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Spg002576 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg002576
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTubby-like F-box protein
Genome locationscaffold6:5090366..5092183
RNA-Seq ExpressionSpg002576
SyntenySpg002576
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650509.1 hypothetical protein Csa_010751 [Cucumis sativus]6.9e-1684.21Show/hide
Query:  MEKSAAAILCFLLLSAAAVTVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGP
        ME+SA AILC LLLS A VTVSADAADCIDGCFTACVQKD+R MQRCE KC IKCGP
Subjt:  MEKSAAAILCFLLLSAAAVTVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGP
KAG5016052.1 hypothetical protein JHK85_022188 [Glycine max]3.0e-1157.14Show/hide
Query:  MEKSAAAILCFLLLSAAAVTVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDSEVED
        M+K  AA++ FLL+S    +V  DAADC+DGC TACVQ D+RL  RCE KC I+CGPDS +++
Subjt:  MEKSAAAILCFLLLSAAAVTVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDSEVED
KAG6600340.1 hypothetical protein SDJN03_05573, partial [Cucurbita argyrosperma subsp. sororia]2.7e-2083.33Show/hide
Query:  MEKSAA----AILCFLLLSAAAVTVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDSEVE
        M+KS A    AILCF+LLSAAA TVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPD++ E
Subjt:  MEKSAA----AILCFLLLSAAAVTVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDSEVE
XP_008456107.1 PREDICTED: uncharacterized protein LOC103496144 isoform X2 [Cucumis melo]6.7e-1982.09Show/hide
Query:  MEKS---AAAILCFLLLSA-AAVTVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDSEVED
        MEKS   AAAILC LLLSA A VTVSADAADCID CFTACVQKDTR+MQRCEGKCRIKCGPD++V++
Subjt:  MEKS---AAAILCFLLLSA-AAVTVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDSEVED
XP_016901882.1 PREDICTED: uncharacterized protein LOC103496144 isoform X1 [Cucumis melo]5.3e-1671.05Show/hide
Query:  MEKS---AAAILCFLLLSA-AAVTVSADAADCIDGCFTACVQKD---------TRLMQRCEGKCRIKCGPDSEVED
        MEKS   AAAILC LLLSA A VTVSADAADCID CFTACVQKD          R+MQRCEGKCRIKCGPD++V++
Subjt:  MEKS---AAAILCFLLLSA-AAVTVSADAADCIDGCFTACVQKD---------TRLMQRCEGKCRIKCGPDSEVED
TrEMBL top hitse value%identityAlignment
A0A0A0LC00 Uncharacterized protein9.4e-1980Show/hide
Query:  MEKSAAAILCFLLLSAAAVTVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDSEVEDIT
        ME+SA AILC LLLS A VTVSADAADCIDGCFTACVQKD+R MQRCE KC IKCGPD++VE+ T
Subjt:  MEKSAAAILCFLLLSAAAVTVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDSEVEDIT
A0A1S3C2J8 uncharacterized protein LOC103496144 isoform X23.2e-1982.09Show/hide
Query:  MEKS---AAAILCFLLLSA-AAVTVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDSEVED
        MEKS   AAAILC LLLSA A VTVSADAADCID CFTACVQKDTR+MQRCEGKCRIKCGPD++V++
Subjt:  MEKS---AAAILCFLLLSA-AAVTVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDSEVED
A0A1S4E0W4 uncharacterized protein LOC103496144 isoform X12.6e-1671.05Show/hide
Query:  MEKS---AAAILCFLLLSA-AAVTVSADAADCIDGCFTACVQKD---------TRLMQRCEGKCRIKCGPDSEVED
        MEKS   AAAILC LLLSA A VTVSADAADCID CFTACVQKD          R+MQRCEGKCRIKCGPD++V++
Subjt:  MEKS---AAAILCFLLLSA-AAVTVSADAADCIDGCFTACVQKD---------TRLMQRCEGKCRIKCGPDSEVED
A0A445JGK3 Uncharacterized protein1.4e-1157.14Show/hide
Query:  MEKSAAAILCFLLLSAAAVTVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDSEVED
        M+K  AA++ FLL+S    +V  DAADC+DGC TACVQ D+RL  RCE KC I+CGPDS +++
Subjt:  MEKSAAAILCFLLLSAAAVTVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDSEVED
A0A6A4NXS4 Uncharacterized protein2.5e-1157.81Show/hide
Query:  MEKSAAAILCFLLLSAAAV-TVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDSEVED
        M+K   AI+  L +  + + TV++DA+DC+D C TACVQ+DTRLMQRC+ KC+IKCGPDS+VE+
Subjt:  MEKSAAAILCFLLLSAAAV-TVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDSEVED
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G25275.1 unknown protein1.6e-0741.54Show/hide
Query:  MEKSAAAILCFLLLSA--AAVTVSADA----ADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDS
        M+K    +   L++ A  +++ + A+A     DC DGC TACVQ+D R   RC+ KC I+CGPD+
Subjt:  MEKSAAAILCFLLLSA--AAVTVSADA----ADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDS
AT1G25275.2 unknown protein6.2e-0740Show/hide
Query:  MEKSAAAILCFLLLSA--AAVTVSADA----ADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDS
        M+K    +   L++ A  +++ + A+A     DC DGC TACVQ+D     RC+ KC I+CGPD+
Subjt:  MEKSAAAILCFLLLSA--AAVTVSADA----ADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDS
AT1G25275.3 unknown protein4.8e-0739.71Show/hide
Query:  MEKSAAAILCFLLLSA--AAVTVSADA----ADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDSEVE
        M+K    +   L++ A  +++ + A+A     DC DGC TACVQ+D R   RC+ KC I+CGP    E
Subjt:  MEKSAAAILCFLLLSA--AAVTVSADA----ADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDSEVE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAATCTGCGGCGGCGATTTTGTGCTTCTTGCTACTTTCTGCGGCGGCGGTGACGGTTTCAGCCGACGCCGCCGACTGCATCGACGGCTGTTTCACCGCCTGTGT
TCAGAAAGATACGAGGCTGATGCAGCGTTGTGAGGGCAAGTGTAGAATTAAATGCGGTCCAGATAGTGAAGTTGAAGATATTACTCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAATCTGCGGCGGCGATTTTGTGCTTCTTGCTACTTTCTGCGGCGGCGGTGACGGTTTCAGCCGACGCCGCCGACTGCATCGACGGCTGTTTCACCGCCTGTGT
TCAGAAAGATACGAGGCTGATGCAGCGTTGTGAGGGCAAGTGTAGAATTAAATGCGGTCCAGATAGTGAAGTTGAAGATATTACTCGTTGA
Protein sequenceShow/hide protein sequence
MEKSAAAILCFLLLSAAAVTVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDSEVEDITR