; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg002807 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg002807
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionSWIM-type domain-containing protein
Genome locationscaffold6:1826451..1830114
RNA-Seq ExpressionSpg002807
SyntenySpg002807
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR006564 - Zinc finger, PMZ-type
IPR007527 - Zinc finger, SWIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK00436.1 uncharacterized protein E5676_scaffold169G00400 [Cucumis melo var. makuwa]2.8e-3929.24Show/hide
Query:  GVLVDEVMVFETFVNLILKEIKLDASISSVRFSILLNFGMNESQNVIQIHEDKDVAWFLTLVKDQSTKHPLVAHV-----DMFLGGSSSAIVGYEILSS-
        GVLVDE+M FE FV+LIL+E+  DAS SS++ SILL++G+   Q V+QI EDKDV WFL+LVK Q T+HPLVAH      DM L  SS    G + L S 
Subjt:  GVLVDEVMVFETFVNLILKEIKLDASISSVRFSILLNFGMNESQNVIQIHEDKDVAWFLTLVKDQSTKHPLVAHV-----DMFLGGSSSAIVGYEILSS-

Query:  VDSSSSNVDFQVITDVHFDG-----DLKEND---------------------------------------------------------------------
        + SSS + DFQ++TD+H        DLKE D                                                                     
Subjt:  VDSSSSNVDFQVITDVHFDG-----DLKEND---------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------------------------------------VDPISNEQSKVIDGDNYFIVNLELGSCSCRVWDLDEIPCAHALAVLRGRNLR
                                                        V+ I++ + +VIDG   FIV L+  SC+CRVWDLDEIPCAHALAVLRG    
Subjt:  ------------------------------------------------VDPISNEQSKVIDGDNYFIVNLELGSCSCRVWDLDEIPCAHALAVLRGRNLR

Query:  TYSFVSNYYFSRTLSSTYKGFVHPAGNHSEWSSIGGNMNALPPVVKRQAGRPRKQTMLSISEVRNHTKCSRCHRVGHNCRTCKFPLFIQ
                             + P GNH+ W SIG   N LPP  KR+AGRPRKQ +LSI E ++H++CS CHR GHN R CKFP F+Q
Subjt:  TYSFVSNYYFSRTLSSTYKGFVHPAGNHSEWSSIGGNMNALPPVVKRQAGRPRKQTMLSISEVRNHTKCSRCHRVGHNCRTCKFPLFIQ

TYK22454.1 uncharacterized protein E5676_scaffold3009G00020 [Cucumis melo var. makuwa]2.0e-4029.45Show/hide
Query:  GVLVDEVMVFETFVNLILKEIKLDASISSVRFSILLNFGMNESQNVIQIHEDKDVAWFLTLVKDQSTKHPLVAHV-----DMFLGGSSSAIVGYEILSS-
        GVLVDE+M FE FV+LIL+ ++ DAS SS++ SILL++G+ + Q V+QI EDKDV WFL+LVK Q T+HPLVAH      DM L  SS    G + L S 
Subjt:  GVLVDEVMVFETFVNLILKEIKLDASISSVRFSILLNFGMNESQNVIQIHEDKDVAWFLTLVKDQSTKHPLVAHV-----DMFLGGSSSAIVGYEILSS-

Query:  VDSSSSNVDFQVITDVH-----FDGDLKEND---------------------------------------------------------------------
        + SSS N DFQ++TD+H     F  DLKE D                                                                     
Subjt:  VDSSSSNVDFQVITDVH-----FDGDLKEND---------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------------------------------------VDPISNEQSKVIDGDNYFIVNLELGSCSCRVWDLDEIPCAHALAVLRGRNLR
                                                        V+ I++ + +VIDG   FIV L+  SC+CRVWDLDEIPCAHALAVLRG    
Subjt:  ------------------------------------------------VDPISNEQSKVIDGDNYFIVNLELGSCSCRVWDLDEIPCAHALAVLRGRNLR

Query:  TYSFVSNYYFSRTLSSTYKGFVHPAGNHSEWSSIGGNMNALPPVVKRQAGRPRKQTMLSISEVRNHTKCSRCHRVGHNCRTCKFPLFIQ
                             + P GNH+ W SIG   N LPP  KR+AGRPRKQ +LSI E ++H++CS CHR GHN R CKFP F+Q
Subjt:  TYSFVSNYYFSRTLSSTYKGFVHPAGNHSEWSSIGGNMNALPPVVKRQAGRPRKQTMLSISEVRNHTKCSRCHRVGHNCRTCKFPLFIQ

XP_008467000.1 PREDICTED: uncharacterized protein LOC103504407, partial [Cucumis melo]3.6e-4259.57Show/hide
Query:  VDPISNEQSKVIDGDNYFIVNLELGSCSCRVWDLDEIPCAHALAVLRGRNLRTYSFVSNYYFSRTLSSTYKGFVHPAGNHSEWSSIGGNMNALPPVVKRQ
        V+ I++ + +VI+G   FIV L+  SC+CRVWDLD+IPCAHALAVLRGR++ TYSFVS Y+ S TL STY G V P GNH+ W SIG   N LPP  KR+
Subjt:  VDPISNEQSKVIDGDNYFIVNLELGSCSCRVWDLDEIPCAHALAVLRGRNLRTYSFVSNYYFSRTLSSTYKGFVHPAGNHSEWSSIGGNMNALPPVVKRQ

Query:  AGRPRKQTMLSISEVRNHTKCSRCHRVGHNCRTCKFPLFIQ
        AG+ +KQ +LSI E ++H++CS CHR GHN R CKFP F+Q
Subjt:  AGRPRKQTMLSISEVRNHTKCSRCHRVGHNCRTCKFPLFIQ

XP_038880504.1 uncharacterized protein LOC120072166 [Benincasa hispida]3.3e-4868.61Show/hide
Query:  VDPISNEQSKVIDGDNYFIVNLELGSCSCRVWDLDEIPCAHALAVLRGRNLRTYSFVSNYYFSRTLSSTYKGFVHPAGNHSEWSSIGGNMNALPPVVKRQ
        VDPI+NE+ KVIDGDN+F+VNL   SCSCRVWDL EIPCAHA AV+ G NL  Y+FV +YYF  TL STYKG V+P GNHS+W SI   +N LPP+VKR 
Subjt:  VDPISNEQSKVIDGDNYFIVNLELGSCSCRVWDLDEIPCAHALAVLRGRNLRTYSFVSNYYFSRTLSSTYKGFVHPAGNHSEWSSIGGNMNALPPVVKRQ

Query:  AGRPRKQTMLSISEVRNHTKCSRCHRVGHNCRTCKFP
         GRPRKQ +LSI E +  +KCSRCHR GHNCRTCKFP
Subjt:  AGRPRKQTMLSISEVRNHTKCSRCHRVGHNCRTCKFP

XP_038907134.1 uncharacterized protein LOC120092945 [Benincasa hispida]9.1e-3863.11Show/hide
Query:  VDPISNEQSKVIDGDNYFIVNLELGSCSCRVWDLDEIPCAHALAVLRGRNLRTYSFVSNYYFSRTLSSTYKGFVHPAGNHSEWSSIGGNMNALPPVVKRQ
        VD I+NE+ KV+DGDN+++VN+   SCSC  WDL+EIPCAHA AVL   NL +Y+FVS+YYFS T SSTYK  +HP GNHS+WSS+  + N LPP+VKRQ
Subjt:  VDPISNEQSKVIDGDNYFIVNLELGSCSCRVWDLDEIPCAHALAVLRGRNLRTYSFVSNYYFSRTLSSTYKGFVHPAGNHSEWSSIGGNMNALPPVVKRQ

Query:  AGRPRKQTMLSISEVRNHTKCS
         GRPRKQ +LS+ E R+H KCS
Subjt:  AGRPRKQTMLSISEVRNHTKCS

XP_038907134.1 uncharacterized protein LOC120092945 [Benincasa hispida]1.0e-2862.7Show/hide
Query:  GVLVDEVMVFETFVNLILKEIKLDASISSVRFSILLNFGMNESQNVIQIHEDKDVAWFLTLVKDQSTKHPLVAHV-DMFLGGSSSAI--VGYEILSSVDS
        GVLVD++M FE FV LI+KEI+LDASISS+  S LL+FGMN+ QN+++IHEDKDVAWFLTLVK+QST+HPLVAHV  M L GSSS +       LS V  
Subjt:  GVLVDEVMVFETFVNLILKEIKLDASISSVRFSILLNFGMNESQNVIQIHEDKDVAWFLTLVKDQSTKHPLVAHV-DMFLGGSSSAI--VGYEILSSVDS

Query:  SSSNV--DFQVITDVHFDGDLKENDV
        S   +  DFQVI D+H   DLKE DV
Subjt:  SSSNV--DFQVITDVHFDGDLKENDV

TrEMBL top hitse value%identityAlignment
A0A1S3CSI6 uncharacterized protein LOC1035044071.7e-4259.57Show/hide
Query:  VDPISNEQSKVIDGDNYFIVNLELGSCSCRVWDLDEIPCAHALAVLRGRNLRTYSFVSNYYFSRTLSSTYKGFVHPAGNHSEWSSIGGNMNALPPVVKRQ
        V+ I++ + +VI+G   FIV L+  SC+CRVWDLD+IPCAHALAVLRGR++ TYSFVS Y+ S TL STY G V P GNH+ W SIG   N LPP  KR+
Subjt:  VDPISNEQSKVIDGDNYFIVNLELGSCSCRVWDLDEIPCAHALAVLRGRNLRTYSFVSNYYFSRTLSSTYKGFVHPAGNHSEWSSIGGNMNALPPVVKRQ

Query:  AGRPRKQTMLSISEVRNHTKCSRCHRVGHNCRTCKFPLFIQ
        AG+ +KQ +LSI E ++H++CS CHR GHN R CKFP F+Q
Subjt:  AGRPRKQTMLSISEVRNHTKCSRCHRVGHNCRTCKFPLFIQ

A0A5D3BD68 SWIM-type domain-containing protein4.4e-3855.88Show/hide
Query:  VDPISNEQSKVIDGDNYFIVNLELGSCSCRVWDLDEIPCAHALAVLRGRNLRTYSFVSNYYFSRTLSSTYKGFVHPAGNHSEWSSIGGNMNALPPVVKRQ
        V+P+S  + +V+DG   F+V L   SCSC  WDL+EIPCAHAL V+R  NL  Y+FVS YY++  LS+TY G V P GNH++WS +G N N LPPV +R 
Subjt:  VDPISNEQSKVIDGDNYFIVNLELGSCSCRVWDLDEIPCAHALAVLRGRNLRTYSFVSNYYFSRTLSSTYKGFVHPAGNHSEWSSIGGNMNALPPVVKRQ

Query:  AGRPRKQTMLSISEVRNHTKCSRCHRVGHNCRTCKF
        AGRPRK+ + SI EV   +KCSRC R  HN RTC+F
Subjt:  AGRPRKQTMLSISEVRNHTKCSRCHRVGHNCRTCKF

A0A5D3BD68 SWIM-type domain-containing protein4.6e-1148.54Show/hide
Query:  VLVDEVM-VFETFVNLILKEIKLDASISSVRFSILLNFGMNESQNVIQIHEDKDVAWFLTLVKDQSTKHPLVAHVDMFLGGSSSAIVGYEILSSVDSSSS
        VLVDEV+  F++FVNLI  EI+++   S +  S+LL  G N  Q+V++I E+KDV WFLTLVKDQST++PLVAH       S + ++   + SS  SS  
Subjt:  VLVDEVM-VFETFVNLILKEIKLDASISSVRFSILLNFGMNESQNVIQIHEDKDVAWFLTLVKDQSTKHPLVAHVDMFLGGSSSAIVGYEILSSVDSSSS

Query:  NVD
         VD
Subjt:  NVD

A0A5D3BD68 SWIM-type domain-containing protein4.4e-3828.63Show/hide
Query:  GVLVDEVMVFETFVNLILKEIKLDASISSVRFSILLNFGMNESQNVIQIHEDKDVAWFLTLVKDQSTKHPLVAHV-----DMFLGGSSSAIVGYEILSS-
        GVLVDE+M FE FV+LIL+ ++ DAS SS++ SILL++G+ + Q V+QI EDK+V WFL+LVK Q T+HPLVAH      +M L  SS    G + L S 
Subjt:  GVLVDEVMVFETFVNLILKEIKLDASISSVRFSILLNFGMNESQNVIQIHEDKDVAWFLTLVKDQSTKHPLVAHV-----DMFLGGSSSAIVGYEILSS-

Query:  VDSSSSNVDFQVITDVH-----FDGDLKEND---------------------------------------------------------------------
        + SSS N DFQ++TD+H     F  DLKE D                                                                     
Subjt:  VDSSSSNVDFQVITDVH-----FDGDLKEND---------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------------------------------------VDPISNEQSKVIDGDNYFIVNLELGSCSCRVWDLDEIPCAHALAVLRGRNLR
                                                        V+ I++ + +VIDG   FIV L+  SC+CRVWDLDEIPCAHAL VLRG    
Subjt:  ------------------------------------------------VDPISNEQSKVIDGDNYFIVNLELGSCSCRVWDLDEIPCAHALAVLRGRNLR

Query:  TYSFVSNYYFSRTLSSTYKGFVHPAGNHSEWSSIGGNMNALPPVVKRQAGRPRKQTMLSISEVRNHTKCSRCHRVGHNCRTCKFPLFIQ
                             + P GNH+ W SIG   N LPP  KR+AGRPRKQ +LS+ E ++H++CS CHRVGHN R CKF  F+Q
Subjt:  TYSFVSNYYFSRTLSSTYKGFVHPAGNHSEWSSIGGNMNALPPVVKRQAGRPRKQTMLSISEVRNHTKCSRCHRVGHNCRTCKFPLFIQ

A0A5D3C8T8 SWIM-type domain-containing protein1.4e-3929.24Show/hide
Query:  GVLVDEVMVFETFVNLILKEIKLDASISSVRFSILLNFGMNESQNVIQIHEDKDVAWFLTLVKDQSTKHPLVAHV-----DMFLGGSSSAIVGYEILSS-
        GVLVDE+M FE FV+LIL+E+  DAS SS++ SILL++G+   Q V+QI EDKDV WFL+LVK Q T+HPLVAH      DM L  SS    G + L S 
Subjt:  GVLVDEVMVFETFVNLILKEIKLDASISSVRFSILLNFGMNESQNVIQIHEDKDVAWFLTLVKDQSTKHPLVAHV-----DMFLGGSSSAIVGYEILSS-

Query:  VDSSSSNVDFQVITDVHFDG-----DLKEND---------------------------------------------------------------------
        + SSS + DFQ++TD+H        DLKE D                                                                     
Subjt:  VDSSSSNVDFQVITDVHFDG-----DLKEND---------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------------------------------------VDPISNEQSKVIDGDNYFIVNLELGSCSCRVWDLDEIPCAHALAVLRGRNLR
                                                        V+ I++ + +VIDG   FIV L+  SC+CRVWDLDEIPCAHALAVLRG    
Subjt:  ------------------------------------------------VDPISNEQSKVIDGDNYFIVNLELGSCSCRVWDLDEIPCAHALAVLRGRNLR

Query:  TYSFVSNYYFSRTLSSTYKGFVHPAGNHSEWSSIGGNMNALPPVVKRQAGRPRKQTMLSISEVRNHTKCSRCHRVGHNCRTCKFPLFIQ
                             + P GNH+ W SIG   N LPP  KR+AGRPRKQ +LSI E ++H++CS CHR GHN R CKFP F+Q
Subjt:  TYSFVSNYYFSRTLSSTYKGFVHPAGNHSEWSSIGGNMNALPPVVKRQAGRPRKQTMLSISEVRNHTKCSRCHRVGHNCRTCKFPLFIQ

A0A5D3DFS5 SWIM-type domain-containing protein9.4e-4129.45Show/hide
Query:  GVLVDEVMVFETFVNLILKEIKLDASISSVRFSILLNFGMNESQNVIQIHEDKDVAWFLTLVKDQSTKHPLVAHV-----DMFLGGSSSAIVGYEILSS-
        GVLVDE+M FE FV+LIL+ ++ DAS SS++ SILL++G+ + Q V+QI EDKDV WFL+LVK Q T+HPLVAH      DM L  SS    G + L S 
Subjt:  GVLVDEVMVFETFVNLILKEIKLDASISSVRFSILLNFGMNESQNVIQIHEDKDVAWFLTLVKDQSTKHPLVAHV-----DMFLGGSSSAIVGYEILSS-

Query:  VDSSSSNVDFQVITDVH-----FDGDLKEND---------------------------------------------------------------------
        + SSS N DFQ++TD+H     F  DLKE D                                                                     
Subjt:  VDSSSSNVDFQVITDVH-----FDGDLKEND---------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------------------------------------VDPISNEQSKVIDGDNYFIVNLELGSCSCRVWDLDEIPCAHALAVLRGRNLR
                                                        V+ I++ + +VIDG   FIV L+  SC+CRVWDLDEIPCAHALAVLRG    
Subjt:  ------------------------------------------------VDPISNEQSKVIDGDNYFIVNLELGSCSCRVWDLDEIPCAHALAVLRGRNLR

Query:  TYSFVSNYYFSRTLSSTYKGFVHPAGNHSEWSSIGGNMNALPPVVKRQAGRPRKQTMLSISEVRNHTKCSRCHRVGHNCRTCKFPLFIQ
                             + P GNH+ W SIG   N LPP  KR+AGRPRKQ +LSI E ++H++CS CHR GHN R CKFP F+Q
Subjt:  TYSFVSNYYFSRTLSSTYKGFVHPAGNHSEWSSIGGNMNALPPVVKRQAGRPRKQTMLSISEVRNHTKCSRCHRVGHNCRTCKFPLFIQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAAATGTCACCTCAACCTATCACTATCCTATTTGATGGTAAATGGGATGAACAAAATCACTACAAAGATTTTAAGGCCTGTCAAGTGTTAGTTCCCATGAATTCTTCCTT
ATCATTTCTTATTAACTACATCACAGACACGCTCGAATTTACAGATGGAAAAAAGGTTACCCGATTGTCTTTTTATAGAAATGGGGCAAATAAGTCTGTTATAAATAGGA
TATGCGAAGACAGAGATATCCCGTTTTCTTCTCCATCTAACAGCAAAAATCGTGGTTTTGTTGGAGTTTTAGTTGATGAAGTGATGGTGTTTGAGACCTTTGTGAATTTA
ATTTTGAAAGAAATCAAATTGGATGCATCTATTTCTTCTGTAAGATTTTCAATATTACTTAATTTTGGTATGAATGAGAGTCAAAATGTAATTCAGATTCATGAAGATAA
AGATGTAGCTTGGTTTTTGACTTTAGTGAAGGATCAAAGTACAAAACACCCTTTGGTTGCTCATGTTGATATGTTTTTGGGAGGGTCATCTAGTGCTATTGTTGGATATG
AGATTTTGTCGTCTGTTGATTCTTCCTCCAGTAATGTTGATTTTCAAGTTATTACTGATGTGCATTTTGATGGGGATTTAAAGGAGAATGATGTTGATCCTATTAGTAAT
GAACAATCCAAAGTAATTGATGGAGATAACTATTTCATTGTGAACTTGGAATTGGGATCATGTAGTTGTCGTGTTTGGGATCTTGATGAAATTCCATGTGCTCATGCACT
TGCTGTTCTTCGTGGGCGGAATTTGAGAACTTATTCTTTTGTATCAAATTATTACTTTTCAAGAACGTTGTCATCAACTTATAAAGGTTTTGTTCATCCCGCCGGTAATC
ATTCTGAATGGAGCTCTATAGGTGGAAACATGAATGCGTTGCCTCCAGTTGTTAAACGTCAGGCAGGAAGACCAAGAAAACAGACGATGCTATCAATTAGTGAAGTAAGA
AATCATACAAAATGTAGTCGTTGTCATCGTGTTGGTCACAATTGTAGGACATGTAAATTTCCACTATTCATACAATGA
mRNA sequenceShow/hide mRNA sequence
GAAATGTCACCTCAACCTATCACTATCCTATTTGATGGTAAATGGGATGAACAAAATCACTACAAAGATTTTAAGGCCTGTCAAGTGTTAGTTCCCATGAATTCTTCCTT
ATCATTTCTTATTAACTACATCACAGACACGCTCGAATTTACAGATGGAAAAAAGGTTACCCGATTGTCTTTTTATAGAAATGGGGCAAATAAGTCTGTTATAAATAGGA
TATGCGAAGACAGAGATATCCCGTTTTCTTCTCCATCTAACAGCAAAAATCGTGGTTTTGTTGGAGTTTTAGTTGATGAAGTGATGGTGTTTGAGACCTTTGTGAATTTA
ATTTTGAAAGAAATCAAATTGGATGCATCTATTTCTTCTGTAAGATTTTCAATATTACTTAATTTTGGTATGAATGAGAGTCAAAATGTAATTCAGATTCATGAAGATAA
AGATGTAGCTTGGTTTTTGACTTTAGTGAAGGATCAAAGTACAAAACACCCTTTGGTTGCTCATGTTGATATGTTTTTGGGAGGGTCATCTAGTGCTATTGTTGGATATG
AGATTTTGTCGTCTGTTGATTCTTCCTCCAGTAATGTTGATTTTCAAGTTATTACTGATGTGCATTTTGATGGGGATTTAAAGGAGAATGATGTTGATCCTATTAGTAAT
GAACAATCCAAAGTAATTGATGGAGATAACTATTTCATTGTGAACTTGGAATTGGGATCATGTAGTTGTCGTGTTTGGGATCTTGATGAAATTCCATGTGCTCATGCACT
TGCTGTTCTTCGTGGGCGGAATTTGAGAACTTATTCTTTTGTATCAAATTATTACTTTTCAAGAACGTTGTCATCAACTTATAAAGGTTTTGTTCATCCCGCCGGTAATC
ATTCTGAATGGAGCTCTATAGGTGGAAACATGAATGCGTTGCCTCCAGTTGTTAAACGTCAGGCAGGAAGACCAAGAAAACAGACGATGCTATCAATTAGTGAAGTAAGA
AATCATACAAAATGTAGTCGTTGTCATCGTGTTGGTCACAATTGTAGGACATGTAAATTTCCACTATTCATACAATGA
Protein sequenceShow/hide protein sequence
EMSPQPITILFDGKWDEQNHYKDFKACQVLVPMNSSLSFLINYITDTLEFTDGKKVTRLSFYRNGANKSVINRICEDRDIPFSSPSNSKNRGFVGVLVDEVMVFETFVNL
ILKEIKLDASISSVRFSILLNFGMNESQNVIQIHEDKDVAWFLTLVKDQSTKHPLVAHVDMFLGGSSSAIVGYEILSSVDSSSSNVDFQVITDVHFDGDLKENDVDPISN
EQSKVIDGDNYFIVNLELGSCSCRVWDLDEIPCAHALAVLRGRNLRTYSFVSNYYFSRTLSSTYKGFVHPAGNHSEWSSIGGNMNALPPVVKRQAGRPRKQTMLSISEVR
NHTKCSRCHRVGHNCRTCKFPLFIQ