; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg002810 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg002810
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionarabinogalactan peptide 22-like
Genome locationscaffold6:909148..909920
RNA-Seq ExpressionSpg002810
SyntenySpg002810
Gene Ontology termsNA
InterPro domainsIPR009424 - Arabinogalactan protein 16/20/22/41


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022140891.1 arabinogalactan peptide 22-like [Momordica charantia]1.2e-0844.19Show/hide
Query:  MAVLRACFGIYAVIIAIFCVVILPVSAAEQSSSPAPAPTSDEICWGNDRKSENGFEINIFKAASKSTLIFFLKKKKLPFLDIFLKKPWLIMVQNSKITFA
        MAV RACFGIYA IIAI  V+ILPVS AE SSSPAPAP+SD                                                           
Subjt:  MAVLRACFGIYAVIIAIFCVVILPVSAAEQSSSPAPAPTSDEICWGNDRKSENGFEINIFKAASKSTLIFFLKKKKLPFLDIFLKKPWLIMVQNSKITFA

Query:  ISYVAGTTIDQGIAYILMLLALVLTYIIH
             GTTIDQGIAYILMLLALVLTYIIH
Subjt:  ISYVAGTTIDQGIAYILMLLALVLTYIIH

XP_022945187.1 arabinogalactan peptide 22-like [Cucurbita moschata]1.1e-0944.96Show/hide
Query:  MAVLRACFGIYAVIIAIFCVVILPVSAAEQSSSPAPAPTSDEICWGNDRKSENGFEINIFKAASKSTLIFFLKKKKLPFLDIFLKKPWLIMVQNSKITFA
        MAVLRACFGIYAVIIAIF VV+LPVS AE +SSPAPAPTSD                                                           
Subjt:  MAVLRACFGIYAVIIAIFCVVILPVSAAEQSSSPAPAPTSDEICWGNDRKSENGFEINIFKAASKSTLIFFLKKKKLPFLDIFLKKPWLIMVQNSKITFA

Query:  ISYVAGTTIDQGIAYILMLLALVLTYIIH
             GT IDQGIAYILMLLAL LTYIIH
Subjt:  ISYVAGTTIDQGIAYILMLLALVLTYIIH

XP_022968216.1 arabinogalactan peptide 22-like isoform X1 [Cucurbita maxima]1.8e-0742.75Show/hide
Query:  MAVLRACFGIYAVIIAIFCVVILPVSAAEQSSS--PAPAPTSDEICWGNDRKSENGFEINIFKAASKSTLIFFLKKKKLPFLDIFLKKPWLIMVQNSKIT
        MA LRACFG+YAVIIAIF VV+LPVS AE +SS  PAPAPTSD                                                         
Subjt:  MAVLRACFGIYAVIIAIFCVVILPVSAAEQSSS--PAPAPTSDEICWGNDRKSENGFEINIFKAASKSTLIFFLKKKKLPFLDIFLKKPWLIMVQNSKIT

Query:  FAISYVAGTTIDQGIAYILMLLALVLTYIIH
               GT IDQGIAYILMLLAL LTYIIH
Subjt:  FAISYVAGTTIDQGIAYILMLLALVLTYIIH

XP_022968217.1 arabinogalactan peptide 22-like isoform X2 [Cucurbita maxima]1.8e-0742.75Show/hide
Query:  MAVLRACFGIYAVIIAIFCVVILPVSAAEQSSS--PAPAPTSDEICWGNDRKSENGFEINIFKAASKSTLIFFLKKKKLPFLDIFLKKPWLIMVQNSKIT
        MA LRACFG+YAVIIAIF VV+LPVS AE +SS  PAPAPTSD                                                         
Subjt:  MAVLRACFGIYAVIIAIFCVVILPVSAAEQSSS--PAPAPTSDEICWGNDRKSENGFEINIFKAASKSTLIFFLKKKKLPFLDIFLKKPWLIMVQNSKIT

Query:  FAISYVAGTTIDQGIAYILMLLALVLTYIIH
               GT IDQGIAYILMLLAL LTYIIH
Subjt:  FAISYVAGTTIDQGIAYILMLLALVLTYIIH

XP_038898060.1 arabinogalactan protein 41-like [Benincasa hispida]9.3e-0944.62Show/hide
Query:  MAVLRACFGIY-AVIIAIFCVVILPVSAAEQSSSPAPAPTSDEICWGNDRKSENGFEINIFKAASKSTLIFFLKKKKLPFLDIFLKKPWLIMVQNSKITF
        MAVL+ACFGIY AVIIA+F VV LPVSAAE SSSPAPAPTSD                                                          
Subjt:  MAVLRACFGIY-AVIIAIFCVVILPVSAAEQSSSPAPAPTSDEICWGNDRKSENGFEINIFKAASKSTLIFFLKKKKLPFLDIFLKKPWLIMVQNSKITF

Query:  AISYVAGTTIDQGIAYILMLLALVLTYIIH
              GTTIDQGIAY+LML+ALVLTYIIH
Subjt:  AISYVAGTTIDQGIAYILMLLALVLTYIIH

TrEMBL top hitse value%identityAlignment
A0A5D3BTZ5 Arabinogalactan peptide 223.2e-0742.75Show/hide
Query:  MAVLRA-CFGIY-AVIIAIFCVVILPVSAAEQSSSPAPAPTSDEICWGNDRKSENGFEINIFKAASKSTLIFFLKKKKLPFLDIFLKKPWLIMVQNSKIT
        MAVLRA CFGIY AV+IA+F V+ LPVS+AE SSSPAPAPTSD                                                         
Subjt:  MAVLRA-CFGIY-AVIIAIFCVVILPVSAAEQSSSPAPAPTSDEICWGNDRKSENGFEINIFKAASKSTLIFFLKKKKLPFLDIFLKKPWLIMVQNSKIT

Query:  FAISYVAGTTIDQGIAYILMLLALVLTYIIH
               GTTIDQGIAY+LML+ALVLTYIIH
Subjt:  FAISYVAGTTIDQGIAYILMLLALVLTYIIH

A0A6J1CHE0 arabinogalactan peptide 22-like5.9e-0944.19Show/hide
Query:  MAVLRACFGIYAVIIAIFCVVILPVSAAEQSSSPAPAPTSDEICWGNDRKSENGFEINIFKAASKSTLIFFLKKKKLPFLDIFLKKPWLIMVQNSKITFA
        MAV RACFGIYA IIAI  V+ILPVS AE SSSPAPAP+SD                                                           
Subjt:  MAVLRACFGIYAVIIAIFCVVILPVSAAEQSSSPAPAPTSDEICWGNDRKSENGFEINIFKAASKSTLIFFLKKKKLPFLDIFLKKPWLIMVQNSKITFA

Query:  ISYVAGTTIDQGIAYILMLLALVLTYIIH
             GTTIDQGIAYILMLLALVLTYIIH
Subjt:  ISYVAGTTIDQGIAYILMLLALVLTYIIH

A0A6J1G081 arabinogalactan peptide 22-like5.3e-1044.96Show/hide
Query:  MAVLRACFGIYAVIIAIFCVVILPVSAAEQSSSPAPAPTSDEICWGNDRKSENGFEINIFKAASKSTLIFFLKKKKLPFLDIFLKKPWLIMVQNSKITFA
        MAVLRACFGIYAVIIAIF VV+LPVS AE +SSPAPAPTSD                                                           
Subjt:  MAVLRACFGIYAVIIAIFCVVILPVSAAEQSSSPAPAPTSDEICWGNDRKSENGFEINIFKAASKSTLIFFLKKKKLPFLDIFLKKPWLIMVQNSKITFA

Query:  ISYVAGTTIDQGIAYILMLLALVLTYIIH
             GT IDQGIAYILMLLAL LTYIIH
Subjt:  ISYVAGTTIDQGIAYILMLLALVLTYIIH

A0A6J1HT15 arabinogalactan peptide 22-like isoform X28.5e-0842.75Show/hide
Query:  MAVLRACFGIYAVIIAIFCVVILPVSAAEQSSS--PAPAPTSDEICWGNDRKSENGFEINIFKAASKSTLIFFLKKKKLPFLDIFLKKPWLIMVQNSKIT
        MA LRACFG+YAVIIAIF VV+LPVS AE +SS  PAPAPTSD                                                         
Subjt:  MAVLRACFGIYAVIIAIFCVVILPVSAAEQSSS--PAPAPTSDEICWGNDRKSENGFEINIFKAASKSTLIFFLKKKKLPFLDIFLKKPWLIMVQNSKIT

Query:  FAISYVAGTTIDQGIAYILMLLALVLTYIIH
               GT IDQGIAYILMLLAL LTYIIH
Subjt:  FAISYVAGTTIDQGIAYILMLLALVLTYIIH

A0A6J1HU96 arabinogalactan peptide 22-like isoform X18.5e-0842.75Show/hide
Query:  MAVLRACFGIYAVIIAIFCVVILPVSAAEQSSS--PAPAPTSDEICWGNDRKSENGFEINIFKAASKSTLIFFLKKKKLPFLDIFLKKPWLIMVQNSKIT
        MA LRACFG+YAVIIAIF VV+LPVS AE +SS  PAPAPTSD                                                         
Subjt:  MAVLRACFGIYAVIIAIFCVVILPVSAAEQSSS--PAPAPTSDEICWGNDRKSENGFEINIFKAASKSTLIFFLKKKKLPFLDIFLKKPWLIMVQNSKIT

Query:  FAISYVAGTTIDQGIAYILMLLALVLTYIIH
               GT IDQGIAYILMLLAL LTYIIH
Subjt:  FAISYVAGTTIDQGIAYILMLLALVLTYIIH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGTTTTGAGGGCTTGTTTTGGAATCTATGCTGTGATTATTGCTATCTTTTGTGTTGTGATTTTGCCTGTATCTGCAGCTGAACAATCCTCTTCTCCAGCTCCGGC
TCCCACTAGTGATGAAATTTGCTGGGGCAATGACAGGAAATCTGAGAATGGTTTTGAAATCAACATTTTCAAAGCAGCATCAAAATCTACTCTCATTTTCTTCCTCAAGA
AGAAGAAGCTACCATTTTTAGACATTTTCTTAAAGAAACCTTGGCTTATAATGGTGCAGAACTCCAAAATAACATTTGCCATTTCATATGTTGCAGGAACCACAATAGAC
CAAGGCATAGCATACATTCTAATGCTGCTGGCTTTAGTGCTCACTTATATCATCCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGTTTTGAGGGCTTGTTTTGGAATCTATGCTGTGATTATTGCTATCTTTTGTGTTGTGATTTTGCCTGTATCTGCAGCTGAACAATCCTCTTCTCCAGCTCCGGC
TCCCACTAGTGATGAAATTTGCTGGGGCAATGACAGGAAATCTGAGAATGGTTTTGAAATCAACATTTTCAAAGCAGCATCAAAATCTACTCTCATTTTCTTCCTCAAGA
AGAAGAAGCTACCATTTTTAGACATTTTCTTAAAGAAACCTTGGCTTATAATGGTGCAGAACTCCAAAATAACATTTGCCATTTCATATGTTGCAGGAACCACAATAGAC
CAAGGCATAGCATACATTCTAATGCTGCTGGCTTTAGTGCTCACTTATATCATCCATTGA
Protein sequenceShow/hide protein sequence
MAVLRACFGIYAVIIAIFCVVILPVSAAEQSSSPAPAPTSDEICWGNDRKSENGFEINIFKAASKSTLIFFLKKKKLPFLDIFLKKPWLIMVQNSKITFAISYVAGTTID
QGIAYILMLLALVLTYIIH