; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg002589 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg002589
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCyclin
Genome locationscaffold6:3013204..3015657
RNA-Seq ExpressionSpg002589
SyntenySpg002589
Gene Ontology termsGO:0000079 - regulation of cyclin-dependent protein serine/threonine kinase activity (biological process)
GO:0034968 - histone lysine methylation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0008270 - zinc ion binding (molecular function)
GO:0018024 - histone-lysine N-methyltransferase activity (molecular function)
GO:0019901 - protein kinase binding (molecular function)
InterPro domainsIPR012389 - Cyclin P/U
IPR013763 - Cyclin-like
IPR013922 - Cyclin PHO80-like
IPR036915 - Cyclin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600208.1 Cyclin-U4-1, partial [Cucurbita argyrosperma subsp. sororia]1.4e-4877.14Show/hide
Query:  MADQLDHHQNQMVPIPKVITFLSSLLQRVSESNDQSLELQSVAKVSAFHGLTRPTISIQSYLERIFKYANCSPSCFVVAYVYLDRFVQRQPSLPIDSFNV
        MAD LDHH    VPIPKVITFLSSLLQRVSESNDQS +L S AK SAFHGLT+PTISIQ+YLERIFKYANCSPSCFVVAYVYLDR  QR PSLPID FNV
Subjt:  MADQLDHHQNQMVPIPKVITFLSSLLQRVSESNDQSLELQSVAKVSAFHGLTRPTISIQSYLERIFKYANCSPSCFVVAYVYLDRFVQRQPSLPIDSFNV

Query:  HRLLITSVLVSAKFLDDL---ESSVFRLGGVSLNSLVLLE
        HRLLITSVLVSAKFLDDL    +   ++GG+S   + LLE
Subjt:  HRLLITSVLVSAKFLDDL---ESSVFRLGGVSLNSLVLLE

OMO94810.1 hypothetical protein CCACVL1_05802 [Corchorus capsularis]1.0e-4171.76Show/hide
Query:  NQMVPIPKVITFLSSLLQRVSESNDQSLELQSVAKVSAFHGLTRPTISIQSYLERIFKYANCSPSCFVVAYVYLDRFVQRQPSLPIDSFNVHRLLITSVL
        N+   +PKVITFLSSLLQRV+ESND S   QS  K+S FHGLTRPTISI++YLERIFKYANCSPSCFVVAYVYLDRFVQ QPSLP++SFNVHRLLITSVL
Subjt:  NQMVPIPKVITFLSSLLQRVSESNDQSLELQSVAKVSAFHGLTRPTISIQSYLERIFKYANCSPSCFVVAYVYLDRFVQRQPSLPIDSFNVHRLLITSVL

Query:  VSAKFLDDL---ESSVFRLGGVSLNSLVLLE
        VSAKF+DD+    +   ++GG+S   + LLE
Subjt:  VSAKFLDDL---ESSVFRLGGVSLNSLVLLE

XP_022941693.1 cyclin-U4-1-like [Cucurbita moschata]5.9e-5079.29Show/hide
Query:  MADQLDHHQNQMVPIPKVITFLSSLLQRVSESNDQSLELQSVAKVSAFHGLTRPTISIQSYLERIFKYANCSPSCFVVAYVYLDRFVQRQPSLPIDSFNV
        MAD LDHH    VPIPKVITFLSSLLQRVSESNDQS EL S AKVSAFHGLT+PTISIQ+YLERIFKYANCSPSCFVVAYVYLDR  QR PSLPIDSFNV
Subjt:  MADQLDHHQNQMVPIPKVITFLSSLLQRVSESNDQSLELQSVAKVSAFHGLTRPTISIQSYLERIFKYANCSPSCFVVAYVYLDRFVQRQPSLPIDSFNV

Query:  HRLLITSVLVSAKFLDDL---ESSVFRLGGVSLNSLVLLE
        HRLLITSVLVSAKFLDDL    +   ++GG+S   + LLE
Subjt:  HRLLITSVLVSAKFLDDL---ESSVFRLGGVSLNSLVLLE

XP_022992955.1 cyclin-U4-1-like [Cucurbita maxima]1.3e-4979.29Show/hide
Query:  MADQLDHHQNQMVPIPKVITFLSSLLQRVSESNDQSLELQSVAKVSAFHGLTRPTISIQSYLERIFKYANCSPSCFVVAYVYLDRFVQRQPSLPIDSFNV
        MAD LDH     VPIPKVITFLSSLLQRVSESNDQS EL S AKVSAFHGLT+PTISIQ+YLERIFKYANCSPSCFVVAYVYLDR VQR PSLPIDSFNV
Subjt:  MADQLDHHQNQMVPIPKVITFLSSLLQRVSESNDQSLELQSVAKVSAFHGLTRPTISIQSYLERIFKYANCSPSCFVVAYVYLDRFVQRQPSLPIDSFNV

Query:  HRLLITSVLVSAKFLDDL---ESSVFRLGGVSLNSLVLLE
        HRLLITSVLVSAKFLDDL    +   ++GG+S   + LLE
Subjt:  HRLLITSVLVSAKFLDDL---ESSVFRLGGVSLNSLVLLE

XP_023526236.1 cyclin-U4-1-like [Cucurbita pepo subsp. pepo]1.7e-4978.57Show/hide
Query:  MADQLDHHQNQMVPIPKVITFLSSLLQRVSESNDQSLELQSVAKVSAFHGLTRPTISIQSYLERIFKYANCSPSCFVVAYVYLDRFVQRQPSLPIDSFNV
        MAD LDHH    VPIPKVITFLSSLLQRVSESNDQS +L S AKVSAFHGLT+PTISIQ+YLERIFKYANCSPSCFVVAYVYLDR  QR PSLPIDSFNV
Subjt:  MADQLDHHQNQMVPIPKVITFLSSLLQRVSESNDQSLELQSVAKVSAFHGLTRPTISIQSYLERIFKYANCSPSCFVVAYVYLDRFVQRQPSLPIDSFNV

Query:  HRLLITSVLVSAKFLDDL---ESSVFRLGGVSLNSLVLLE
        HRLLITSVLVSAKFLDDL    +   ++GG+S   + LLE
Subjt:  HRLLITSVLVSAKFLDDL---ESSVFRLGGVSLNSLVLLE

TrEMBL top hitse value%identityAlignment
A0A061G061 Cyclin1.9e-4175.4Show/hide
Query:  IPKVITFLSSLLQRVSESNDQSLELQSVAKVSAFHGLTRPTISIQSYLERIFKYANCSPSCFVVAYVYLDRFVQRQPSLPIDSFNVHRLLITSVLVSAKF
        +PKVITFLSSLLQRV+ESND    LQS   +S FHGLTRPTISI+SYLERIFKYANCSPSCFVVAYVYLDRFVQ QPSLPI+SFNVHRLLITSVLVSAKF
Subjt:  IPKVITFLSSLLQRVSESNDQSLELQSVAKVSAFHGLTRPTISIQSYLERIFKYANCSPSCFVVAYVYLDRFVQRQPSLPIDSFNVHRLLITSVLVSAKF

Query:  LDDL---ESSVFRLGGVSLNSLVLLE
        +DD+    +   ++GG+S   L LLE
Subjt:  LDDL---ESSVFRLGGVSLNSLVLLE

A0A1R3JJ39 Uncharacterized protein4.9e-4271.76Show/hide
Query:  NQMVPIPKVITFLSSLLQRVSESNDQSLELQSVAKVSAFHGLTRPTISIQSYLERIFKYANCSPSCFVVAYVYLDRFVQRQPSLPIDSFNVHRLLITSVL
        N+   +PKVITFLSSLLQRV+ESND S   QS  K+S FHGLTRPTISI++YLERIFKYANCSPSCFVVAYVYLDRFVQ QPSLP++SFNVHRLLITSVL
Subjt:  NQMVPIPKVITFLSSLLQRVSESNDQSLELQSVAKVSAFHGLTRPTISIQSYLERIFKYANCSPSCFVVAYVYLDRFVQRQPSLPIDSFNVHRLLITSVL

Query:  VSAKFLDDL---ESSVFRLGGVSLNSLVLLE
        VSAKF+DD+    +   ++GG+S   + LLE
Subjt:  VSAKFLDDL---ESSVFRLGGVSLNSLVLLE

A0A6J1AHH9 Cyclin1.9e-4174.6Show/hide
Query:  IPKVITFLSSLLQRVSESNDQSLELQSVAKVSAFHGLTRPTISIQSYLERIFKYANCSPSCFVVAYVYLDRFVQRQPSLPIDSFNVHRLLITSVLVSAKF
        +PKVITFLSSLLQRV+ESND S   QS  K+S FHGLTRPTISI+SYLERIFKYANCSPSCFVVAYVYLDRFVQ QPSLPI+ FNVHRLLITSVLVSAKF
Subjt:  IPKVITFLSSLLQRVSESNDQSLELQSVAKVSAFHGLTRPTISIQSYLERIFKYANCSPSCFVVAYVYLDRFVQRQPSLPIDSFNVHRLLITSVLVSAKF

Query:  LDDL---ESSVFRLGGVSLNSLVLLE
        +DD+    +   ++GG+S   + LLE
Subjt:  LDDL---ESSVFRLGGVSLNSLVLLE

A0A6J1FSU2 Cyclin2.8e-5079.29Show/hide
Query:  MADQLDHHQNQMVPIPKVITFLSSLLQRVSESNDQSLELQSVAKVSAFHGLTRPTISIQSYLERIFKYANCSPSCFVVAYVYLDRFVQRQPSLPIDSFNV
        MAD LDHH    VPIPKVITFLSSLLQRVSESNDQS EL S AKVSAFHGLT+PTISIQ+YLERIFKYANCSPSCFVVAYVYLDR  QR PSLPIDSFNV
Subjt:  MADQLDHHQNQMVPIPKVITFLSSLLQRVSESNDQSLELQSVAKVSAFHGLTRPTISIQSYLERIFKYANCSPSCFVVAYVYLDRFVQRQPSLPIDSFNV

Query:  HRLLITSVLVSAKFLDDL---ESSVFRLGGVSLNSLVLLE
        HRLLITSVLVSAKFLDDL    +   ++GG+S   + LLE
Subjt:  HRLLITSVLVSAKFLDDL---ESSVFRLGGVSLNSLVLLE

A0A6J1JX61 Cyclin6.3e-5079.29Show/hide
Query:  MADQLDHHQNQMVPIPKVITFLSSLLQRVSESNDQSLELQSVAKVSAFHGLTRPTISIQSYLERIFKYANCSPSCFVVAYVYLDRFVQRQPSLPIDSFNV
        MAD LDH     VPIPKVITFLSSLLQRVSESNDQS EL S AKVSAFHGLT+PTISIQ+YLERIFKYANCSPSCFVVAYVYLDR VQR PSLPIDSFNV
Subjt:  MADQLDHHQNQMVPIPKVITFLSSLLQRVSESNDQSLELQSVAKVSAFHGLTRPTISIQSYLERIFKYANCSPSCFVVAYVYLDRFVQRQPSLPIDSFNV

Query:  HRLLITSVLVSAKFLDDL---ESSVFRLGGVSLNSLVLLE
        HRLLITSVLVSAKFLDDL    +   ++GG+S   + LLE
Subjt:  HRLLITSVLVSAKFLDDL---ESSVFRLGGVSLNSLVLLE

SwissProt top hitse value%identityAlignment
O80513 Cyclin-U4-12.2e-3968Show/hide
Query:  KVITFLSSLLQRVSESNDQSLELQSVA-KVSAFHGLTRPTISIQSYLERIFKYANCSPSCFVVAYVYLDRFVQRQPSLPIDSFNVHRLLITSVLVSAKFL
        K+I FLSSLL+RV+ESND +  + + + +VS FHGL+RPTI+IQSYLERIFKYANCSPSCFVVAYVYLDRF  RQPSLPI+SFNVHRLLITSV+V+AKFL
Subjt:  KVITFLSSLLQRVSESNDQSLELQSVA-KVSAFHGLTRPTISIQSYLERIFKYANCSPSCFVVAYVYLDRFVQRQPSLPIDSFNVHRLLITSVLVSAKFL

Query:  DDL---ESSVFRLGGVSLNSLVLLE
        DDL    +   ++GG+S   +  LE
Subjt:  DDL---ESSVFRLGGVSLNSLVLLE

Q7XC35 Cyclin-P4-17.3e-3558.46Show/hide
Query:  IPKVITFLSSLLQRVSESNDQSLELQSV----AKVSAFHGLTRPTISIQSYLERIFKYANCSPSCFVVAYVYLDRFVQRQPSLPIDSFNVHRLLITSVLV
        +P+V+  LSSLLQRV+E ND +    +V    A VSAF GLT+P ISI  YLERIF++ANCSPSC+VVAY+YLDRF++R+P+L +DSFNVHRLLITSVL 
Subjt:  IPKVITFLSSLLQRVSESNDQSLELQSV----AKVSAFHGLTRPTISIQSYLERIFKYANCSPSCFVVAYVYLDRFVQRQPSLPIDSFNVHRLLITSVLV

Query:  SAKFLDDL---ESSVFRLGGVSLNSLVLLE
        + KF+DD+    +   R+GG+SL  +  LE
Subjt:  SAKFLDDL---ESSVFRLGGVSLNSLVLLE

Q9FKF6 Cyclin-U4-34.3e-3555.78Show/hide
Query:  MADQLD---HHQNQMVPI----PKVITFLSSLLQRVSESNDQSLELQSVAKVSAFHGLTRPTISIQSYLERIFKYANCSPSCFVVAYVYLDRFVQRQPSL
        MADQ++    +Q+   P+    P V+T +S LLQRVSE+ND    L    K S+F G+T+P+ISI+SYLERIF+YANCS SC++VAY+YLDRFV++QP L
Subjt:  MADQLD---HHQNQMVPI----PKVITFLSSLLQRVSESNDQSLELQSVAKVSAFHGLTRPTISIQSYLERIFKYANCSPSCFVVAYVYLDRFVQRQPSL

Query:  PIDSFNVHRLLITSVLVSAKFLDDLESS---VFRLGGVSLNSLVLLE
        PI+SFNVHRL+ITSVLVSAKF+DDL  +     ++GG+S   + +LE
Subjt:  PIDSFNVHRLLITSVLVSAKFLDDLESS---VFRLGGVSLNSLVLLE

Q9LJ45 Cyclin-U1-14.1e-2243.31Show/hide
Query:  PKVITFLSSLLQRVSESND-QSLELQSVAK-VSAFHGLTRPTISIQSYLERIFKYANCSPSCFVVAYVYLDRFVQRQPSLPIDSFNVHRLLITSVLVSAK
        P+V+T +S +++++   N+  + + +   K + AFHG+  P+ISI  YLERI+KY  CSP+CFVV YVY+DR   + P   + S NVHRLL+T V+++AK
Subjt:  PKVITFLSSLLQRVSESND-QSLELQSVAK-VSAFHGLTRPTISIQSYLERIFKYANCSPSCFVVAYVYLDRFVQRQPSLPIDSFNVHRLLITSVLVSAK

Query:  FLDDLESS---VFRLGGVSLNSLVLLE
         LDD+  +     R+GGVS   L  +E
Subjt:  FLDDLESS---VFRLGGVSLNSLVLLE

Q9LY16 Cyclin-U4-21.3e-3657.53Show/hide
Query:  MADQLD----HHQNQMVPI-PKVITFLSSLLQRVSESNDQ-SLELQSVAKVSAFHGLTRPTISIQSYLERIFKYANCSPSCFVVAYVYLDRFVQRQPSLP
        MA Q+D    H Q  M  I P VIT +SSLLQRVSE+ND  S   +   ++SAF+ +T+P+ISI+SY+ERIFKYA+CS SC++VAY+YLDRF+Q+QP LP
Subjt:  MADQLD----HHQNQMVPI-PKVITFLSSLLQRVSESNDQ-SLELQSVAKVSAFHGLTRPTISIQSYLERIFKYANCSPSCFVVAYVYLDRFVQRQPSLP

Query:  IDSFNVHRLLITSVLVSAKFLDDL---ESSVFRLGGVSLNSLVLLE
        IDS NVHRL+ITSVLVSAKF+DDL    +   ++GG++   + LLE
Subjt:  IDSFNVHRLLITSVLVSAKFLDDL---ESSVFRLGGVSLNSLVLLE

Arabidopsis top hitse value%identityAlignment
AT2G44740.1 cyclin p4;11.5e-4068Show/hide
Query:  KVITFLSSLLQRVSESNDQSLELQSVA-KVSAFHGLTRPTISIQSYLERIFKYANCSPSCFVVAYVYLDRFVQRQPSLPIDSFNVHRLLITSVLVSAKFL
        K+I FLSSLL+RV+ESND +  + + + +VS FHGL+RPTI+IQSYLERIFKYANCSPSCFVVAYVYLDRF  RQPSLPI+SFNVHRLLITSV+V+AKFL
Subjt:  KVITFLSSLLQRVSESNDQSLELQSVA-KVSAFHGLTRPTISIQSYLERIFKYANCSPSCFVVAYVYLDRFVQRQPSLPIDSFNVHRLLITSVLVSAKFL

Query:  DDL---ESSVFRLGGVSLNSLVLLE
        DDL    +   ++GG+S   +  LE
Subjt:  DDL---ESSVFRLGGVSLNSLVLLE

AT2G45080.1 cyclin p3;16.8e-2040.3Show/hide
Query:  HQNQMVPIPKVITFLSSLLQRVSESNDQ-SLELQSVAKVSAFHGLTRPTISIQSYLERIFKYANCSPSCFVVAYVYLDRFVQRQPSLPIDSFNVHRLLIT
        +Q+    +P VI+ LSSL++R    N++ S       K   F     P ++IQSYLERIF+Y    PS +VVAYVY+DRF Q      I   NVHRLLIT
Subjt:  HQNQMVPIPKVITFLSSLLQRVSESNDQ-SLELQSVAKVSAFHGLTRPTISIQSYLERIFKYANCSPSCFVVAYVYLDRFVQRQPSLPIDSFNVHRLLIT

Query:  SVLVSAKFLDDL--ESSVF-RLGGVSLNSLVLLE
        ++++++K+++D+  ++S F ++GG+    L  LE
Subjt:  SVLVSAKFLDDL--ESSVF-RLGGVSLNSLVLLE

AT3G21870.1 cyclin p2;12.9e-2343.31Show/hide
Query:  PKVITFLSSLLQRVSESND-QSLELQSVAK-VSAFHGLTRPTISIQSYLERIFKYANCSPSCFVVAYVYLDRFVQRQPSLPIDSFNVHRLLITSVLVSAK
        P+V+T +S +++++   N+  + + +   K + AFHG+  P+ISI  YLERI+KY  CSP+CFVV YVY+DR   + P   + S NVHRLL+T V+++AK
Subjt:  PKVITFLSSLLQRVSESND-QSLELQSVAK-VSAFHGLTRPTISIQSYLERIFKYANCSPSCFVVAYVYLDRFVQRQPSLPIDSFNVHRLLITSVLVSAK

Query:  FLDDLESS---VFRLGGVSLNSLVLLE
         LDD+  +     R+GGVS   L  +E
Subjt:  FLDDLESS---VFRLGGVSLNSLVLLE

AT5G07450.1 cyclin p4;39.4e-3857.53Show/hide
Query:  MADQLD----HHQNQMVPI-PKVITFLSSLLQRVSESNDQ-SLELQSVAKVSAFHGLTRPTISIQSYLERIFKYANCSPSCFVVAYVYLDRFVQRQPSLP
        MA Q+D    H Q  M  I P VIT +SSLLQRVSE+ND  S   +   ++SAF+ +T+P+ISI+SY+ERIFKYA+CS SC++VAY+YLDRF+Q+QP LP
Subjt:  MADQLD----HHQNQMVPI-PKVITFLSSLLQRVSESNDQ-SLELQSVAKVSAFHGLTRPTISIQSYLERIFKYANCSPSCFVVAYVYLDRFVQRQPSLP

Query:  IDSFNVHRLLITSVLVSAKFLDDL---ESSVFRLGGVSLNSLVLLE
        IDS NVHRL+ITSVLVSAKF+DDL    +   ++GG++   + LLE
Subjt:  IDSFNVHRLLITSVLVSAKFLDDL---ESSVFRLGGVSLNSLVLLE

AT5G61650.1 CYCLIN P4;23.0e-3655.78Show/hide
Query:  MADQLD---HHQNQMVPI----PKVITFLSSLLQRVSESNDQSLELQSVAKVSAFHGLTRPTISIQSYLERIFKYANCSPSCFVVAYVYLDRFVQRQPSL
        MADQ++    +Q+   P+    P V+T +S LLQRVSE+ND    L    K S+F G+T+P+ISI+SYLERIF+YANCS SC++VAY+YLDRFV++QP L
Subjt:  MADQLD---HHQNQMVPI----PKVITFLSSLLQRVSESNDQSLELQSVAKVSAFHGLTRPTISIQSYLERIFKYANCSPSCFVVAYVYLDRFVQRQPSL

Query:  PIDSFNVHRLLITSVLVSAKFLDDLESS---VFRLGGVSLNSLVLLE
        PI+SFNVHRL+ITSVLVSAKF+DDL  +     ++GG+S   + +LE
Subjt:  PIDSFNVHRLLITSVLVSAKFLDDLESS---VFRLGGVSLNSLVLLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGATCAATTGGATCATCATCAGAATCAAATGGTTCCAATCCCCAAAGTCATCACTTTTCTTTCATCTCTTTTGCAGAGAGTTTCAGAGTCCAATGACCAAAGCCT
TGAGCTTCAAAGCGTGGCCAAAGTTTCAGCCTTTCATGGCTTGACAAGGCCAACCATATCCATTCAAAGCTACTTGGAGAGGATCTTTAAGTATGCAAATTGCAGCCCAA
GTTGCTTTGTTGTGGCTTATGTTTATCTTGATCGCTTCGTTCAGCGCCAGCCTTCTTTGCCCATTGATTCCTTCAATGTTCATAGGCTTCTCATTACCAGTGTTCTTGTC
TCTGCTAAGTTCTTGGATGACTTAGAGTCTTCGGTCTTCAGACTTGGTGGAGTCTCTCTGAATTCTCTGGTTCTGCTTGAGAGCTTTGAAACTCTGAACTCTTGTCTTTG
TGAGAGTCTAGAATTTCTGAACCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGATCAATTGGATCATCATCAGAATCAAATGGTTCCAATCCCCAAAGTCATCACTTTTCTTTCATCTCTTTTGCAGAGAGTTTCAGAGTCCAATGACCAAAGCCT
TGAGCTTCAAAGCGTGGCCAAAGTTTCAGCCTTTCATGGCTTGACAAGGCCAACCATATCCATTCAAAGCTACTTGGAGAGGATCTTTAAGTATGCAAATTGCAGCCCAA
GTTGCTTTGTTGTGGCTTATGTTTATCTTGATCGCTTCGTTCAGCGCCAGCCTTCTTTGCCCATTGATTCCTTCAATGTTCATAGGCTTCTCATTACCAGTGTTCTTGTC
TCTGCTAAGTTCTTGGATGACTTAGAGTCTTCGGTCTTCAGACTTGGTGGAGTCTCTCTGAATTCTCTGGTTCTGCTTGAGAGCTTTGAAACTCTGAACTCTTGTCTTTG
TGAGAGTCTAGAATTTCTGAACCCTTGA
Protein sequenceShow/hide protein sequence
MADQLDHHQNQMVPIPKVITFLSSLLQRVSESNDQSLELQSVAKVSAFHGLTRPTISIQSYLERIFKYANCSPSCFVVAYVYLDRFVQRQPSLPIDSFNVHRLLITSVLV
SAKFLDDLESSVFRLGGVSLNSLVLLESFETLNSCLCESLEFLNP