; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg002651 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg002651
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionZinc finger CCHC domain-containing protein 9
Genome locationscaffold6:1534238..1537256
RNA-Seq ExpressionSpg002651
SyntenySpg002651
Gene Ontology termsGO:0030042 - actin filament depolymerization (biological process)
GO:0015629 - actin cytoskeleton (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003779 - actin binding (molecular function)
GO:0004386 - helicase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013235.1 hypothetical protein SDJN02_25993 [Cucurbita argyrosperma subsp. argyrosperma]1.2e-10580.08Show/hide
Query:  MVSQRQKLARKKYREEHPELFPKAEPTPPKDPDKKKKKKSKFKRKKAESNSTKDPNKPHKKGFKKHPLRVPGMKPGESCFICKAKEHIAKFCPEKAQWEK
        MVS+RQKLARKKYREEHPELFPKAEPTPPKDP+KKKKKK   KRKK ES+S  DPNKPH+KGFKKHPLRVPGMKPGESCFICKAK+HIAKFCPEKAQWEK
Subjt:  MVSQRQKLARKKYREEHPELFPKAEPTPPKDPDKKKKKKSKFKRKKAESNSTKDPNKPHKKGFKKHPLRVPGMKPGESCFICKAKEHIAKFCPEKAQWEK

Query:  NKVFILCFAFHVSDASMFTEIMETLLIEDWGTKFASCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPNKGTQGYAGAGVSGNRSSGYVE
        NK +                         WGT+FA+CFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCP KGTQ +AG G SGNRSSGYVE
Subjt:  NKVFILCFAFHVSDASMFTEIMETLLIEDWGTKFASCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPNKGTQGYAGAGVSGNRSSGYVE

Query:  MSRRPETRLVSGDDLEDDFMIDEDHLQIKDAKEGKKKGPKVVKFMD
        MSRRPETRLVSGDDLEDDFM++ED+LQIKDAK GKKKGPKVVKFMD
Subjt:  MSRRPETRLVSGDDLEDDFMIDEDHLQIKDAKEGKKKGPKVVKFMD

XP_022945772.1 uncharacterized protein LOC111449917 [Cucurbita moschata]1.6e-10575.84Show/hide
Query:  MVSQRQKLARKKYREEHPELFPKAEPTPPKDPDK---KKKKKSKFKRKKAESNSTKDPNKPHKKGFKKHPLRVPGMKPGESCFICKAKEHIAKFCPEKAQ
        MVS+RQKLARKKYREEHPELFPKAEPTPPKDP+K   KKKKKS+FKRKK ES+S  DP KPHKKGFKKHPLRVPGMKPGESCFICKAK+HIAKFCPEKAQ
Subjt:  MVSQRQKLARKKYREEHPELFPKAEPTPPKDPDK---KKKKKSKFKRKKAESNSTKDPNKPHKKGFKKHPLRVPGMKPGESCFICKAKEHIAKFCPEKAQ

Query:  WEKNKVFILCFAFHVS------------DASMFTEIMET--------LLIEDWGTKFASCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDC
        WEKNK+ +LC     S            D  +     ET          ++  GTKFA+CFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDC
Subjt:  WEKNKVFILCFAFHVS------------DASMFTEIMET--------LLIEDWGTKFASCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDC

Query:  PNKGTQGYAGAGVSGNRSSGYVEMSRRPETRLVSGDDLEDDFMIDEDHLQIKDAKEGKKKGPKVVKFMD
        P KGTQ +AG G SGNRSSGYVEMSRRPET+LVSGDDLEDDFM++ED+LQIKDAK GKKKGPKVVKFMD
Subjt:  PNKGTQGYAGAGVSGNRSSGYVEMSRRPETRLVSGDDLEDDFMIDEDHLQIKDAKEGKKKGPKVVKFMD

XP_022967999.1 uncharacterized protein LOC111467373 [Cucurbita maxima]4.1e-10676.69Show/hide
Query:  MVSQRQKLARKKYREEHPELFPKAEPTPPKDPDKKKKKKSKFKRKKAESNSTKDPNKPHKKGFKKHPLRVPGMKPGESCFICKAKEHIAKFCPEKAQWEK
        MVS+RQKLARKKYREEHPELFPKAEPTPPKDP+ KKKKKS+FKRKK ES+S  DPNKPHKKGFKKHPLRVPGMKPGESCFICKAK+HIAKFCPEKAQWEK
Subjt:  MVSQRQKLARKKYREEHPELFPKAEPTPPKDPDKKKKKKSKFKRKKAESNSTKDPNKPHKKGFKKHPLRVPGMKPGESCFICKAKEHIAKFCPEKAQWEK

Query:  NKVFILCFAFHVS------------DASMFTEIMET--------LLIEDWGTKFASCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPNK
        NK+ +LC     S            D  +     ET          ++  GTK+A+CFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCP K
Subjt:  NKVFILCFAFHVS------------DASMFTEIMET--------LLIEDWGTKFASCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPNK

Query:  GTQGYAGAGVSGNRSSGYVEMSRRPETRLVSGDDLEDDFMIDEDHLQIKDAKEGKKKGPKVVKFMD
        GTQ YAG GVS NRSSGYVEMSRRPETRLVSGDDLEDDFM++ED+LQIKDAK G KKGPKVVKFMD
Subjt:  GTQGYAGAGVSGNRSSGYVEMSRRPETRLVSGDDLEDDFMIDEDHLQIKDAKEGKKKGPKVVKFMD

XP_023542027.1 uncharacterized protein LOC111802000 [Cucurbita pepo subsp. pepo]7.0e-10676.49Show/hide
Query:  MVSQRQKLARKKYREEHPELFPKAEPTPPKDPD--KKKKKKSKFKRKKAESNSTKDPNKPHKKGFKKHPLRVPGMKPGESCFICKAKEHIAKFCPEKAQW
        MVS+RQKLARKKYREEHPELFPKAEPTPPKDP+  KKKKKKS+FKRKK ES+S  DPNKPHKKGFKKHPLRVPGMKPGESCFICKAK+HIAKFCPEKAQW
Subjt:  MVSQRQKLARKKYREEHPELFPKAEPTPPKDPD--KKKKKKSKFKRKKAESNSTKDPNKPHKKGFKKHPLRVPGMKPGESCFICKAKEHIAKFCPEKAQW

Query:  EKNKVFILCFAFHVS------------DASMFTEIMET--------LLIEDWGTKFASCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCP
        EKNK+ +LC     S            D  +     ET          ++  GTKFA+CFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCP
Subjt:  EKNKVFILCFAFHVS------------DASMFTEIMET--------LLIEDWGTKFASCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCP

Query:  NKGTQGYAGAGVSGNRSSGYVEMSRRPETRLVSGDDLEDDFMIDEDHLQIKDAKEGKKKGPKVVKFMD
         KGTQ YAG GVS NRSSGYVEMSRRPET+LVSGDDLEDDFM++ED+LQIKDAK GKKK PKVVKFMD
Subjt:  NKGTQGYAGAGVSGNRSSGYVEMSRRPETRLVSGDDLEDDFMIDEDHLQIKDAKEGKKKGPKVVKFMD

XP_023552826.1 uncharacterized protein LOC111810346 [Cucurbita pepo subsp. pepo]6.4e-10777.07Show/hide
Query:  MVSQRQKLARKKYREEHPELFPKAEPTPPKDPDKKKKKKSKFKRKKAESNSTKDPNKPHKKGFKKHPLRVPGMKPGESCFICKAKEHIAKFCPEKAQWEK
        MVSQRQ+LARKKYREEHPELFP+AEPTPPKDPDKKKKKKSKFKRKKAESNST+DPNKPHKKGFKKHPLRVPGMKPGESCFICKAK+HIAK CPEKAQWEK
Subjt:  MVSQRQKLARKKYREEHPELFPKAEPTPPKDPDKKKKKKSKFKRKKAESNSTKDPNKPHKKGFKKHPLRVPGMKPGESCFICKAKEHIAKFCPEKAQWEK

Query:  NKVFILCFAFHVS------------DASMFTEIMET--------LLIEDWGTKFASCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPNK
        NK+ +LC     S            D  +     ET          ++D GTKFASCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPNK
Subjt:  NKVFILCFAFHVS------------DASMFTEIMET--------LLIEDWGTKFASCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPNK

Query:  GTQGYAGAGVSGNRSSGYVEMSRRPETRLVSGDDLEDDFMIDEDHLQIKDAKEGKKKGPKVVKFMD
         TQ ++G    GNRSSGYVEM RRPETR VSGDDLEDDF +DEDHLQ+KDAK  KKKGPKVVKFMD
Subjt:  GTQGYAGAGVSGNRSSGYVEMSRRPETRLVSGDDLEDDFMIDEDHLQIKDAKEGKKKGPKVVKFMD

TrEMBL top hitse value%identityAlignment
A0A0A0L9S9 Uncharacterized protein7.1e-10475.56Show/hide
Query:  MVSQRQKLARKKYREEHPELFPKAEPTPPKDPDKKKKKKSKFKRKKAESNSTKDPNKPHKKGFKKHPLRVPGMKPGESCFICKAKEHIAKFCPEKAQWEK
        MV+QRQ+LARKKY+EEHPELFPKAEPTPPKDPD KKKKKSKFKRKK ESNS +DP KPHKKGFKKHPLRVPGMKPGESCFICKA +HIAK CPEKAQWEK
Subjt:  MVSQRQKLARKKYREEHPELFPKAEPTPPKDPDKKKKKKSKFKRKKAESNSTKDPNKPHKKGFKKHPLRVPGMKPGESCFICKAKEHIAKFCPEKAQWEK

Query:  NKVFILCFAFHVS------------DASMFTEIMET--------LLIEDWGTKFASCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPNK
        NK+ +LC     S            D  +     ET          ++D GTKFASCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCP K
Subjt:  NKVFILCFAFHVS------------DASMFTEIMET--------LLIEDWGTKFASCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPNK

Query:  GTQGYAGAGVSGNRSSGYVEMSRRPETRLVSGDDLEDDFMIDEDHLQIKDAKEGKKKGPKVVKFMD
        GTQ +  AGV G RSSGYVEM RRPET+L+SGDDLEDDFMIDE  LQIKDAK GKKKGPKVVKFMD
Subjt:  GTQGYAGAGVSGNRSSGYVEMSRRPETRLVSGDDLEDDFMIDEDHLQIKDAKEGKKKGPKVVKFMD

A0A5D3DHA5 Zinc finger CCHC domain-containing protein 93.2e-10472.18Show/hide
Query:  MVSQRQKLARKKYREEHPELFPKAEPTPPKDPDKKKKKKSKFKRKKAESNSTKDPNKPHKKGFKKHPLRVPGMKPGESCFICKAKEHIAKFCPEKAQWEK
        MVSQRQ+LARKKYRE HPELFPKAEPTPPKDPD  KKKKSKFKRKK ESNS +DPNKPHKKGFKKHPLRVPGMKPGESCFICKAK+HIAK CPEKAQWEK
Subjt:  MVSQRQKLARKKYREEHPELFPKAEPTPPKDPDKKKKKKSKFKRKKAESNSTKDPNKPHKKGFKKHPLRVPGMKPGESCFICKAKEHIAKFCPEKAQWEK

Query:  NKVFILCFAFHVSDASMFTEI---------------------METLL-----------------IEDWGTKFASCFICNESGHLSKNCPKNTHGIYPKGG
        NKV +    F + +     +I                     M+  L                 ++D GTKFASCFICNESGHLSKNCPKNTHGIYPKGG
Subjt:  NKVFILCFAFHVSDASMFTEI---------------------METLL-----------------IEDWGTKFASCFICNESGHLSKNCPKNTHGIYPKGG

Query:  CCKTCGEVTHLAKDCPNKGTQGYAGAGVSGNRSSGYVEMSRRPETRLVSGDDLEDDFMIDEDHLQIKDAKEGKKKGPKVVKFMD
        CCKTCGEVTHLAKDCP KGTQ +  AGVSG RSSGYVEM RRPET+LVSGDDLEDDFMIDED LQIKDAK GKKKGPKVVKFMD
Subjt:  CCKTCGEVTHLAKDCPNKGTQGYAGAGVSGNRSSGYVEMSRRPETRLVSGDDLEDDFMIDEDHLQIKDAKEGKKKGPKVVKFMD

A0A6J1CI48 uncharacterized protein LOC1110116019.9e-10676.32Show/hide
Query:  MVSQRQKLARKKYREEHPELFPKAEPTPPKDPDKKKKKKSKFKRKKAESNSTKDPNKPHKKGFKKHPLRVPGMKPGESCFICKAKEHIAKFCPEKAQWEK
        MVSQRQKLARKKY+E HPELFPKAEPTPPKDP+KKKKKKSKFKR KAES   KDPNKP KKGFKKHPLRVPGMKPGESCFICKAK+HIAK CPEKAQWEK
Subjt:  MVSQRQKLARKKYREEHPELFPKAEPTPPKDPDKKKKKKSKFKRKKAESNSTKDPNKPHKKGFKKHPLRVPGMKPGESCFICKAKEHIAKFCPEKAQWEK

Query:  NKVFILC-----FAFHVSDASMFTEIMETLL---------------IEDWGTKFASCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPNK
        NK+ +LC        +  D S  TE  +                  ++D GTKFA+CFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPNK
Subjt:  NKVFILC-----FAFHVSDASMFTEIMETLL---------------IEDWGTKFASCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPNK

Query:  GTQGYAGAGVSGNRSSGYVEMSRRPETRLVSGDDLEDDFMIDEDHLQIKDAKEGKKKGPKVVKFMD
        GT+  A AG+SGNRSSGY+EM RRP TRLVSGDDLEDDFMIDEDHLQI DAK GKKKGPKVVKF+D
Subjt:  GTQGYAGAGVSGNRSSGYVEMSRRPETRLVSGDDLEDDFMIDEDHLQIKDAKEGKKKGPKVVKFMD

A0A6J1G1V2 uncharacterized protein LOC1114499177.6e-10675.84Show/hide
Query:  MVSQRQKLARKKYREEHPELFPKAEPTPPKDPDK---KKKKKSKFKRKKAESNSTKDPNKPHKKGFKKHPLRVPGMKPGESCFICKAKEHIAKFCPEKAQ
        MVS+RQKLARKKYREEHPELFPKAEPTPPKDP+K   KKKKKS+FKRKK ES+S  DP KPHKKGFKKHPLRVPGMKPGESCFICKAK+HIAKFCPEKAQ
Subjt:  MVSQRQKLARKKYREEHPELFPKAEPTPPKDPDK---KKKKKSKFKRKKAESNSTKDPNKPHKKGFKKHPLRVPGMKPGESCFICKAKEHIAKFCPEKAQ

Query:  WEKNKVFILCFAFHVS------------DASMFTEIMET--------LLIEDWGTKFASCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDC
        WEKNK+ +LC     S            D  +     ET          ++  GTKFA+CFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDC
Subjt:  WEKNKVFILCFAFHVS------------DASMFTEIMET--------LLIEDWGTKFASCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDC

Query:  PNKGTQGYAGAGVSGNRSSGYVEMSRRPETRLVSGDDLEDDFMIDEDHLQIKDAKEGKKKGPKVVKFMD
        P KGTQ +AG G SGNRSSGYVEMSRRPET+LVSGDDLEDDFM++ED+LQIKDAK GKKKGPKVVKFMD
Subjt:  PNKGTQGYAGAGVSGNRSSGYVEMSRRPETRLVSGDDLEDDFMIDEDHLQIKDAKEGKKKGPKVVKFMD

A0A6J1HYC2 uncharacterized protein LOC1114673732.0e-10676.69Show/hide
Query:  MVSQRQKLARKKYREEHPELFPKAEPTPPKDPDKKKKKKSKFKRKKAESNSTKDPNKPHKKGFKKHPLRVPGMKPGESCFICKAKEHIAKFCPEKAQWEK
        MVS+RQKLARKKYREEHPELFPKAEPTPPKDP+ KKKKKS+FKRKK ES+S  DPNKPHKKGFKKHPLRVPGMKPGESCFICKAK+HIAKFCPEKAQWEK
Subjt:  MVSQRQKLARKKYREEHPELFPKAEPTPPKDPDKKKKKKSKFKRKKAESNSTKDPNKPHKKGFKKHPLRVPGMKPGESCFICKAKEHIAKFCPEKAQWEK

Query:  NKVFILCFAFHVS------------DASMFTEIMET--------LLIEDWGTKFASCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPNK
        NK+ +LC     S            D  +     ET          ++  GTK+A+CFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCP K
Subjt:  NKVFILCFAFHVS------------DASMFTEIMET--------LLIEDWGTKFASCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPNK

Query:  GTQGYAGAGVSGNRSSGYVEMSRRPETRLVSGDDLEDDFMIDEDHLQIKDAKEGKKKGPKVVKFMD
        GTQ YAG GVS NRSSGYVEMSRRPETRLVSGDDLEDDFM++ED+LQIKDAK G KKGPKVVKFMD
Subjt:  GTQGYAGAGVSGNRSSGYVEMSRRPETRLVSGDDLEDDFMIDEDHLQIKDAKEGKKKGPKVVKFMD

SwissProt top hitse value%identityAlignment
Q04832 DNA-binding protein HEXBP7.8e-0726.12Show/hide
Query:  GMKPGESCFICKAKEHIAKFCPEKAQWEKNKVFILCFAFHVSDASMFTEIMETLLIEDWGTKFASCFICNESGHLSKNCPKN----------------TH
        G +   +CF C  + H+++ CP +A   ++        F   +A   +        +    K   C+ C + GHLS++CP +                  
Subjt:  GMKPGESCFICKAKEHIAKFCPEKAQWEKNKVFILCFAFHVSDASMFTEIMETLLIEDWGTKFASCFICNESGHLSKNCPKN----------------TH

Query:  GIYPKGGCCKTCGEVTHLAKDCPNKGTQGYAGAG
        G Y     C  CG+  H+++DCPN G  GY+GAG
Subjt:  GIYPKGGCCKTCGEVTHLAKDCPNKGTQGYAGAG

Q8N567 Zinc finger CCHC domain-containing protein 98.0e-1262.22Show/hide
Query:  FASCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCP
        FA CF+C E GHLS++CP N  G+Y  GG CK CG V HL KDCP
Subjt:  FASCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCP

Q8R1J3 Zinc finger CCHC domain-containing protein 91.4e-1161.36Show/hide
Query:  FASCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDC
        FA CF+C E GHLS++CP NT G+Y  GG CK CG V H  KDC
Subjt:  FASCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDC

Q8T8R1 CCHC-type zinc finger protein CG38005.0e-0627.83Show/hide
Query:  ESCFICKAKEHIAKFCPEKAQ--WEKNKVFILCFAFHVSDASMFTEIMET--------LLIEDWGTKFASCFICNESGHLSKNCPKNTHGIYPKGGCCKT
        E C+ C    H A+ CPE+A+  +  N +  +      +D        +T          + + G    SC+ CN +GH+SKNCP+ +         C  
Subjt:  ESCFICKAKEHIAKFCPEKAQ--WEKNKVFILCFAFHVSDASMFTEIMET--------LLIEDWGTKFASCFICNESGHLSKNCPKNTHGIYPKGGCCKT

Query:  CGEVTHLAKDCPNKG
        CG+  HL ++C  KG
Subjt:  CGEVTHLAKDCPNKG

Q9HFF2 Uncharacterized protein C683.02c5.0e-1434.71Show/hide
Query:  RKKYREEHPELFPKAEPTPPKDPDKKKKKKSKFKRKKAESNSTK--DPNKPHKKGFKKHPLRVPGMKPGESCFICKAKEHIAKFCPEKAQWEKNKVFILC
        RK++ E  P  +       PK+     ++ S     KA   S+K  D  +  K+   +   R+      + CF C+ + HI + CPE     K+ V I C
Subjt:  RKKYREEHPELFPKAEPTPPKDPDKKKKKKSKFKRKKAESNSTK--DPNKPHKKGFKKHPLRVPGMKPGESCFICKAKEHIAKFCPEKAQWEKNKVFILC

Query:  FAFHVSDASMFTEIMETLLIEDWGTKFASCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDC
        F     + S+          +    KFA CFIC+E+GHLS  C +N  G+YPKGGCCK C  V HLAKDC
Subjt:  FAFHVSDASMFTEIMETLLIEDWGTKFASCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDC

Arabidopsis top hitse value%identityAlignment
AT2G17870.1 cold shock domain protein 33.4e-0534.25Show/hide
Query:  CFICNESGHLSKNCPKNTHGIYPKGG-CCKTCGEVTHLAKDCPNKGTQGYAGAGVSGNRSSGYVEMSRRPETR
        C++C   GH +++C +N  G    GG  C TCG V H+AK C +K   G  G G +     G   ++R  + R
Subjt:  CFICNESGHLSKNCPKNTHGIYPKGG-CCKTCGEVTHLAKDCPNKGTQGYAGAGVSGNRSSGYVEMSRRPETR

AT3G43590.1 zinc knuckle (CCHC-type) family protein4.4e-0538.57Show/hide
Query:  FASCFICNESGHLSKNCPKNT-------------HGI--YPKGGCCKTCGEVTHLAKDCPNKGTQGYAGA
        + SC+ C E GH S NCP  T             HG     KG  C  C +  H AKDCP+K   G  GA
Subjt:  FASCFICNESGHLSKNCPKNT-------------HGI--YPKGGCCKTCGEVTHLAKDCPNKGTQGYAGA

AT4G36020.1 cold shock domain protein 12.8e-0431.25Show/hide
Query:  CFICNESGHLSKNCPKNTHGIYPKGGC-------CKTCGEVTHLAKDCPNKGTQGYAGAGVSGN
        C+ C + GH++++C + + G   + G        C TCG+V H A+DC  K   G   +G  G+
Subjt:  CFICNESGHLSKNCPKNTHGIYPKGGC-------CKTCGEVTHLAKDCPNKGTQGYAGAGVSGN

AT5G52380.1 VASCULAR-RELATED NAC-DOMAIN 64.8e-6046.93Show/hide
Query:  MVSQRQKLARKKYREEHPELFPKAEPTPPKDPDKKKKKKSKFKRKKAESNSTKDPNKPHKKGFK-KHPLRVPGMKPGESCFICKAKEHIAKFCPEKAQWE
        MV+QR++LA+K+Y+E +PELFPKAEPTPPKDP+KKKKKKS FK+KK  S++    ++P + G   +HPLRVPGMKPGE CFIC +K HIAK CPEK++WE
Subjt:  MVSQRQKLARKKYREEHPELFPKAEPTPPKDPDKKKKKKSKFKRKKAESNSTKDPNKPHKKGFK-KHPLRVPGMKPGESCFICKAKEHIAKFCPEKAQWE

Query:  KNKVFILC---------------------FAFHVSDASMFTEIMETLLIEDWGTKFASCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCP
        +NK+ + C                       ++  D            +ED GTKFASCFIC   GH+SKNCP+N HGIYP GGCCK CG V HL KDCP
Subjt:  KNKVFILC---------------------FAFHVSDASMFTEIMETLLIEDWGTKFASCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCP

Query:  NKGTQGYAGAGVSGNRSSGYVEMSRRPETRLVSGDDLEDDFM----------IDEDHLQIKDAKEGKKKGPKVVKFM
        +K  Q  A       + +   + + R +    SGDDLEDDF             +D  Q     + KK+GPK+V F+
Subjt:  NKGTQGYAGAGVSGNRSSGYVEMSRRPETRLVSGDDLEDDFM----------IDEDHLQIKDAKEGKKKGPKVVKFM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAGCCAAAGGCAAAAACTTGCCCGGAAAAAGTACAGAGAGGAACACCCAGAACTGTTCCCGAAAGCAGAGCCAACGCCACCGAAAGACCCCGACAAGAAGAAGAA
GAAGAAGAGTAAATTCAAGCGCAAAAAGGCAGAATCGAATTCAACCAAAGACCCAAATAAACCCCACAAAAAGGGTTTCAAGAAACACCCTCTTCGAGTTCCTGGGATGA
AGCCTGGAGAAAGCTGCTTCATCTGCAAAGCTAAAGAACACATTGCTAAGTTTTGCCCTGAGAAGGCTCAATGGGAGAAGAACAAGGTTTTTATTCTTTGTTTTGCTTTT
CATGTTTCTGATGCTTCAATGTTCACTGAGATTATGGAAACTTTGCTGATTGAAGATTGGGGAACTAAATTCGCCAGTTGTTTTATTTGTAACGAAAGCGGACACTTAAG
CAAGAACTGCCCGAAGAACACTCATGGGATCTACCCTAAGGGTGGTTGTTGTAAAACTTGTGGGGAAGTGACACATTTAGCTAAGGATTGTCCAAACAAAGGCACCCAAG
GTTATGCTGGGGCTGGTGTATCTGGTAACAGATCATCGGGATATGTAGAAATGTCGAGACGACCAGAAACGAGACTCGTCAGCGGTGACGATCTCGAGGATGACTTCATG
ATCGACGAAGATCATTTGCAAATCAAAGATGCAAAAGAGGGAAAGAAAAAGGGCCCCAAAGTTGTGAAGTTCATGGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGAGCCAAAGGCAAAAACTTGCCCGGAAAAAGTACAGAGAGGAACACCCAGAACTGTTCCCGAAAGCAGAGCCAACGCCACCGAAAGACCCCGACAAGAAGAAGAA
GAAGAAGAGTAAATTCAAGCGCAAAAAGGCAGAATCGAATTCAACCAAAGACCCAAATAAACCCCACAAAAAGGGTTTCAAGAAACACCCTCTTCGAGTTCCTGGGATGA
AGCCTGGAGAAAGCTGCTTCATCTGCAAAGCTAAAGAACACATTGCTAAGTTTTGCCCTGAGAAGGCTCAATGGGAGAAGAACAAGGTTTTTATTCTTTGTTTTGCTTTT
CATGTTTCTGATGCTTCAATGTTCACTGAGATTATGGAAACTTTGCTGATTGAAGATTGGGGAACTAAATTCGCCAGTTGTTTTATTTGTAACGAAAGCGGACACTTAAG
CAAGAACTGCCCGAAGAACACTCATGGGATCTACCCTAAGGGTGGTTGTTGTAAAACTTGTGGGGAAGTGACACATTTAGCTAAGGATTGTCCAAACAAAGGCACCCAAG
GTTATGCTGGGGCTGGTGTATCTGGTAACAGATCATCGGGATATGTAGAAATGTCGAGACGACCAGAAACGAGACTCGTCAGCGGTGACGATCTCGAGGATGACTTCATG
ATCGACGAAGATCATTTGCAAATCAAAGATGCAAAAGAGGGAAAGAAAAAGGGCCCCAAAGTTGTGAAGTTCATGGATTGA
Protein sequenceShow/hide protein sequence
MVSQRQKLARKKYREEHPELFPKAEPTPPKDPDKKKKKKSKFKRKKAESNSTKDPNKPHKKGFKKHPLRVPGMKPGESCFICKAKEHIAKFCPEKAQWEKNKVFILCFAF
HVSDASMFTEIMETLLIEDWGTKFASCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPNKGTQGYAGAGVSGNRSSGYVEMSRRPETRLVSGDDLEDDFM
IDEDHLQIKDAKEGKKKGPKVVKFMD