; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg002759 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg002759
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like
Genome locationscaffold6:2105877..2106842
RNA-Seq ExpressionSpg002759
SyntenySpg002759
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576777.1 ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]5.8e-0854.12Show/hide
Query:  MAVTCMNSRSLPQALYFLSIQSNHRTSEQKTPIL----LIEFMLAIKRSKATHSFSKFDRRATIATVSFSLPTPKIGWHFPSETP
        MA T MNS SL    + L  QSN  + E KT  L    LI+  LAIKRS ATHS SKF RRAT ATVSFSLP  K     P + P
Subjt:  MAVTCMNSRSLPQALYFLSIQSNHRTSEQKTPIL----LIEFMLAIKRSKATHSFSKFDRRATIATVSFSLPTPKIGWHFPSETP

XP_022141304.1 ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like [Momordica charantia]3.4e-0852.94Show/hide
Query:  MAVTCMNSRSLPQALYFLSIQSNHRTSEQKTPIL----LIEFMLAIKRSKATHSFSKFDRRATIATVSFSLPTPKIGWHFPSETP
        MA T +NS SL Q  + L+ QSN    E KT  L    L E  LAIKRS  THS SKF RRAT ATVSFSLP  K     P + P
Subjt:  MAVTCMNSRSLPQALYFLSIQSNHRTSEQKTPIL----LIEFMLAIKRSKATHSFSKFDRRATIATVSFSLPTPKIGWHFPSETP

XP_022945169.1 ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like [Cucurbita moschata]1.3e-0752.94Show/hide
Query:  MAVTCMNSRSLPQALYFLSIQSNHRTSEQKTPIL----LIEFMLAIKRSKATHSFSKFDRRATIATVSFSLPTPKIGWHFPSETP
        MA T MNS SL    + L IQS   + EQKT  L    L E  LAIKRS ATH   KF RRAT ATVSFSLP  K     P + P
Subjt:  MAVTCMNSRSLPQALYFLSIQSNHRTSEQKTPIL----LIEFMLAIKRSKATHSFSKFDRRATIATVSFSLPTPKIGWHFPSETP

XP_022968478.1 ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like [Cucurbita maxima]1.3e-0752.94Show/hide
Query:  MAVTCMNSRSLPQALYFLSIQSNHRTSEQKTPIL----LIEFMLAIKRSKATHSFSKFDRRATIATVSFSLPTPKIGWHFPSETP
        MA T MNS SL    + L IQS   + EQKT  L    L E  LAIKRS ATH   KF RRAT ATVSFSLP  K     P + P
Subjt:  MAVTCMNSRSLPQALYFLSIQSNHRTSEQKTPIL----LIEFMLAIKRSKATHSFSKFDRRATIATVSFSLPTPKIGWHFPSETP

XP_023552673.1 ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like [Cucurbita pepo subsp. pepo]5.8e-0854.12Show/hide
Query:  MAVTCMNSRSLPQALYFLSIQSNHRTSEQKTPIL----LIEFMLAIKRSKATHSFSKFDRRATIATVSFSLPTPKIGWHFPSETP
        MA T MNS SL    + L  QSN  + E KT  L    LI+  LAIKRS ATHS SKF RRAT ATVSFSLP  K     P + P
Subjt:  MAVTCMNSRSLPQALYFLSIQSNHRTSEQKTPIL----LIEFMLAIKRSKATHSFSKFDRRATIATVSFSLPTPKIGWHFPSETP

TrEMBL top hitse value%identityAlignment
A0A5D3E3F8 ATP-dependent Clp protease ATP-binding subunit CLPT16.9e-0752.33Show/hide
Query:  MAVTCMNSRSLPQALYFLSIQSNHRTSEQKTPIL-----LIEFMLAIKRSKATHSFSKFDRRATIATVSFSLPTPKIGWHFPSETP
        MA T +NS S  Q    L  QSN  + E K P+L     LIE  LAIKRS ATH  SKF RRAT ATVSFSLP  K     P + P
Subjt:  MAVTCMNSRSLPQALYFLSIQSNHRTSEQKTPIL-----LIEFMLAIKRSKATHSFSKFDRRATIATVSFSLPTPKIGWHFPSETP

A0A6J1CI79 ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like1.7e-0852.94Show/hide
Query:  MAVTCMNSRSLPQALYFLSIQSNHRTSEQKTPIL----LIEFMLAIKRSKATHSFSKFDRRATIATVSFSLPTPKIGWHFPSETP
        MA T +NS SL Q  + L+ QSN    E KT  L    L E  LAIKRS  THS SKF RRAT ATVSFSLP  K     P + P
Subjt:  MAVTCMNSRSLPQALYFLSIQSNHRTSEQKTPIL----LIEFMLAIKRSKATHSFSKFDRRATIATVSFSLPTPKIGWHFPSETP

A0A6J1E4F8 ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like1.1e-0754.12Show/hide
Query:  MAVTCMNSRSLPQALYFLSIQSNHRTSEQKTPIL----LIEFMLAIKRSKATHSFSKFDRRATIATVSFSLPTPKIGWHFPSETP
        MA T MNS SL      L  QSN  + E KT  L    LI+  LAIKRS ATHS SKF RRAT ATVSFSLP  K     P + P
Subjt:  MAVTCMNSRSLPQALYFLSIQSNHRTSEQKTPIL----LIEFMLAIKRSKATHSFSKFDRRATIATVSFSLPTPKIGWHFPSETP

A0A6J1G082 ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like6.3e-0852.94Show/hide
Query:  MAVTCMNSRSLPQALYFLSIQSNHRTSEQKTPIL----LIEFMLAIKRSKATHSFSKFDRRATIATVSFSLPTPKIGWHFPSETP
        MA T MNS SL    + L IQS   + EQKT  L    L E  LAIKRS ATH   KF RRAT ATVSFSLP  K     P + P
Subjt:  MAVTCMNSRSLPQALYFLSIQSNHRTSEQKTPIL----LIEFMLAIKRSKATHSFSKFDRRATIATVSFSLPTPKIGWHFPSETP

A0A6J1HY47 ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like6.3e-0852.94Show/hide
Query:  MAVTCMNSRSLPQALYFLSIQSNHRTSEQKTPIL----LIEFMLAIKRSKATHSFSKFDRRATIATVSFSLPTPKIGWHFPSETP
        MA T MNS SL    + L IQS   + EQKT  L    L E  LAIKRS ATH   KF RRAT ATVSFSLP  K     P + P
Subjt:  MAVTCMNSRSLPQALYFLSIQSNHRTSEQKTPIL----LIEFMLAIKRSKATHSFSKFDRRATIATVSFSLPTPKIGWHFPSETP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCTTTCATGGCTTCTAATGGCAGTTACTTGCATGAATTCTCGTTCGCTTCCACAAGCCCTATATTTCCTGTCTATTCAATCTAATCACCGCACTTCAGAACAGAA
AACTCCAATCCTTCTTATAGAGTTCATGCTCGCAATCAAGCGTTCTAAGGCAACCCATTCGTTCTCGAAGTTCGATCGCCGTGCCACCATTGCCACTGTATCGTTTAGCC
TCCCGACTCCGAAAATCGGTTGGCACTTCCCCTCAGAAACCCCCAACGATTTGACATTGCAGGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCTTTCATGGCTTCTAATGGCAGTTACTTGCATGAATTCTCGTTCGCTTCCACAAGCCCTATATTTCCTGTCTATTCAATCTAATCACCGCACTTCAGAACAGAA
AACTCCAATCCTTCTTATAGAGTTCATGCTCGCAATCAAGCGTTCTAAGGCAACCCATTCGTTCTCGAAGTTCGATCGCCGTGCCACCATTGCCACTGTATCGTTTAGCC
TCCCGACTCCGAAAATCGGTTGGCACTTCCCCTCAGAAACCCCCAACGATTTGACATTGCAGGCTTGA
Protein sequenceShow/hide protein sequence
MKLSWLLMAVTCMNSRSLPQALYFLSIQSNHRTSEQKTPILLIEFMLAIKRSKATHSFSKFDRRATIATVSFSLPTPKIGWHFPSETPNDLTLQA