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Spg002789 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg002789
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptioncytochrome b-c1 complex subunit 6-like
Genome locationscaffold6:5096383..5103258
RNA-Seq ExpressionSpg002789
SyntenySpg002789
Gene Ontology termsGO:0006122 - mitochondrial electron transport, ubiquinol to cytochrome c (biological process)
GO:0005750 - mitochondrial respiratory chain complex III (cellular component)
InterPro domainsIPR003422 - Cytochrome b-c1 complex, subunit 6
IPR023184 - Ubiquinol-cytochrome C reductase hinge domain
IPR036811 - Ubiquinol-cytochrome C reductase hinge domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650514.1 hypothetical protein Csa_011326 [Cucumis sativus]7.9e-3890.7Show/hide
Query:  QGFLARSFASSQYYLQAMADEEPVDQKRYLEEACKPKCVKSLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        Q FLA SF  SQY L AMADEEPVDQKRYLEEACKPKCVK LLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKL TKLK
Subjt:  QGFLARSFASSQYYLQAMADEEPVDQKRYLEEACKPKCVKSLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

KAG6576964.1 Cytochrome b-c1 complex subunit 6-1, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]1.8e-4293.41Show/hide
Query:  FVFQLQGFLARSFASSQYYLQAMADEEPVDQKRYLEEACKPKCVKSLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        FVFQLQGFL  SFA SQYYL AMADEEPVDQKRYLEEACKPKCVK LLEYQACVKRIQGD+SGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
Subjt:  FVFQLQGFLARSFASSQYYLQAMADEEPVDQKRYLEEACKPKCVKSLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

KAG6600342.1 Cytochrome b-c1 complex subunit 6-1, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]5.0e-4090.91Show/hide
Query:  QLQGFLARSFASSQYYLQAMADEEPVDQKRYLEEACKPKCVKSLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        +LQGFLA SFA SQ YL AMADEEPVDQKRYLEEACKPKCVK LLEYQACVKRIQGDDSGHKHCTGQYFDYWSC+DKCVAPKLFTK+K
Subjt:  QLQGFLARSFASSQYYLQAMADEEPVDQKRYLEEACKPKCVKSLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

KAG7014985.1 hypothetical protein SDJN02_22616, partial [Cucurbita argyrosperma subsp. argyrosperma]6.5e-4091.95Show/hide
Query:  LQGFLARSFASSQYYLQAMADEEPVDQKRYLEEACKPKCVKSLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        +QGFL  SFA SQYYL AMADEEPVDQKRYLEEACKPKCVK LLEYQACVKRIQGD+SGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
Subjt:  LQGFLARSFASSQYYLQAMADEEPVDQKRYLEEACKPKCVKSLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

XP_022942987.1 cytochrome b-c1 complex subunit 6-like [Cucurbita moschata]2.6e-4190.22Show/hide
Query:  RFVFQLQGFLARSFASSQYYLQAMADEEPVDQKRYLEEACKPKCVKSLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        RFV  LQGFLA SFA SQ YL AMADEEPVDQKRYLEEACKPKCVK LLEYQACVKRIQGDDSGHKHCTGQYFDYWSC+DKCVAPKLFTK+K
Subjt:  RFVFQLQGFLARSFASSQYYLQAMADEEPVDQKRYLEEACKPKCVKSLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

TrEMBL top hitse value%identityAlignment
A0A1S3C350 Cytochrome b-c1 complex subunit 67.5e-3498.55Show/hide
Query:  MADEEPVDQKRYLEEACKPKCVKSLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        MADEEPVDQKRYLEEACKPKCVK LLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
Subjt:  MADEEPVDQKRYLEEACKPKCVKSLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

A0A5J5BSE3 UCR_hinge domain-containing protein9.8e-3461.86Show/hide
Query:  APNRPGSAWSRVPQFLQIHCWCHVNVRFVFQLQGFLARSFASSQYYLQAMADEEPVDQKRYLEEACKPKCVKSLLEYQACVKRIQGDDSGHKHCTGQYFD
        +PN+  S    VP  L++   C +N++        L    A   ++  AMADEEPVD K+YLE+ACKPKCVK LLEYQACVKRIQGD++GHKHCTGQYFD
Subjt:  APNRPGSAWSRVPQFLQIHCWCHVNVRFVFQLQGFLARSFASSQYYLQAMADEEPVDQKRYLEEACKPKCVKSLLEYQACVKRIQGDDSGHKHCTGQYFD

Query:  YWSCIDKCVAPKLFTKLK
        YWSCIDKCVAPKLF+KLK
Subjt:  YWSCIDKCVAPKLFTKLK

A0A6J1FRR8 cytochrome b-c1 complex subunit 6-like1.3e-4190.22Show/hide
Query:  RFVFQLQGFLARSFASSQYYLQAMADEEPVDQKRYLEEACKPKCVKSLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        RFV  LQGFLA SFA SQ YL AMADEEPVDQKRYLEEACKPKCVK LLEYQACVKRIQGDDSGHKHCTGQYFDYWSC+DKCVAPKLFTK+K
Subjt:  RFVFQLQGFLARSFASSQYYLQAMADEEPVDQKRYLEEACKPKCVKSLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

A0A6J1J694 Cytochrome b-c1 complex subunit 61.7e-3395.65Show/hide
Query:  MADEEPVDQKRYLEEACKPKCVKSLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        MADEEPVDQKRYLEEACKPKCVK LLEYQACVKRIQGDDSGHKHCTGQYFDYWSC+DKCVAPKLFTK+K
Subjt:  MADEEPVDQKRYLEEACKPKCVKSLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

A0A6J1J7A4 Cytochrome b-c1 complex subunit 62.2e-3397.1Show/hide
Query:  MADEEPVDQKRYLEEACKPKCVKSLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        MADEEPVDQKRYLEEACKPKCVK LLEYQACVKRIQGD+SGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
Subjt:  MADEEPVDQKRYLEEACKPKCVKSLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

SwissProt top hitse value%identityAlignment
P48504 Cytochrome b-c1 complex subunit 63.2e-2673.91Show/hide
Query:  MADEEPVDQKRYLEEACKPKCVKSLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        M+DEE VD K  LE +CKPKCV+ L EYQAC KR++GD+SGHKHCTGQYFDYW CIDKCVA KLF  LK
Subjt:  MADEEPVDQKRYLEEACKPKCVKSLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

Q0WWE3 Cytochrome b-c1 complex subunit 6-1, mitochondrial1.4e-3288.41Show/hide
Query:  MADEEPVDQKRYLEEACKPKCVKSLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        MAD+E VD K+YLEE+CKPKCVK LLEYQACVKRIQGDDSGHKHCTGQYFDYW CIDKCVAPKLF KLK
Subjt:  MADEEPVDQKRYLEEACKPKCVKSLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

Q1ZXP3 Probable cytochrome b-c1 complex subunit 61.5e-0744.83Show/hide
Query:  LEEACKPKCVKSLLEYQACVKRIQGDDSGHK-HCTGQYFDYWSCIDKCVAPKLFTKLK
        ++E C   C KS   YQAC  R+   +   K +C GQ+ ++  CIDKCV PKLF +LK
Subjt:  LEEACKPKCVKSLLEYQACVKRIQGDDSGHK-HCTGQYFDYWSCIDKCVAPKLFTKLK

Q9SJV7 Cytochrome b-c1 complex subunit 6-2, mitochondrial5.5e-2680.33Show/hide
Query:  MADEEPVDQKRYLEEACKPKCVKSLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVA
        M +E+ VDQKRY EE+CKPKCVK LLEYQACVKRIQ D+SGHKHCTGQYFDYW C+DKCV+
Subjt:  MADEEPVDQKRYLEEACKPKCVKSLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVA

Arabidopsis top hitse value%identityAlignment
AT1G15120.1 Ubiquinol-cytochrome C reductase hinge protein9.6e-3488.41Show/hide
Query:  MADEEPVDQKRYLEEACKPKCVKSLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        MAD+E VD K+YLEE+CKPKCVK LLEYQACVKRIQGDDSGHKHCTGQYFDYW CIDKCVAPKLF KLK
Subjt:  MADEEPVDQKRYLEEACKPKCVKSLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

AT1G15120.2 Ubiquinol-cytochrome C reductase hinge protein2.7e-2888.14Show/hide
Query:  MADEEPVDQKRYLEEACKPKCVKSLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKC
        MAD+E VD K+YLEE+CKPKCVK LLEYQACVKRIQGDDSGHKHCTGQYFDYW CIDKC
Subjt:  MADEEPVDQKRYLEEACKPKCVKSLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKC

AT2G01090.1 Ubiquinol-cytochrome C reductase hinge protein3.9e-2780.33Show/hide
Query:  MADEEPVDQKRYLEEACKPKCVKSLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVA
        M +E+ VDQKRY EE+CKPKCVK LLEYQACVKRIQ D+SGHKHCTGQYFDYW C+DKCV+
Subjt:  MADEEPVDQKRYLEEACKPKCVKSLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVA

AT2G01090.2 Ubiquinol-cytochrome C reductase hinge protein3.9e-2780.33Show/hide
Query:  MADEEPVDQKRYLEEACKPKCVKSLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVA
        M +E+ VDQKRY EE+CKPKCVK LLEYQACVKRIQ D+SGHKHCTGQYFDYW C+DKCV+
Subjt:  MADEEPVDQKRYLEEACKPKCVKSLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCGACCATTTGGCCCGCTTGCGCGAGCCGAGCCCGGTGGCCTCTTTTCGGTCCCTGATGCCCCGAATCGCCCCGGTTCCGCCTGGTCACGTGTTCCCCAGTTTCT
ACAAATTCACTGTTGGTGTCACGTGAATGTCAGATTCGTGTTTCAGCTCCAAGGTTTTCTTGCCCGCTCTTTTGCTTCAAGTCAGTACTATTTACAAGCAATGGCGGATG
AAGAACCTGTTGATCAGAAGAGGTATCTTGAAGAAGCTTGCAAGCCCAAGTGTGTGAAATCACTACTTGAATATCAGGCGTGCGTGAAGAGAATCCAAGGGGATGACAGT
GGTCATAAGCATTGCACTGGACAATATTTTGATTACTGGTCTTGCATCGACAAATGTGTTGCACCAAAATTATTTACGAAACTAAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCCGACCATTTGGCCCGCTTGCGCGAGCCGAGCCCGGTGGCCTCTTTTCGGTCCCTGATGCCCCGAATCGCCCCGGTTCCGCCTGGTCACGTGTTCCCCAGTTTCT
ACAAATTCACTGTTGGTGTCACGTGAATGTCAGATTCGTGTTTCAGCTCCAAGGTTTTCTTGCCCGCTCTTTTGCTTCAAGTCAGTACTATTTACAAGCAATGGCGGATG
AAGAACCTGTTGATCAGAAGAGGTATCTTGAAGAAGCTTGCAAGCCCAAGTGTGTGAAATCACTACTTGAATATCAGGCGTGCGTGAAGAGAATCCAAGGGGATGACAGT
GGTCATAAGCATTGCACTGGACAATATTTTGATTACTGGTCTTGCATCGACAAATGTGTTGCACCAAAATTATTTACGAAACTAAAGTAA
Protein sequenceShow/hide protein sequence
MARPFGPLARAEPGGLFSVPDAPNRPGSAWSRVPQFLQIHCWCHVNVRFVFQLQGFLARSFASSQYYLQAMADEEPVDQKRYLEEACKPKCVKSLLEYQACVKRIQGDDS
GHKHCTGQYFDYWSCIDKCVAPKLFTKLK