CuGenDBv2

Gene ID	Spg002677
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	endoplasmic reticulum-Golgi intermediate compartment protein 3-like
Genome location	scaffold6:3313993..3316515
RNA-Seq Expression	Spg002677
Synteny	Spg002677
Gene Ontology terms	GO:0005783 - endoplasmic reticulum (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0030134 - COPII-coated ER to Golgi transport vesicle (cellular component)
InterPro domains	IPR039542 - Endoplasmic reticulum vesicle transporter, N-terminal

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7014885.1 Endoplasmic reticulum-Golgi intermediate compartment protein 3 [Cucurbita argyrosperma subsp. argyrosperma]

1.2e-47

87.5

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Query:  MDAIFGKLRNLDAYPKINEDFYKRTFSGGIITLASSFIMLFLFFSELRLYLHATTETKLIVDTSRGGKLHINFDMSFPAIPCSILSLDAIDISGEQHLDI
        MDAIF KLRNLDAYPKINEDFY+RTFSGG+IT+ASSFIMLFLFFSELRLYLHA TETKL+VDTSRGG LHINFD+SFP IPCSIL LDAIDISGEQHLDI
Subjt:  MDAIFGKLRNLDAYPKINEDFYKRTFSGGIITLASSFIMLFLFFSELRLYLHATTETKLIVDTSRGGKLHINFDMSFPAIPCSILSLDAIDISGEQHLDI

Query:  VRAASISTLSLD
        V AA+I+TL LD
Subjt:  VRAASISTLSLD

XP_022943132.1 endoplasmic reticulum-Golgi intermediate compartment protein 3-like isoform X1 [Cucurbita moschata]

3.2e-45

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Query:  MDAIFGKLRNLDAYPKINEDFYKRTFSGGIITLASSFIMLFLFFSELRLYLHATTETKLIVDTSRGGKLHINFDMSFPAIPCSILSLDAIDISGEQHLDI
        MDAIF +LRNLDAYPKINEDFY+RTFSGGIIT+ASSFIMLFLFFSELRLYLHA TET+LIVDTSRGGKLHINFDMSFPAIPCSILS+DAID+SGEQHLDI
Subjt:  MDAIFGKLRNLDAYPKINEDFYKRTFSGGIITLASSFIMLFLFFSELRLYLHATTETKLIVDTSRGGKLHINFDMSFPAIPCSILSLDAIDISGEQHLDI

XP_022943133.1 endoplasmic reticulum-Golgi intermediate compartment protein 3-like isoform X2 [Cucurbita moschata]

1.4e-45

91.09

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Query:  MDAIFGKLRNLDAYPKINEDFYKRTFSGGIITLASSFIMLFLFFSELRLYLHATTETKLIVDTSRGGKLHINFDMSFPAIPCSILSLDAIDISGEQHLDI
        MDAIF +LRNLDAYPKINEDFY+RTFSGGIIT+ASSFIMLFLFFSELRLYLHA TET+LIVDTSRGGKLHINFDMSFPAIPCSILS+DAID+SGEQHLDI
Subjt:  MDAIFGKLRNLDAYPKINEDFYKRTFSGGIITLASSFIMLFLFFSELRLYLHATTETKLIVDTSRGGKLHINFDMSFPAIPCSILSLDAIDISGEQHLDI

Query:  V
        +
Subjt:  V

XP_023514427.1 endoplasmic reticulum-Golgi intermediate compartment protein 3-like isoform X2 [Cucurbita pepo subsp. pepo]

1.4e-45

91.09

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Query:  MDAIFGKLRNLDAYPKINEDFYKRTFSGGIITLASSFIMLFLFFSELRLYLHATTETKLIVDTSRGGKLHINFDMSFPAIPCSILSLDAIDISGEQHLDI
        MDAIF +LRNLDAYPKINEDFY+RTFSGGIIT+ASSFIMLFLFFSELRLYLHA TET+LIVDTSRGGKLHINFDMSFPAIPCSILS+DAID+SGEQHLDI
Subjt:  MDAIFGKLRNLDAYPKINEDFYKRTFSGGIITLASSFIMLFLFFSELRLYLHATTETKLIVDTSRGGKLHINFDMSFPAIPCSILSLDAIDISGEQHLDI

Query:  V
        +
Subjt:  V

XP_038905933.1 endoplasmic reticulum-Golgi intermediate compartment protein 3-like [Benincasa hispida]

3.8e-46

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Query:  MDAIFGKLRNLDAYPKINEDFYKRTFSGGIITLASSFIMLFLFFSELRLYLHATTETKLIVDTSRGGKLHINFDMSFPAIPCSILSLDAIDISGEQHLDI
        MDA+F KLRNLDAYPKINEDFY+RTFSGG+ITLASSFIMLFLFFSELR+YLHATTETKL+VDTSRGGKLHINFD+SFPAIPCSILSLDAIDISGEQHLDI
Subjt:  MDAIFGKLRNLDAYPKINEDFYKRTFSGGIITLASSFIMLFLFFSELRLYLHATTETKLIVDTSRGGKLHINFDMSFPAIPCSILSLDAIDISGEQHLDI

TrEMBL top hits

e value

%identity

Alignment

A0A6J1FS63 endoplasmic reticulum-Golgi intermediate compartment protein 3-like isoform X1

1.5e-45

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Query:  MDAIFGKLRNLDAYPKINEDFYKRTFSGGIITLASSFIMLFLFFSELRLYLHATTETKLIVDTSRGGKLHINFDMSFPAIPCSILSLDAIDISGEQHLDI
        MDAIF +LRNLDAYPKINEDFY+RTFSGGIIT+ASSFIMLFLFFSELRLYLHA TET+LIVDTSRGGKLHINFDMSFPAIPCSILS+DAID+SGEQHLDI
Subjt:  MDAIFGKLRNLDAYPKINEDFYKRTFSGGIITLASSFIMLFLFFSELRLYLHATTETKLIVDTSRGGKLHINFDMSFPAIPCSILSLDAIDISGEQHLDI

A0A6J1FWE5 endoplasmic reticulum-Golgi intermediate compartment protein 3-like isoform X2

6.9e-46

91.09

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Query:  MDAIFGKLRNLDAYPKINEDFYKRTFSGGIITLASSFIMLFLFFSELRLYLHATTETKLIVDTSRGGKLHINFDMSFPAIPCSILSLDAIDISGEQHLDI
        MDAIF +LRNLDAYPKINEDFY+RTFSGGIIT+ASSFIMLFLFFSELRLYLHA TET+LIVDTSRGGKLHINFDMSFPAIPCSILS+DAID+SGEQHLDI
Subjt:  MDAIFGKLRNLDAYPKINEDFYKRTFSGGIITLASSFIMLFLFFSELRLYLHATTETKLIVDTSRGGKLHINFDMSFPAIPCSILSLDAIDISGEQHLDI

Query:  V
        +
Subjt:  V

A0A6J1J9X3 endoplasmic reticulum-Golgi intermediate compartment protein 3-like isoform X2

1.3e-44

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Query:  MDAIFGKLRNLDAYPKINEDFYKRTFSGGIITLASSFIMLFLFFSELRLYLHATTETKLIVDTSRGGKLHINFDMSFPAIPCSILSLDAIDISGEQHLDI
        MDAIF KLRNLDAYPKINEDFY+RTFSGG+ITLASSFIMLFLFFSELRLYLHA TETKL+VDTSRGG LHINFD+SFP IPCSIL LDAIDISGEQHLDI
Subjt:  MDAIFGKLRNLDAYPKINEDFYKRTFSGGIITLASSFIMLFLFFSELRLYLHATTETKLIVDTSRGGKLHINFDMSFPAIPCSILSLDAIDISGEQHLDI

A0A6J1JN88 endoplasmic reticulum-Golgi intermediate compartment protein 3-like isoform X2

3.4e-45

89.11

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Query:  MDAIFGKLRNLDAYPKINEDFYKRTFSGGIITLASSFIMLFLFFSELRLYLHATTETKLIVDTSRGGKLHINFDMSFPAIPCSILSLDAIDISGEQHLDI
        MDAIF +LRNLDAYPKINEDF++RTFSGG+IT+ASSFIMLFLFFSELRLYLHA TET+LIVDTSRGGKLHINFDMSFPAIPCSILS+DAID+SGEQHLDI
Subjt:  MDAIFGKLRNLDAYPKINEDFYKRTFSGGIITLASSFIMLFLFFSELRLYLHATTETKLIVDTSRGGKLHINFDMSFPAIPCSILSLDAIDISGEQHLDI

Query:  V
        +
Subjt:  V

A0A6J1JQ68 endoplasmic reticulum-Golgi intermediate compartment protein 3-like isoform X1

7.6e-45

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Query:  MDAIFGKLRNLDAYPKINEDFYKRTFSGGIITLASSFIMLFLFFSELRLYLHATTETKLIVDTSRGGKLHINFDMSFPAIPCSILSLDAIDISGEQHLDI
        MDAIF +LRNLDAYPKINEDF++RTFSGG+IT+ASSFIMLFLFFSELRLYLHA TET+LIVDTSRGGKLHINFDMSFPAIPCSILS+DAID+SGEQHLDI
Subjt:  MDAIFGKLRNLDAYPKINEDFYKRTFSGGIITLASSFIMLFLFFSELRLYLHATTETKLIVDTSRGGKLHINFDMSFPAIPCSILSLDAIDISGEQHLDI

SwissProt top hits

e value

%identity

Alignment

Q4R8X1 Endoplasmic reticulum-Golgi intermediate compartment protein 3

5.1e-22

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Query:  MDAIFGKLRNLDAYPKINEDFYKRTFSGGIITLASSFIMLFLFFSELRLYLHATTETKLIVDTSRGGKLHINFDMSFPAIPCSILSLDAIDISGEQHLDI
        M+A+ GKL+  DAYPK  EDF  +T  G  +T+ S  +ML LF SEL+ YL      +L VD SRG KL IN D+ FP +PC+ LS+DA+D++GEQ LD+
Subjt:  MDAIFGKLRNLDAYPKINEDFYKRTFSGGIITLASSFIMLFLFFSELRLYLHATTETKLIVDTSRGGKLHINFDMSFPAIPCSILSLDAIDISGEQHLDI

Q66KH2 Endoplasmic reticulum-Golgi intermediate compartment protein 3

3.0e-22

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Query:  KLRNLDAYPKINEDFYKRTFSGGIITLASSFIMLFLFFSELRLYLHATTETKLIVDTSRGGKLHINFDMSFPAIPCSILSLDAIDISGEQHLDIVRAASI
        +LR  DAYPK  EDF  +T  G ++T+ S  IML LFFSEL+ YL      +L VD SRG KL IN D+ FP +PC+ LS+DA+D++GEQ LD+      
Subjt:  KLRNLDAYPKINEDFYKRTFSGGIITLASSFIMLFLFFSELRLYLHATTETKLIVDTSRGGKLHINFDMSFPAIPCSILSLDAIDISGEQHLDIVRAASI

Query:  STLSLD
          L LD
Subjt:  STLSLD

Q803I2 Endoplasmic reticulum-Golgi intermediate compartment protein 3

2.7e-23

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Query:  MDAIFGKLRNLDAYPKINEDFYKRTFSGGIITLASSFIMLFLFFSELRLYLHATTETKLIVDTSRGGKLHINFDMSFPAIPCSILSLDAIDISGEQHLDI
        MDA+  KL+  DAYPK  EDF  +T  G  +T+ S  IML LFFSEL+ YL      +L VDTSRG KL IN D+ FP +PC+ LS+DA+D++GEQ LD+
Subjt:  MDAIFGKLRNLDAYPKINEDFYKRTFSGGIITLASSFIMLFLFFSELRLYLHATTETKLIVDTSRGGKLHINFDMSFPAIPCSILSLDAIDISGEQHLDI

Q9CQE7 Endoplasmic reticulum-Golgi intermediate compartment protein 3

5.1e-22

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Query:  MDAIFGKLRNLDAYPKINEDFYKRTFSGGIITLASSFIMLFLFFSELRLYLHATTETKLIVDTSRGGKLHINFDMSFPAIPCSILSLDAIDISGEQHLDI
        M+A+ GKL+  DAYPK  EDF  +T  G  +T+ S  +ML LF SEL+ YL      +L VD SRG KL IN D+ FP +PC+ LS+DA+D++GEQ LD+
Subjt:  MDAIFGKLRNLDAYPKINEDFYKRTFSGGIITLASSFIMLFLFFSELRLYLHATTETKLIVDTSRGGKLHINFDMSFPAIPCSILSLDAIDISGEQHLDI

Q9Y282 Endoplasmic reticulum-Golgi intermediate compartment protein 3

5.1e-22

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Query:  MDAIFGKLRNLDAYPKINEDFYKRTFSGGIITLASSFIMLFLFFSELRLYLHATTETKLIVDTSRGGKLHINFDMSFPAIPCSILSLDAIDISGEQHLDI
        M+A+ GKL+  DAYPK  EDF  +T  G  +T+ S  +ML LF SEL+ YL      +L VD SRG KL IN D+ FP +PC+ LS+DA+D++GEQ LD+
Subjt:  MDAIFGKLRNLDAYPKINEDFYKRTFSGGIITLASSFIMLFLFFSELRLYLHATTETKLIVDTSRGGKLHINFDMSFPAIPCSILSLDAIDISGEQHLDI

Arabidopsis top hits

e value

%identity

Alignment

AT1G22200.1 Endoplasmic reticulum vesicle transporter protein

8.9e-38

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Query:  MDAIFGKLRNLDAYPKINEDFYKRTFSGGIITLASSFIMLFLFFSELRLYLHATTETKLIVDTSRGGKLHINFDMSFPAIPCSILSLDAIDISGEQHLDI
        M  +  +LRNLDAYPKINEDFY+RT SGG+ITLASS +ML LFFSEL+LY+H  TET+L VDTSRG KL INFD++FPA+ CSI+SLD++DISGE+HLD+
Subjt:  MDAIFGKLRNLDAYPKINEDFYKRTFSGGIITLASSFIMLFLFFSELRLYLHATTETKLIVDTSRGGKLHINFDMSFPAIPCSILSLDAIDISGEQHLDI

AT1G22200.2 Endoplasmic reticulum vesicle transporter protein

8.9e-38

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Query:  MDAIFGKLRNLDAYPKINEDFYKRTFSGGIITLASSFIMLFLFFSELRLYLHATTETKLIVDTSRGGKLHINFDMSFPAIPCSILSLDAIDISGEQHLDI
        M  +  +LRNLDAYPKINEDFY+RT SGG+ITLASS +ML LFFSEL+LY+H  TET+L VDTSRG KL INFD++FPA+ CSI+SLD++DISGE+HLD+
Subjt:  MDAIFGKLRNLDAYPKINEDFYKRTFSGGIITLASSFIMLFLFFSELRLYLHATTETKLIVDTSRGGKLHINFDMSFPAIPCSILSLDAIDISGEQHLDI

AT1G36050.1 Endoplasmic reticulum vesicle transporter protein

3.1e-38

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Query:  MDAIFGKLRNLDAYPKINEDFYKRTFSGGIITLASSFIMLFLFFSELRLYLHATTETKLIVDTSRGGKLHINFDMSFPAIPCSILSLDAIDISGEQHLDI
        M  I  KLRNLDAYPKINEDFY RT SGG+ITL SS +M  LFFSELRLYLH  TETKLIVDTSRG  L INFD++FPA+ CSILS+DA+DISGE HLD+
Subjt:  MDAIFGKLRNLDAYPKINEDFYKRTFSGGIITLASSFIMLFLFFSELRLYLHATTETKLIVDTSRGGKLHINFDMSFPAIPCSILSLDAIDISGEQHLDI

AT1G36050.2 Endoplasmic reticulum vesicle transporter protein

3.1e-38

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Query:  MDAIFGKLRNLDAYPKINEDFYKRTFSGGIITLASSFIMLFLFFSELRLYLHATTETKLIVDTSRGGKLHINFDMSFPAIPCSILSLDAIDISGEQHLDI
        M  I  KLRNLDAYPKINEDFY RT SGG+ITL SS +M  LFFSELRLYLH  TETKLIVDTSRG  L INFD++FPA+ CSILS+DA+DISGE HLD+
Subjt:  MDAIFGKLRNLDAYPKINEDFYKRTFSGGIITLASSFIMLFLFFSELRLYLHATTETKLIVDTSRGGKLHINFDMSFPAIPCSILSLDAIDISGEQHLDI

AT3G22290.1 Endoplasmic reticulum vesicle transporter protein

1.1e-16

39.78

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Query:  LRNLDAYPKINEDFYKRTFSGGIITLASSFIMLFLFFSELRLYLHATTETKLIVDTSRGGKLHINFDMSFPAIPCSILSLDAIDISGEQHLDI
        LR++DA+P+  +   ++T SG ++++    IM  LF  EL  YL+  T  ++ VD  RG  L I+ +M+FP++PC +LS+DAID+SG+  +D+
Subjt:  LRNLDAYPKINEDFYKRTFSGGIITLASSFIMLFLFFSELRLYLHATTETKLIVDTSRGGKLHINFDMSFPAIPCSILSLDAIDISGEQHLDI

Sequences

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CDS sequence

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ATGGATGCCATCTTCGGCAAGCTTCGCAATTTGGATGCTTACCCTAAAATCAATGAAGATTTCTACAAGCGGACCTTTTCCGGTGGCATAATCACCCTCGCCTCCTCCTT
TATCATGCTCTTCCTCTTCTTCTCTGAGCTAAGATTGTACCTCCATGCTACAACTGAGACAAAGCTCATTGTAGATACATCAAGGGGGGGAAAGTTACACATAAATTTTG
ATATGAGTTTTCCTGCGATTCCGTGTTCTATTCTCAGTCTTGATGCCATAGATATCAGTGGAGAGCAACATCTTGATATAGTACGTGCTGCAAGCATCAGTACTTTGTCT
CTGGATCTCTGA

mRNA sequence

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Protein sequence

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MDAIFGKLRNLDAYPKINEDFYKRTFSGGIITLASSFIMLFLFFSELRLYLHATTETKLIVDTSRGGKLHINFDMSFPAIPCSILSLDAIDISGEQHLDIVRAASISTLS
LDL

Spg002677 (gene) of Sponge gourd (cylindrica) v1 genome