; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg002812 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg002812
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDNA-repair protein, UmuC-like protein
Genome locationscaffold6:4215535..4217715
RNA-Seq ExpressionSpg002812
SyntenySpg002812
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014938.1 hypothetical protein SDJN02_22569, partial [Cucurbita argyrosperma subsp. argyrosperma]5.4e-9582.1Show/hide
Query:  MDFTVTIPRIPQNFPSIHRTLTKIHSSSSSSSSSKSPNSQSPLPSQS------LIAPSGGNIPTMSEILAAGEAQNLGLRLQTLGPFFRITAKSLESQRE
        M+ TV IP IPQNF  IHR LTK H   +SSSSSKSPN Q PLPS+S      LI P G   PTM+EILAAGEAQN+ LRLQTLGPFFRITAKSLESQRE
Subjt:  MDFTVTIPRIPQNFPSIHRTLTKIHSSSSSSSSSKSPNSQSPLPSQS------LIAPSGGNIPTMSEILAAGEAQNLGLRLQTLGPFFRITAKSLESQRE

Query:  IGRAEGLIRVWLRGKILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGFDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKMRDIGDML
        IG+AEGLIRVWLRG+ILHLDSIRL RESLGMEKSIFGLGLFIGAVAIRYG+DCGCKTAELLAINDSDLYHSKLVRFYTRIGFK++YEVSGSK+ DIGDML
Subjt:  IGRAEGLIRVWLRGKILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGFDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKMRDIGDML

Query:  VWGGVGTRMDANIEGLLLKWCTRFKSPSS
        VWGGVGTRMDA IE LLLKWC+RFKS SS
Subjt:  VWGGVGTRMDANIEGLLLKWCTRFKSPSS

XP_008454398.1 PREDICTED: uncharacterized protein LOC103494815 [Cucumis melo]6.1e-9982.89Show/hide
Query:  FTVTIPRIPQNFPSIHRTLTKIHSSSSSSSSSKSPNSQSPLPSQSLIAPSG---GNIPTMSEILAAGEAQNLGLRLQTLGPFFRITAKSLESQREIGRAE
        FT+TIPRIP     IHRTLTKIH    +SSSSK PNSQ PLPS+SLI   G    NIPTM+EI+AAGE+QNL LRLQTLGPFFRITAKSLE++REIG+AE
Subjt:  FTVTIPRIPQNFPSIHRTLTKIHSSSSSSSSSKSPNSQSPLPSQSLIAPSG---GNIPTMSEILAAGEAQNLGLRLQTLGPFFRITAKSLESQREIGRAE

Query:  GLIRVWLRGKILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGFDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKMRDIGDMLVWGGV
        GL+RVWL GKILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYG+DCGCKTAELLAINDSDLYHSKLVRFYTRIGFK+MYEVSGSK++DIGDM+VWGG+
Subjt:  GLIRVWLRGKILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGFDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKMRDIGDMLVWGGV

Query:  GTRMDANIEGLLLKWCTRFKSPSSNTQN
        GTRMDA IE LLLKWCTRFKSPSS+TQN
Subjt:  GTRMDANIEGLLLKWCTRFKSPSSNTQN

XP_022922749.1 uncharacterized protein LOC111430648 [Cucurbita moschata]8.3e-9682.53Show/hide
Query:  MDFTVTIPRIPQNFPSIHRTLTKIHSSSSSSSSSKSPNSQSPLPSQS------LIAPSGGNIPTMSEILAAGEAQNLGLRLQTLGPFFRITAKSLESQRE
        M+ TV IPRIPQNF  IHR LTK H   +SSSSSKSPN Q PLPS+S      LIAP G   PTM+EI+AAGEAQN+ LRLQTLGPFFRITAKSLESQRE
Subjt:  MDFTVTIPRIPQNFPSIHRTLTKIHSSSSSSSSSKSPNSQSPLPSQS------LIAPSGGNIPTMSEILAAGEAQNLGLRLQTLGPFFRITAKSLESQRE

Query:  IGRAEGLIRVWLRGKILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGFDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKMRDIGDML
        IG+AEGLIRVWLRG+ILHLDSIRL RESLGMEKSIFGLGLFIGAVAIRYG+DCGCKTAELLAINDSDLYHSKLVRFYTRIGFK++YEVSGSK+ DIGDML
Subjt:  IGRAEGLIRVWLRGKILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGFDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKMRDIGDML

Query:  VWGGVGTRMDANIEGLLLKWCTRFKSPSS
        VWGGVGTRMDA IE LLLKWC+RFKS SS
Subjt:  VWGGVGTRMDANIEGLLLKWCTRFKSPSS

XP_023521663.1 uncharacterized protein LOC111785501 [Cucurbita pepo subsp. pepo]3.7e-9682.53Show/hide
Query:  MDFTVTIPRIPQNFPSIHRTLTKIHSSSSSSSSSKSPNSQSPLPSQS------LIAPSGGNIPTMSEILAAGEAQNLGLRLQTLGPFFRITAKSLESQRE
        M+ TV IPRIPQNF  IHR LTK H   +SSSSSKSPN Q PLPS+S      LIAP G   PTM+EILAAGEAQN+ LRLQTLGPFFRITAKSLESQRE
Subjt:  MDFTVTIPRIPQNFPSIHRTLTKIHSSSSSSSSSKSPNSQSPLPSQS------LIAPSGGNIPTMSEILAAGEAQNLGLRLQTLGPFFRITAKSLESQRE

Query:  IGRAEGLIRVWLRGKILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGFDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKMRDIGDML
        IG+AEGLIRVWLRG+ILHLDSIRL RESLGMEKSIFGLGLFIGAVAIRYG+DCGC+TAELLAINDSDLYHSKLVRFYTRIGFK++YEVSGSK+ DIGDML
Subjt:  IGRAEGLIRVWLRGKILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGFDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKMRDIGDML

Query:  VWGGVGTRMDANIEGLLLKWCTRFKSPSS
        VWGGVGTRMDA IE LLLKWC+RFKS SS
Subjt:  VWGGVGTRMDANIEGLLLKWCTRFKSPSS

XP_038903453.1 uncharacterized protein LOC120090038 [Benincasa hispida]7.0e-10383.05Show/hide
Query:  MDFTVTIPRIPQNFPSIHRTLT-KIHSSSSSSSSSKSPNSQSPLPSQSLIAPSGGNIPTMSEILAAGEAQNLGLRLQTLGPFFRITAKSLESQREIGRAE
        M+FT+ IPRIPQNF  IHRTL  KIH      +SSK PNSQ PLPS+SLI P+  NIPTMSEILAAG+AQNLGLRLQTLGPFFRITAKSLESQREIG+AE
Subjt:  MDFTVTIPRIPQNFPSIHRTLT-KIHSSSSSSSSSKSPNSQSPLPSQSLIAPSGGNIPTMSEILAAGEAQNLGLRLQTLGPFFRITAKSLESQREIGRAE

Query:  GLIRVWLRGKILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGFDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKMRDIGDMLVWGGV
        GL+RVWLRGKILHL+SIRLNRESLGMEKSIFGLGLFIGAVAIRYG+DCGCKTAELLAINDSDLYHSKLVRFYTRIGFK+MYEVSG+K+ DIGDMLVWGG+
Subjt:  GLIRVWLRGKILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGFDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKMRDIGDMLVWGGV

Query:  GTRMDANIEGLLLKWCTRFKSPSSNTQNSPSLVQSN
        GTRMDA+I+ LLLKWCTRFK PSSN QNS  L+Q+N
Subjt:  GTRMDANIEGLLLKWCTRFKSPSSNTQNSPSLVQSN

TrEMBL top hitse value%identityAlignment
A0A0A0KT41 Uncharacterized protein4.2e-9382.49Show/hide
Query:  FTVTIPRIPQNFPSIHRTLTKIHSSSSSSSSSKSPNSQSPLPSQSLIAPSGGNIPTMSEILAAGEAQNLGLRLQTLGPFFRITAKSLESQREIGRAEGLI
        FT+TIPRIP     IHRTLTKIH    +SSSSKSPNSQ PLPS+     +  NIPTM+EI+AAGEAQNL LRLQTLGPFFRITAKSL ++REIG+AEGL+
Subjt:  FTVTIPRIPQNFPSIHRTLTKIHSSSSSSSSSKSPNSQSPLPSQSLIAPSGGNIPTMSEILAAGEAQNLGLRLQTLGPFFRITAKSLESQREIGRAEGLI

Query:  RVWLRGKILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGFDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKMRDIGDMLVWGGVGTR
        RVWL GKILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYG+DCGCKTAELLAINDSDLYHSKLVRFYTRIGFK+MYEVSGSK++DIGDMLVWGG+GTR
Subjt:  RVWLRGKILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGFDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKMRDIGDMLVWGGVGTR

Query:  MDANIEGLLLKWCTRFK
        MDA I+ LLLKWCTRFK
Subjt:  MDANIEGLLLKWCTRFK

A0A1S3BZR1 uncharacterized protein LOC1034948153.0e-9982.89Show/hide
Query:  FTVTIPRIPQNFPSIHRTLTKIHSSSSSSSSSKSPNSQSPLPSQSLIAPSG---GNIPTMSEILAAGEAQNLGLRLQTLGPFFRITAKSLESQREIGRAE
        FT+TIPRIP     IHRTLTKIH    +SSSSK PNSQ PLPS+SLI   G    NIPTM+EI+AAGE+QNL LRLQTLGPFFRITAKSLE++REIG+AE
Subjt:  FTVTIPRIPQNFPSIHRTLTKIHSSSSSSSSSKSPNSQSPLPSQSLIAPSG---GNIPTMSEILAAGEAQNLGLRLQTLGPFFRITAKSLESQREIGRAE

Query:  GLIRVWLRGKILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGFDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKMRDIGDMLVWGGV
        GL+RVWL GKILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYG+DCGCKTAELLAINDSDLYHSKLVRFYTRIGFK+MYEVSGSK++DIGDM+VWGG+
Subjt:  GLIRVWLRGKILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGFDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKMRDIGDMLVWGGV

Query:  GTRMDANIEGLLLKWCTRFKSPSSNTQN
        GTRMDA IE LLLKWCTRFKSPSS+TQN
Subjt:  GTRMDANIEGLLLKWCTRFKSPSSNTQN

A0A6J1D616 uncharacterized protein LOC1110176372.4e-9383.41Show/hide
Query:  MDFTVTIPRIPQNFPSIHRTLTKIHSSSSSSSSSKSPNSQSPLPSQS--LIAPSGGNIPTMSEILAAGEAQNLGLRLQTLGPFFRITAKSLESQREIGRA
        M+FT TI RIPQNF  I R L+KIH  +SSSSSSK PNSQ P PS+S   +     NIPTM EILAAG AQNL LRLQTLGPFFRITAKS ESQREIG+A
Subjt:  MDFTVTIPRIPQNFPSIHRTLTKIHSSSSSSSSSKSPNSQSPLPSQS--LIAPSGGNIPTMSEILAAGEAQNLGLRLQTLGPFFRITAKSLESQREIGRA

Query:  EGLIRVWLRGKILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGFDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKMRDIGDMLVWGG
        EGLIRVW  G+ILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGFDCGCKTAELLAINDSDLYHSKLVRFYTRIGFK+MYEVSGSKM D GDMLVWGG
Subjt:  EGLIRVWLRGKILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGFDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKMRDIGDMLVWGG

Query:  VGTRMDANIEGLLLKWCTRFKSP
        VGTRMDA+IE LLLKWCTRFKSP
Subjt:  VGTRMDANIEGLLLKWCTRFKSP

A0A6J1E4B2 uncharacterized protein LOC1114306484.0e-9682.53Show/hide
Query:  MDFTVTIPRIPQNFPSIHRTLTKIHSSSSSSSSSKSPNSQSPLPSQS------LIAPSGGNIPTMSEILAAGEAQNLGLRLQTLGPFFRITAKSLESQRE
        M+ TV IPRIPQNF  IHR LTK H   +SSSSSKSPN Q PLPS+S      LIAP G   PTM+EI+AAGEAQN+ LRLQTLGPFFRITAKSLESQRE
Subjt:  MDFTVTIPRIPQNFPSIHRTLTKIHSSSSSSSSSKSPNSQSPLPSQS------LIAPSGGNIPTMSEILAAGEAQNLGLRLQTLGPFFRITAKSLESQRE

Query:  IGRAEGLIRVWLRGKILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGFDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKMRDIGDML
        IG+AEGLIRVWLRG+ILHLDSIRL RESLGMEKSIFGLGLFIGAVAIRYG+DCGCKTAELLAINDSDLYHSKLVRFYTRIGFK++YEVSGSK+ DIGDML
Subjt:  IGRAEGLIRVWLRGKILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGFDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKMRDIGDML

Query:  VWGGVGTRMDANIEGLLLKWCTRFKSPSS
        VWGGVGTRMDA IE LLLKWC+RFKS SS
Subjt:  VWGGVGTRMDANIEGLLLKWCTRFKSPSS

A0A6J1JB84 uncharacterized protein LOC1114828884.4e-9581.66Show/hide
Query:  MDFTVTIPRIPQNFPSIHRTLTKIHSSSSSSSSSKSPNSQSPLPS------QSLIAPSGGNIPTMSEILAAGEAQNLGLRLQTLGPFFRITAKSLESQRE
        M+ TV IPRIPQNF  IHR LTK H   SSSSSSKSPN Q PLPS      ++LIAP G   PTM+EILAAGEAQN+ LRLQTLGPFFRITAKSLESQRE
Subjt:  MDFTVTIPRIPQNFPSIHRTLTKIHSSSSSSSSSKSPNSQSPLPS------QSLIAPSGGNIPTMSEILAAGEAQNLGLRLQTLGPFFRITAKSLESQRE

Query:  IGRAEGLIRVWLRGKILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGFDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKMRDIGDML
        IG+AEGLIRVWLRG+ILHLDSIRL RESLGMEKSIFGLGLFIGAVAIRYG+DCGCKTAELLAINDSDLYHSKLVRFYTRIGF+++YEVSGS + DIGDML
Subjt:  IGRAEGLIRVWLRGKILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGFDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKMRDIGDML

Query:  VWGGVGTRMDANIEGLLLKWCTRFKSPSS
        VWGGVGTRMDA IE LL KWC+RFKS SS
Subjt:  VWGGVGTRMDANIEGLLLKWCTRFKSPSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTTCACAGTCACAATTCCCCGAATCCCCCAGAATTTCCCCTCAATTCACAGAACCCTAACTAAAATCCACTCCTCTTCCTCTTCCTCATCCTCATCCAAAAGCCC
TAATTCCCAATCACCACTCCCATCACAATCCCTAATCGCTCCAAGCGGCGGAAACATTCCGACGATGTCGGAAATTCTGGCGGCCGGCGAGGCTCAGAATCTGGGCCTCC
GGCTGCAGACTTTGGGGCCGTTTTTCAGAATTACGGCGAAAAGCTTGGAATCGCAGCGAGAGATCGGGAGGGCGGAGGGATTGATAAGAGTGTGGTTGCGAGGGAAGATT
CTTCATCTGGATTCGATTCGATTGAACAGAGAGAGCTTGGGAATGGAGAAATCGATCTTTGGACTCGGATTGTTCATCGGCGCTGTTGCGATTCGGTATGGGTTTGATTG
TGGCTGCAAGACGGCGGAGTTGTTGGCCATCAATGACTCCGATCTTTACCATTCTAAGCTTGTTAGATTCTACACAAGGATTGGGTTCAAGACAATGTATGAAGTGAGTG
GTTCAAAGATGAGAGACATTGGGGACATGTTGGTGTGGGGAGGGGTTGGGACTAGAATGGATGCAAACATTGAAGGCCTTCTCCTCAAATGGTGCACTAGGTTCAAATCC
CCATCGTCTAACACACAAAACTCCCCCTCTTTGGTTCAAAGTAACTCACAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGACTTCACAGTCACAATTCCCCGAATCCCCCAGAATTTCCCCTCAATTCACAGAACCCTAACTAAAATCCACTCCTCTTCCTCTTCCTCATCCTCATCCAAAAGCCC
TAATTCCCAATCACCACTCCCATCACAATCCCTAATCGCTCCAAGCGGCGGAAACATTCCGACGATGTCGGAAATTCTGGCGGCCGGCGAGGCTCAGAATCTGGGCCTCC
GGCTGCAGACTTTGGGGCCGTTTTTCAGAATTACGGCGAAAAGCTTGGAATCGCAGCGAGAGATCGGGAGGGCGGAGGGATTGATAAGAGTGTGGTTGCGAGGGAAGATT
CTTCATCTGGATTCGATTCGATTGAACAGAGAGAGCTTGGGAATGGAGAAATCGATCTTTGGACTCGGATTGTTCATCGGCGCTGTTGCGATTCGGTATGGGTTTGATTG
TGGCTGCAAGACGGCGGAGTTGTTGGCCATCAATGACTCCGATCTTTACCATTCTAAGCTTGTTAGATTCTACACAAGGATTGGGTTCAAGACAATGTATGAAGTGAGTG
GTTCAAAGATGAGAGACATTGGGGACATGTTGGTGTGGGGAGGGGTTGGGACTAGAATGGATGCAAACATTGAAGGCCTTCTCCTCAAATGGTGCACTAGGTTCAAATCC
CCATCGTCTAACACACAAAACTCCCCCTCTTTGGTTCAAAGTAACTCACAATAG
Protein sequenceShow/hide protein sequence
MDFTVTIPRIPQNFPSIHRTLTKIHSSSSSSSSSKSPNSQSPLPSQSLIAPSGGNIPTMSEILAAGEAQNLGLRLQTLGPFFRITAKSLESQREIGRAEGLIRVWLRGKI
LHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGFDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKMRDIGDMLVWGGVGTRMDANIEGLLLKWCTRFKS
PSSNTQNSPSLVQSNSQ