSRRISSLPHTSIQDQ
        M+SHVQFS+TGPFWTNEKHMHFLNSMEASFV+SMF+NR HHRRRLRLDR LPDTADSTLDSP K DTKNH TS   RI+GRSSRRSRRISSLPHTS QDQ
Subjt:  MDSHVQFSQTGPFWTNEKHMHFLNSMEASFVRSMFQNRLHHRRRLRLDRLLPDTADSTLDSPHK-DTKNHTTSGGGRIDGRSSRRSRRISSLPHTSIQDQ

Query:  VVPQMEKRAVEDEDERDHPMSPVN
        VVPQ+EKRAVEDEDERDHPMSPVN
Subjt:  VVPQMEKRAVEDEDERDHPMSPVN

XP_038882735.1 uncharacterized protein LOC120073889 isoform X2 [Benincasa hispida]2.1e-5087.9Show/hide
Query:  MDSHVQFSQTGPFWTNEKHMHFLNSMEASFVRSMFQNRLHHRRRLRLDRLLPDTADSTLDSPHK-DTKNHTTSGGGRIDGRSSRRSRRISSLPHTSIQDQ
        M+SHVQFS+TGPFWTNEKHMHFLNSMEASFV+SMF+NR HHRRRLRLDR LPDTADSTLDSP K DTKNH TS   RI+GRSSRRSRRISSLPHTS QDQ
Subjt:  MDSHVQFSQTGPFWTNEKHMHFLNSMEASFVRSMFQNRLHHRRRLRLDRLLPDTADSTLDSPHK-DTKNHTTSGGGRIDGRSSRRSRRISSLPHTSIQDQ

Query:  VVPQMEKRAVEDEDERDHPMSPVN
        VVPQ+EKRAVEDEDERDHPMSPVN
Subjt:  VVPQMEKRAVEDEDERDHPMSPVN

TrEMBL top hitse value%identityAlignment
A0A0A0L5V0 Uncharacterized protein8.6e-5085.37Show/hide
Query:  MDSHVQFSQTGPFWTNEKHMHFLNSMEASFVRSMFQNRLHHRRRLRLDRLLPDTADSTLDSPHKDTKNHTTSGGGRIDGRSSRRSRRISSLPHTSIQDQV
        M+SHVQF+QTGP WTNEKHMHFLNS+EASFVRSMFQNR  HRR LRLDRLLPDTADSTLDSPH  TKNH TSG  RI+GRS+RRSRRISS P+TS QDQV
Subjt:  MDSHVQFSQTGPFWTNEKHMHFLNSMEASFVRSMFQNRLHHRRRLRLDRLLPDTADSTLDSPHKDTKNHTTSGGGRIDGRSSRRSRRISSLPHTSIQDQV

Query:  VPQMEKRAVEDEDERDHPMSPVN
        VPQMEKRAVEDEDERDHPMSP+N
Subjt:  VPQMEKRAVEDEDERDHPMSPVN

A0A1S3AYV4 uncharacterized protein LOC1034840633.1e-4782.93Show/hide
Query:  MDSHVQFSQTGPFWTNEKHMHFLNSMEASFVRSMFQNRLHHRRRLRLDRLLPDTADSTLDSPHKDTKNHTTSGGGRIDGRSSRRSRRISSLPHTSIQDQV
        M+SHVQF+QTGP WTNEKHMHFLNSMEASFVRSMFQNR  HRRRLRLDRLLPDTADSTLDSP   TKNH TSG  R++GRS+RRSRR SS P++S QDQV
Subjt:  MDSHVQFSQTGPFWTNEKHMHFLNSMEASFVRSMFQNRLHHRRRLRLDRLLPDTADSTLDSPHKDTKNHTTSGGGRIDGRSSRRSRRISSLPHTSIQDQV

Query:  VPQMEKRAVEDEDERDHPMSPVN
        VPQMEK AVEDEDERDHPMSP+N
Subjt:  VPQMEKRAVEDEDERDHPMSPVN

A0A6J1CHV7 uncharacterized protein LOC1110116409.5e-4982.93Show/hide
Query:  MDSHVQFSQTGPFWTNEKHMHFLNSMEASFVRSMFQNRLHHRRRLRLDRLLPDTADSTLDSPHKDTKNHTTSGGGRIDGRSSRRSRRISSLPHTSIQDQV
        M+SHVQF++TG  WTNEKHMHFLNSMEASFVRSMF+NR H RRRLRLDR LPDT+DSTLDSP KD KNH TSG   IDGRSS RSR  SSLPHTS QDQV
Subjt:  MDSHVQFSQTGPFWTNEKHMHFLNSMEASFVRSMFQNRLHHRRRLRLDRLLPDTADSTLDSPHKDTKNHTTSGGGRIDGRSSRRSRRISSLPHTSIQDQV

Query:  VPQMEKRAVEDEDERDHPMSPVN
        VPQMEKRAVEDEDERDHPMSP+N
Subjt:  VPQMEKRAVEDEDERDHPMSPVN

A0A6J1E5I2 uncharacterized protein LOC111430892 isoform X15.2e-4782.93Show/hide
Query:  MDSHVQFSQTGPFWTNEKHMHFLNSMEASFVRSMFQNRLHHRRRLRLDRLLPDTADSTLDSPHKDTKNHTTSGGGRIDGRSSRRSRRISSLPHTSIQDQV
        M+SHVQFS+T PFWTNEKHMHFLNSMEASFVRSMF+NR ++RRRL+LDR L DTADSTLDSP K+ K H+ S G R+DGRSSRRSRRI SLPHTSIQDQV
Subjt:  MDSHVQFSQTGPFWTNEKHMHFLNSMEASFVRSMFQNRLHHRRRLRLDRLLPDTADSTLDSPHKDTKNHTTSGGGRIDGRSSRRSRRISSLPHTSIQDQV

Query:  VPQMEKRAVEDEDERDHPMSPVN
        VPQME+RAVEDEDERDHPMSPVN
Subjt:  VPQMEKRAVEDEDERDHPMSPVN

A0A6J1JBA6 uncharacterized protein LOC111482903 isoform X18.0e-4883.74Show/hide
Query:  MDSHVQFSQTGPFWTNEKHMHFLNSMEASFVRSMFQNRLHHRRRLRLDRLLPDTADSTLDSPHKDTKNHTTSGGGRIDGRSSRRSRRISSLPHTSIQDQV
        M+SHVQFS+T PFWTNEKHMHFLNSMEASFVRSMF+NR +HRRRLRLDR L DTADSTLDSP K+ K H+ S G R+DGRSSRRSRRI SLPHTSIQDQV
Subjt:  MDSHVQFSQTGPFWTNEKHMHFLNSMEASFVRSMFQNRLHHRRRLRLDRLLPDTADSTLDSPHKDTKNHTTSGGGRIDGRSSRRSRRISSLPHTSIQDQV

Query:  VPQMEKRAVEDEDERDHPMSPVN
        VPQME+RAVEDEDERDHP+SPVN
Subjt:  VPQMEKRAVEDEDERDHPMSPVN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTCTCACGTGCAATTCAGCCAAACGGGGCCGTTTTGGACCAATGAGAAGCACATGCACTTCTTGAATTCCATGGAAGCTTCTTTTGTCCGATCAATGTTCCAAAA
TCGCCTCCATCATCGCCGCCGTCTGCGCCTGGACCGCCTCCTGCCGGACACCGCCGACTCAACCCTAGATTCGCCTCACAAGGACACAAAAAACCATACTACCTCCGGAG
GTGGCAGAATCGACGGTAGATCTAGCAGGAGATCGAGGAGGATATCATCTCTACCGCACACTTCAATTCAAGATCAGGTGGTCCCACAAATGGAAAAGAGAGCAGTTGAG
GATGAAGATGAGAGAGACCATCCCATGTCACCTGTCAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACTCTCACGTGCAATTCAGCCAAACGGGGCCGTTTTGGACCAATGAGAAGCACATGCACTTCTTGAATTCCATGGAAGCTTCTTTTGTCCGATCAATGTTCCAAAA
TCGCCTCCATCATCGCCGCCGTCTGCGCCTGGACCGCCTCCTGCCGGACACCGCCGACTCAACCCTAGATTCGCCTCACAAGGACACAAAAAACCATACTACCTCCGGAG
GTGGCAGAATCGACGGTAGATCTAGCAGGAGATCGAGGAGGATATCATCTCTACCGCACACTTCAATTCAAGATCAGGTGGTCCCACAAATGGAAAAGAGAGCAGTTGAG
GATGAAGATGAGAGAGACCATCCCATGTCACCTGTCAACTGA
Protein sequenceShow/hide protein sequence
MDSHVQFSQTGPFWTNEKHMHFLNSMEASFVRSMFQNRLHHRRRLRLDRLLPDTADSTLDSPHKDTKNHTTSGGGRIDGRSSRRSRRISSLPHTSIQDQVVPQMEKRAVE
DEDERDHPMSPVN