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Spg002612 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg002612
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionLOW QUALITY PROTEIN: leucine-rich repeat protein 2-like
Genome locationscaffold6:4545133..4548705
RNA-Seq ExpressionSpg002612
SyntenySpg002612
Gene Ontology termsNA
InterPro domainsIPR007513 - Uncharacterised protein family SERF, N-terminal
IPR026939 - ZNF706/At2g23090 superfamily
IPR039438 - At2g23090-like, zinc-binding domain
IPR039713 - At2g23090-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG5621319.1 hypothetical protein H5410_006537 [Solanum commersonii]2.1e-2147.59Show/hide
Query:  MGGGNGQKAKMARERNLEKQKGAKGT--------------FSLYPFAYSSVTSIGSSVFPLISKPARFQQESHDYSGLTRGLGTKKSRKAYPISYI-HNP
        MGGGNGQKAKMARERNLEK KGAKG+                L        T + S V  L+ K A++  +    +G        + R  + + ++  + 
Subjt:  MGGGNGQKAKMARERNLEKQKGAKGT--------------FSLYPFAYSSVTSIGSSVFPLISKPARFQQESHDYSGLTRGLGTKKSRKAYPISYI-HNP

Query:  FPTQL--CKVCMQTFMCTTSEVKCREHAEAKHPKSDVFTCFPHLQ
        +P QL  CKVCMQTFMCTTSEVKC+EHAEAKHPKSD++ CFPHL+
Subjt:  FPTQL--CKVCMQTFMCTTSEVKCREHAEAKHPKSDVFTCFPHLQ

KAG6747636.1 hypothetical protein POTOM_047526 [Populus tomentosa]4.8e-2151.54Show/hide
Query:  MGGGNGQKAKMARERNLEKQKGA-KGTFSLYPFAYSSVTSIGSSVFPLISKPARFQQESHDYSGLTRGLGTKKSRKAYPISYIHNPFPTQLCKVCMQTFM
        MGGGNGQKAKMARE+NLEKQK A KG    +    +   S                      S L  G   + ++KA  I  I        CKVCMQTF+
Subjt:  MGGGNGQKAKMARERNLEKQKGA-KGTFSLYPFAYSSVTSIGSSVFPLISKPARFQQESHDYSGLTRGLGTKKSRKAYPISYIHNPFPTQLCKVCMQTFM

Query:  CTTSEVKCREHAEAKHPKSDVFTCFPHLQK
        CTTSEVKCREHAEAKHPKSDV+ CFPHLQK
Subjt:  CTTSEVKCREHAEAKHPKSDVFTCFPHLQK

PWZ13079.1 Uncharacterized protein Zm00014a_035253 [Zea mays]1.1e-2044.22Show/hide
Query:  MGGGNGQKAKMARERNLEKQKGAKGTFSLYP----------FAYSSVTSIGSSVFPLISKPARFQQESHDYSGLTRGLGTKKSRK---------AYPISY
        MGGGN QK+KMARERN EK KG KG +   P             SS +    SVF    +PA  QQE H++ G +  +   + R+          Y   +
Subjt:  MGGGNGQKAKMARERNLEKQKGAKGTFSLYP----------FAYSSVTSIGSSVFPLISKPARFQQESHDYSGLTRGLGTKKSRK---------AYPISY

Query:  IHNPFPTQLCKVCMQTFMCTTSEVKCREHAEAKHPKSDVFTCFPHLQ
        I   F    CK+CMQTF+CTTSE KC+EHAEA+HPK+D++ CFPHL+
Subjt:  IHNPFPTQLCKVCMQTFMCTTSEVKCREHAEAKHPKSDVFTCFPHLQ

XP_004152272.1 uncharacterized protein At2g23090 [Cucumis sativus]1.3e-2153.49Show/hide
Query:  MGGGNGQKAKMARERNLEKQKGAKGTFSLYPFAYSSVTSIGSSVFPLISKPARFQQESHDYSGLTRGLGTKKSRKAYPISYIHNPFPTQLCKVCMQTFMC
        MGGGNGQKAKMARERNLEKQKGAKG+                            Q +S              ++KA  I           CKVCMQTFMC
Subjt:  MGGGNGQKAKMARERNLEKQKGAKGTFSLYPFAYSSVTSIGSSVFPLISKPARFQQESHDYSGLTRGLGTKKSRKAYPISYIHNPFPTQLCKVCMQTFMC

Query:  TTSEVKCREHAEAKHPKSDVFTCFPHLQK
        TTSEVKCREHAEAKHPKSDVFTCFPHLQK
Subjt:  TTSEVKCREHAEAKHPKSDVFTCFPHLQK

XP_023552184.1 uncharacterized protein At2g23090-like [Cucurbita pepo subsp. pepo]1.1e-2051.94Show/hide
Query:  MGGGNGQKAKMARERNLEKQKGAKGTFSLYPFAYSSVTSIGSSVFPLISKPARFQQESHDYSGLTRGLGTKKSRKAYPISYIHNPFPTQLCKVCMQTFMC
        MGGGNGQKAKMARERNLEKQKGAKG+                            Q +S              ++KA  I           CKVCMQTF+C
Subjt:  MGGGNGQKAKMARERNLEKQKGAKGTFSLYPFAYSSVTSIGSSVFPLISKPARFQQESHDYSGLTRGLGTKKSRKAYPISYIHNPFPTQLCKVCMQTFMC

Query:  TTSEVKCREHAEAKHPKSDVFTCFPHLQK
        TTSEVKCREHAEAKHPKSDVF+CFPHLQK
Subjt:  TTSEVKCREHAEAKHPKSDVFTCFPHLQK

TrEMBL top hitse value%identityAlignment
A0A0A0KV37 Uncharacterized protein6.1e-2253.49Show/hide
Query:  MGGGNGQKAKMARERNLEKQKGAKGTFSLYPFAYSSVTSIGSSVFPLISKPARFQQESHDYSGLTRGLGTKKSRKAYPISYIHNPFPTQLCKVCMQTFMC
        MGGGNGQKAKMARERNLEKQKGAKG+                            Q +S              ++KA  I           CKVCMQTFMC
Subjt:  MGGGNGQKAKMARERNLEKQKGAKGTFSLYPFAYSSVTSIGSSVFPLISKPARFQQESHDYSGLTRGLGTKKSRKAYPISYIHNPFPTQLCKVCMQTFMC

Query:  TTSEVKCREHAEAKHPKSDVFTCFPHLQK
        TTSEVKCREHAEAKHPKSDVFTCFPHLQK
Subjt:  TTSEVKCREHAEAKHPKSDVFTCFPHLQK

A0A1S3BZP7 uncharacterized protein At2g23090-like6.1e-2253.49Show/hide
Query:  MGGGNGQKAKMARERNLEKQKGAKGTFSLYPFAYSSVTSIGSSVFPLISKPARFQQESHDYSGLTRGLGTKKSRKAYPISYIHNPFPTQLCKVCMQTFMC
        MGGGNGQKAKMARERNLEKQKGAKG+                            Q +S              ++KA  I           CKVCMQTFMC
Subjt:  MGGGNGQKAKMARERNLEKQKGAKGTFSLYPFAYSSVTSIGSSVFPLISKPARFQQESHDYSGLTRGLGTKKSRKAYPISYIHNPFPTQLCKVCMQTFMC

Query:  TTSEVKCREHAEAKHPKSDVFTCFPHLQK
        TTSEVKCREHAEAKHPKSDVFTCFPHLQK
Subjt:  TTSEVKCREHAEAKHPKSDVFTCFPHLQK

A0A3L6DX65 zf-met2 domain-containing protein5.2e-2144.22Show/hide
Query:  MGGGNGQKAKMARERNLEKQKGAKGTFSLYP----------FAYSSVTSIGSSVFPLISKPARFQQESHDYSGLTRGLGTKKSRK---------AYPISY
        MGGGN QK+KMARERN EK KG KG +   P             SS +    SVF    +PA  QQE H++ G +  +   + R+          Y   +
Subjt:  MGGGNGQKAKMARERNLEKQKGAKGTFSLYP----------FAYSSVTSIGSSVFPLISKPARFQQESHDYSGLTRGLGTKKSRK---------AYPISY

Query:  IHNPFPTQLCKVCMQTFMCTTSEVKCREHAEAKHPKSDVFTCFPHLQ
        I   F    CK+CMQTF+CTTSE KC+EHAEA+HPK+D++ CFPHL+
Subjt:  IHNPFPTQLCKVCMQTFMCTTSEVKCREHAEAKHPKSDVFTCFPHLQ

A0A6J1EA95 uncharacterized protein At2g23090-like5.2e-2151.94Show/hide
Query:  MGGGNGQKAKMARERNLEKQKGAKGTFSLYPFAYSSVTSIGSSVFPLISKPARFQQESHDYSGLTRGLGTKKSRKAYPISYIHNPFPTQLCKVCMQTFMC
        MGGGNGQKAKMARERNLEKQKGAKG+                            Q +S              ++KA  I           CKVCMQTF+C
Subjt:  MGGGNGQKAKMARERNLEKQKGAKGTFSLYPFAYSSVTSIGSSVFPLISKPARFQQESHDYSGLTRGLGTKKSRKAYPISYIHNPFPTQLCKVCMQTFMC

Query:  TTSEVKCREHAEAKHPKSDVFTCFPHLQK
        TTSEVKCREHAEAKHPKSDVF+CFPHLQK
Subjt:  TTSEVKCREHAEAKHPKSDVFTCFPHLQK

A0A6J1J8V9 uncharacterized protein At2g23090-like5.2e-2151.94Show/hide
Query:  MGGGNGQKAKMARERNLEKQKGAKGTFSLYPFAYSSVTSIGSSVFPLISKPARFQQESHDYSGLTRGLGTKKSRKAYPISYIHNPFPTQLCKVCMQTFMC
        MGGGNGQKAKMARERNLEKQKGAKG+                            Q +S              ++KA  I           CKVCMQTF+C
Subjt:  MGGGNGQKAKMARERNLEKQKGAKGTFSLYPFAYSSVTSIGSSVFPLISKPARFQQESHDYSGLTRGLGTKKSRKAYPISYIHNPFPTQLCKVCMQTFMC

Query:  TTSEVKCREHAEAKHPKSDVFTCFPHLQK
        TTSEVKCREHAEAKHPKSDVF+CFPHLQK
Subjt:  TTSEVKCREHAEAKHPKSDVFTCFPHLQK

SwissProt top hitse value%identityAlignment
O64818 Uncharacterized protein At2g230905.7e-1741.86Show/hide
Query:  MGGGNGQKAKMARERNLEKQKGAKGTFSLYPFAYSSVTSIGSSVFPLISKPARFQQESHDYSGLTRGLGTKKSRKAYPISYIHNPFPTQLCKVCMQTFMC
        MGGGN QK+ MAR +NLEK K A                                          +G   + ++KA  I           CKVCMQTF+C
Subjt:  MGGGNGQKAKMARERNLEKQKGAKGTFSLYPFAYSSVTSIGSSVFPLISKPARFQQESHDYSGLTRGLGTKKSRKAYPISYIHNPFPTQLCKVCMQTFMC

Query:  TTSEVKCREHAEAKHPKSDVFTCFPHLQK
        TTSEVKCREHAEAKHPK+DV  CFPHL+K
Subjt:  TTSEVKCREHAEAKHPKSDVFTCFPHLQK

Arabidopsis top hitse value%identityAlignment
AT2G23090.1 Uncharacterised protein family SERF4.0e-1841.86Show/hide
Query:  MGGGNGQKAKMARERNLEKQKGAKGTFSLYPFAYSSVTSIGSSVFPLISKPARFQQESHDYSGLTRGLGTKKSRKAYPISYIHNPFPTQLCKVCMQTFMC
        MGGGN QK+ MAR +NLEK K A                                          +G   + ++KA  I           CKVCMQTF+C
Subjt:  MGGGNGQKAKMARERNLEKQKGAKGTFSLYPFAYSSVTSIGSSVFPLISKPARFQQESHDYSGLTRGLGTKKSRKAYPISYIHNPFPTQLCKVCMQTFMC

Query:  TTSEVKCREHAEAKHPKSDVFTCFPHLQK
        TTSEVKCREHAEAKHPK+DV  CFPHL+K
Subjt:  TTSEVKCREHAEAKHPKSDVFTCFPHLQK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGAGGCAACGGGCAGAAGGCCAAGATGGCTCGCGAGAGAAACCTGGAGAAACAAAAAGGCGCCAAGGGTACTTTCTCTTTATACCCTTTTGCGTACTCTTCAGT
AACTTCAATTGGGTCATCGGTCTTCCCTTTGATTTCGAAGCCAGCTCGATTCCAACAAGAAAGCCATGACTATTCAGGGTTAACTCGTGGCCTAGGCACAAAGAAATCTA
GGAAAGCTTACCCTATATCTTATATTCATAATCCATTTCCCACTCAACTGTGCAAGGTGTGCATGCAGACATTCATGTGTACAACCTCAGAGGTGAAATGTAGGGAGCAT
GCTGAAGCAAAACACCCCAAATCTGATGTCTTCACCTGTTTCCCCCATCTTCAAAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGGAGGCAACGGGCAGAAGGCCAAGATGGCTCGCGAGAGAAACCTGGAGAAACAAAAAGGCGCCAAGGGTACTTTCTCTTTATACCCTTTTGCGTACTCTTCAGT
AACTTCAATTGGGTCATCGGTCTTCCCTTTGATTTCGAAGCCAGCTCGATTCCAACAAGAAAGCCATGACTATTCAGGGTTAACTCGTGGCCTAGGCACAAAGAAATCTA
GGAAAGCTTACCCTATATCTTATATTCATAATCCATTTCCCACTCAACTGTGCAAGGTGTGCATGCAGACATTCATGTGTACAACCTCAGAGGTGAAATGTAGGGAGCAT
GCTGAAGCAAAACACCCCAAATCTGATGTCTTCACCTGTTTCCCCCATCTTCAAAAGTGA
Protein sequenceShow/hide protein sequence
MGGGNGQKAKMARERNLEKQKGAKGTFSLYPFAYSSVTSIGSSVFPLISKPARFQQESHDYSGLTRGLGTKKSRKAYPISYIHNPFPTQLCKVCMQTFMCTTSEVKCREH
AEAKHPKSDVFTCFPHLQK