CuGenDBv2

Gene ID	Spg002746
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	RAB6-interacting golgin
Genome location	scaffold6:1882657..1885615
RNA-Seq Expression	Spg002746
Synteny	Spg002746
Gene Ontology terms	GO:0005794 - Golgi apparatus (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6574142.1 hypothetical protein SDJN03_28029, partial [Cucurbita argyrosperma subsp. sororia]

8.7e-115

90.38

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Query:  MGSDPSLLPEIGPDGLAREAPVIAYTEKVIEEGSLQLRKYIEENYSKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKV
        MGSDP LLPEIGPDGLAREAPVIAYTEK+IEEG LQLRKYI+ENYSKIRDVERELA LTMEMKLTSGPKKAALELLRKKIEMSTER+ AAKLKEEQAKK 
Subjt:  MGSDPSLLPEIGPDGLAREAPVIAYTEKVIEEGSLQLRKYIEENYSKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKV

Query:  WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSNVTQEGKAMGSSQNSRVADSSGVPTSTE-TGAKANEKAPNQGG
        WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVS VTQEG+ MG++QNSRVADSSGV TSTE TGAKANE A  Q  
Subjt:  WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSNVTQEGKAMGSSQNSRVADSSGVPTSTE-TGAKANEKAPNQGG

Query:  SGDGPVMNGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSSAESGWTGSGFDVDGRV
        SGD PV+NGQNQKP SETE RGKKKNQFHGRGKGIGAVPKGRSSA+SGWTGSGFDVDGRV
Subjt:  SGDGPVMNGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSSAESGWTGSGFDVDGRV

KAG7013196.1 hypothetical protein SDJN02_25953 [Cucurbita argyrosperma subsp. argyrosperma]

1.9e-114

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Query:  MGSDPSLLPEIGPDGLAREAPVIAYTEKVIEEGSLQLRKYIEENYSKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKV
        MGSDP LLPEIGPDGLAREAPVIAYTEK+IEEG LQLRKYI+ENYSKIRDVERELA LTMEMKLTSGPKKAALELLRKKIEMSTER+ AAKLKEEQAKK 
Subjt:  MGSDPSLLPEIGPDGLAREAPVIAYTEKVIEEGSLQLRKYIEENYSKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKV

Query:  WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSNVTQEGKAMGSSQNSRVADSSGVPTSTE-TGAKANEKAPNQGG
        WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVS VTQEG+ MG++QNSRVADSSGV TSTE TGAKANE A  Q  
Subjt:  WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSNVTQEGKAMGSSQNSRVADSSGVPTSTE-TGAKANEKAPNQGG

Query:  SGDGPVMNGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSSAESGWTGSGFDVDGRV
        SGD PV+NGQNQKP SETE RGK+KNQFHGRGKGIGAVPKGRSSA+SGWTGSGFDVDGRV
Subjt:  SGDGPVMNGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSSAESGWTGSGFDVDGRV

XP_022945967.1 uncharacterized protein LOC111450054 [Cucurbita moschata]

8.7e-115

90.38

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Query:  MGSDPSLLPEIGPDGLAREAPVIAYTEKVIEEGSLQLRKYIEENYSKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKV
        MGSDP LLPEIGPDGLAREAPVIAYTEK+IEEG LQLRKYI+ENYSKIRDVERELA LTMEMKLTSGPKKAALELLRKKIEMSTER+ AAKLKEEQAKK 
Subjt:  MGSDPSLLPEIGPDGLAREAPVIAYTEKVIEEGSLQLRKYIEENYSKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKV

Query:  WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSNVTQEGKAMGSSQNSRVADSSGVPTSTE-TGAKANEKAPNQGG
        WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVS VTQEG+ MG++QNSRVADSSGV TSTE TGAKANE A  Q  
Subjt:  WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSNVTQEGKAMGSSQNSRVADSSGVPTSTE-TGAKANEKAPNQGG

Query:  SGDGPVMNGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSSAESGWTGSGFDVDGRV
        SGD PV+NGQNQKP SETE RGKKKNQFHGRGKGIGAVPKGRSSA+SGWTGSGFDVDGRV
Subjt:  SGDGPVMNGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSSAESGWTGSGFDVDGRV

XP_022968531.1 uncharacterized protein LOC111467736 [Cucurbita maxima]

3.3e-114

90.38

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Query:  MGSDPSLLPEIGPDGLAREAPVIAYTEKVIEEGSLQLRKYIEENYSKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKV
        MGSDP LLPEIGPDGLAREAPVIAYTEK+IEEG LQLRKYI+ENYSKIRDVERELA LTMEMKLTSGPKKAALELLRKKIEMSTER+ AAKLKEEQAKK 
Subjt:  MGSDPSLLPEIGPDGLAREAPVIAYTEKVIEEGSLQLRKYIEENYSKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKV

Query:  WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSNVTQEGKAMGSSQNSRVADSSGVPTSTE-TGAKANEKAPNQGG
        WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVS VTQEG+ M S+QNSRVADSSGV TSTE TGAKANE A  Q  
Subjt:  WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSNVTQEGKAMGSSQNSRVADSSGVPTSTE-TGAKANEKAPNQGG

Query:  SGDGPVMNGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSSAESGWTGSGFDVDGRV
        SGD PV+NGQNQKP SETE RGKKKNQFHGRGKGIGAVPKGRSSA+SGWTGSGFDVDGRV
Subjt:  SGDGPVMNGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSSAESGWTGSGFDVDGRV

XP_023541472.1 uncharacterized protein LOC111801645 [Cucurbita pepo subsp. pepo]

2.1e-113

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Query:  MGSDPSLLPEIGPDGLAREAPVIAYTEKVIEEGSLQLRKYIEENYSKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKV
        MGSDP LLPEIGPDGLAREAPVIAYTEK+IEEG LQLRKYI+ENYSKIRDVERELA LTMEMKLTSGPKKAALE LRKKIEMSTER+ AAKLKEEQAKK 
Subjt:  MGSDPSLLPEIGPDGLAREAPVIAYTEKVIEEGSLQLRKYIEENYSKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKV

Query:  WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSNVTQEGKAMGSSQNSRVADSSGVPTSTE-TGAKANEKAPNQGG
        WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVS VTQEG+ MGS+QNSRVADSSGV TSTE TGAKANE A  Q  
Subjt:  WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSNVTQEGKAMGSSQNSRVADSSGVPTSTE-TGAKANEKAPNQGG

Query:  SGDGPVMNGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSSAESGWTGSGFDVDGRV
        SGD PV+NGQNQK  SETE RGKKKNQFHGRGKGIGAVPKGRSSA+SGWTGSGFDVDGRV
Subjt:  SGDGPVMNGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSSAESGWTGSGFDVDGRV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L8J1 RAB6-interacting golgin

1.8e-94

79.84

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Query:  MGSDPSLLPEIGPDGLAREAPVIAYTEKVIEEGSLQLRKYIEENYSKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKV
        MGSDPSLLP                   +IEEGSLQLRK I+EN SKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKV
Subjt:  MGSDPSLLPEIGPDGLAREAPVIAYTEKVIEEGSLQLRKYIEENYSKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKV

Query:  WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSNVTQEGKAMGSSQNSRVADSSGVPTSTETGAKANEKAPNQGGS
        WEAASKVVQ+EEA KQKLC+DLNHLVQES+N QLTRLEELKRRMEALNS+RVSTSVS+   +   MG +QNSRV+DSSGV T+TETGAK NE  PNQ  S
Subjt:  WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSNVTQEGKAMGSSQNSRVADSSGVPTSTETGAKANEKAPNQGGS

Query:  GDGPVMNGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSSAESGWTGSGFDVDGR
           PV+NGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSSA+SGWTGSGFDVDGR
Subjt:  GDGPVMNGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSSAESGWTGSGFDVDGR

A0A5D3DFA0 RAB6-interacting golgin

2.4e-110

87.98

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Query:  MGSDPSLLPEIGPDGLAREAPVIAYTEKVIEEGSLQLRKYIEENYSKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKV
        MGSDPSLLPEIGPDGLAREAPVIAYTEK+IEEGSLQLRK I+EN SKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKV
Subjt:  MGSDPSLLPEIGPDGLAREAPVIAYTEKVIEEGSLQLRKYIEENYSKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKV

Query:  WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSNVTQEGKAMGSSQNSRVADSSGVPTSTETGAKANEKAPNQGGS
        WEAASKVVQDEEA KQKLC+DLNHLVQES+N QLTRLEELKRRMEALNS+RVSTSVS+   + KAMG +QNSRV+DSS V T+TETGAK NE  PNQ  S
Subjt:  WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSNVTQEGKAMGSSQNSRVADSSGVPTSTETGAKANEKAPNQGGS

Query:  GDGPVMNGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSSAESGWTGSGFDVDGR
           PV+NGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSSA+SGWTGSGFDVDGR
Subjt:  GDGPVMNGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSSAESGWTGSGFDVDGR

A0A6J1CI49 uncharacterized protein LOC111011714

9.4e-107

84.41

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Query:  MGSDPSLLPEIGPDGLAREAPVIAYTEKVIEEGSLQLRKYIEENYSKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKV
        M S+PSLLPEIGPDGLA E+PVIAYTEK+IEE  LQLRKYIEENYSKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEM+TER+RAAKLKEEQAK+ 
Subjt:  MGSDPSLLPEIGPDGLAREAPVIAYTEKVIEEGSLQLRKYIEENYSKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKV

Query:  WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSNVTQEGKAMGSSQNSRVADSSGVPTSTETG--AKANEKAPNQG
        WEAASKVVQDEE IKQKLC+DLNHLVQES+NSQLTRLEELKRRMEALN  RVSTSVS    +GK +G +QNSRV+DSSG PTSTETG  A+ANE APNQG
Subjt:  WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSNVTQEGKAMGSSQNSRVADSSGVPTSTETG--AKANEKAPNQG

Query:  GSGDG--PVMNGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSSAESGWTGSGFDVDGRV
         +  G  PVMNGQNQKPPSE EGRGKKKNQ HGRGKGIGAVPKGRSS +SGWTGSGFDVDGRV
Subjt:  GSGDG--PVMNGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSSAESGWTGSGFDVDGRV

A0A6J1G2D4 uncharacterized protein LOC111450054

4.2e-115

90.38

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Query:  MGSDPSLLPEIGPDGLAREAPVIAYTEKVIEEGSLQLRKYIEENYSKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKV
        MGSDP LLPEIGPDGLAREAPVIAYTEK+IEEG LQLRKYI+ENYSKIRDVERELA LTMEMKLTSGPKKAALELLRKKIEMSTER+ AAKLKEEQAKK 
Subjt:  MGSDPSLLPEIGPDGLAREAPVIAYTEKVIEEGSLQLRKYIEENYSKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKV

Query:  WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSNVTQEGKAMGSSQNSRVADSSGVPTSTE-TGAKANEKAPNQGG
        WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVS VTQEG+ MG++QNSRVADSSGV TSTE TGAKANE A  Q  
Subjt:  WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSNVTQEGKAMGSSQNSRVADSSGVPTSTE-TGAKANEKAPNQGG

Query:  SGDGPVMNGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSSAESGWTGSGFDVDGRV
        SGD PV+NGQNQKP SETE RGKKKNQFHGRGKGIGAVPKGRSSA+SGWTGSGFDVDGRV
Subjt:  SGDGPVMNGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSSAESGWTGSGFDVDGRV

A0A6J1HV58 uncharacterized protein LOC111467736

1.6e-114

90.38

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Query:  MGSDPSLLPEIGPDGLAREAPVIAYTEKVIEEGSLQLRKYIEENYSKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKV
        MGSDP LLPEIGPDGLAREAPVIAYTEK+IEEG LQLRKYI+ENYSKIRDVERELA LTMEMKLTSGPKKAALELLRKKIEMSTER+ AAKLKEEQAKK 
Subjt:  MGSDPSLLPEIGPDGLAREAPVIAYTEKVIEEGSLQLRKYIEENYSKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKV

Query:  WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSNVTQEGKAMGSSQNSRVADSSGVPTSTE-TGAKANEKAPNQGG
        WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVS VTQEG+ M S+QNSRVADSSGV TSTE TGAKANE A  Q  
Subjt:  WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSNVTQEGKAMGSSQNSRVADSSGVPTSTE-TGAKANEKAPNQGG

Query:  SGDGPVMNGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSSAESGWTGSGFDVDGRV
        SGD PV+NGQNQKP SETE RGKKKNQFHGRGKGIGAVPKGRSSA+SGWTGSGFDVDGRV
Subjt:  SGDGPVMNGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSSAESGWTGSGFDVDGRV

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G51840.1 unknown protein

1.1e-67

60.08

Show/hide

Query:  MGSDPSLLPEIGPDGLAREAPVIAYTEKVIEEGSLQLRKYIEENYSKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKV
        M SDP L  EIG DGLAREAPVIAYTEK+IEE  +QLRKYIEENY+KIRDVERE  NL+ME+KLT+GPKKAA+E LRKKIE+STER+ AAKLKEE+A+K 
Subjt:  MGSDPSLLPEIGPDGLAREAPVIAYTEKVIEEGSLQLRKYIEENYSKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKV

Query:  WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSNVTQEGKAMGSSQNSRVADSSGVPTSTETGAKANEKAPNQGGS
        +EAASKVV+DEEA KQ LC+DLN LVQ+S+N+Q  RLEELKRR+EALN NR STS+  V +        +   V DS+    + +T      K  N  G+
Subjt:  WEAASKVVQDEEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSNVTQEGKAMGSSQNSRVADSSGVPTSTETGAKANEKAPNQGGS

Query:  GDGPVMNGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSSAESGWTGSGFDVDGR
         +G   +GQ +   +E E + KKK Q  GRG+GIG + KGR     GWTG+GFDVDGR
Subjt:  GDGPVMNGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSSAESGWTGSGFDVDGR

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGTTCCGATCCCTCTCTTTTGCCCGAAATTGGTCCCGATGGCCTTGCCAGAGAAGCTCCTGTAATTGCCTACACCGAAAAGGTAATCGAGGAAGGCAGTCTTCAATT
GAGAAAATATATCGAAGAGAATTATTCTAAAATTCGAGATGTTGAACGAGAGTTGGCAAATCTTACAATGGAGATGAAACTCACATCTGGACCAAAAAAAGCAGCACTTG
AACTTTTGCGGAAGAAAATAGAAATGTCAACAGAGAGAGTACGTGCAGCCAAGTTGAAGGAAGAACAAGCAAAGAAGGTTTGGGAAGCAGCATCAAAGGTAGTGCAGGAC
GAGGAAGCAATTAAGCAAAAGCTGTGTGATGACTTGAATCATCTGGTTCAAGAAAGCAATAATTCACAGTTGACGAGACTGGAAGAACTAAAACGGCGAATGGAGGCTTT
GAATTCAAATCGAGTATCGACGTCTGTTTCTAATGTTACACAGGAAGGCAAAGCAATGGGAAGCTCTCAGAATAGCAGAGTTGCAGATTCTTCTGGAGTTCCTACATCAA
CAGAAACAGGTGCAAAAGCAAATGAAAAGGCCCCTAATCAAGGAGGCAGTGGTGATGGTCCAGTGATGAATGGGCAAAATCAAAAGCCCCCTTCTGAGACAGAAGGAAGA
GGGAAAAAGAAAAACCAGTTTCATGGAAGAGGGAAGGGAATTGGAGCAGTGCCTAAAGGAAGAAGCTCAGCCGAATCTGGCTGGACTGGCTCTGGGTTTGATGTGGATGG
TAGGGTATGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MGSDPSLLPEIGPDGLAREAPVIAYTEKVIEEGSLQLRKYIEENYSKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKVWEAASKVVQD
EEAIKQKLCDDLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSNVTQEGKAMGSSQNSRVADSSGVPTSTETGAKANEKAPNQGGSGDGPVMNGQNQKPPSETEGR
GKKKNQFHGRGKGIGAVPKGRSSAESGWTGSGFDVDGRV

Spg002746 (gene) of Sponge gourd (cylindrica) v1 genome