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Spg002815 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg002815
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionEKC/KEOPS complex, subunit Pcc1
Genome locationscaffold6:564403..565867
RNA-Seq ExpressionSpg002815
SyntenySpg002815
Gene Ontology termsGO:0070525 - tRNA threonylcarbamoyladenosine metabolic process (biological process)
GO:0000408 - EKC/KEOPS complex (cellular component)
InterPro domainsIPR015419 - CTAG/Pcc1 family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576647.1 hypothetical protein SDJN03_24221, partial [Cucurbita argyrosperma subsp. sororia]2.2e-4292.93Show/hide
Query:  MAPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRASYSAFVDVLTLATKTIEDFGQGVDF
        MAPT SVASDGE KWEFSCD EVDYESEKKASIVY ALVVDKELQPDKVKREMTVSDGKLS+H EAVEARFLRAS+SAFVDVLTLATKTIEDFGQGVDF
Subjt:  MAPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRASYSAFVDVLTLATKTIEDFGQGVDF

XP_022141079.1 uncharacterized protein LOC111011564 [Momordica charantia]4.4e-4394.9Show/hide
Query:  MAPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRASYSAFVDVLTLATKTIEDFGQGVD
        MAPTASVASDGEAKWEF CDFEVDYESEKKASIVYNAL VDKELQPDKVKREM VSDGKLSVHFEAVEARFLRAS+SAFVDVLTLATKTIEDFGQG+D
Subjt:  MAPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRASYSAFVDVLTLATKTIEDFGQGVD

XP_022945934.1 uncharacterized protein LOC111450028 [Cucurbita moschata]5.8e-4393.94Show/hide
Query:  MAPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRASYSAFVDVLTLATKTIEDFGQGVDF
        MAPTASV SDG+AKWEFSCDFEVD ESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRASYSAF+DVLTLA KTIEDFGQG+DF
Subjt:  MAPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRASYSAFVDVLTLATKTIEDFGQGVDF

XP_023553191.1 uncharacterized protein LOC111810678 [Cucurbita pepo subsp. pepo]1.3e-4292.93Show/hide
Query:  MAPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRASYSAFVDVLTLATKTIEDFGQGVDF
        M PT SVASDGE  WEFSCDFEVDYESEKKASIVY ALVVDKELQPDKVKREMTVSDGKLS+HFEAVEARFLRAS+SAFVDVLTLATKTIEDFGQGVDF
Subjt:  MAPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRASYSAFVDVLTLATKTIEDFGQGVDF

XP_038895564.1 uncharacterized protein LOC120083771 [Benincasa hispida]3.4e-4392.93Show/hide
Query:  MAPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRASYSAFVDVLTLATKTIEDFGQGVDF
        MAPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNAL+VDKELQPDKVKR M+VSDGKLS+HFEAVEARFLRAS+SAFVDVLTLATKT+EDFGQ VDF
Subjt:  MAPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRASYSAFVDVLTLATKTIEDFGQGVDF

TrEMBL top hitse value%identityAlignment
A0A1S3CTG0 uncharacterized protein LOC1035041465.9e-4187.88Show/hide
Query:  MAPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRASYSAFVDVLTLATKTIEDFGQGVDF
        M PTASVASDGEAKWEFSCDFEVDYESEKKASIVYNAL+VDKELQPDKVKR M++S+GKLS+HFEAVEARFLRAS+S+FVDVLTLATKTIEDFG  V+F
Subjt:  MAPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRASYSAFVDVLTLATKTIEDFGQGVDF

A0A5D3CJ23 EKC/KEOPS complex, subunit Pcc15.9e-4187.88Show/hide
Query:  MAPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRASYSAFVDVLTLATKTIEDFGQGVDF
        M PTASVASDGEAKWEFSCDFEVDYESEKKASIVYNAL+VDKELQPDKVKR M++S+GKLS+HFEAVEARFLRAS+S+FVDVLTLATKTIEDFG  V+F
Subjt:  MAPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRASYSAFVDVLTLATKTIEDFGQGVDF

A0A6J1CHJ5 uncharacterized protein LOC1110115642.2e-4394.9Show/hide
Query:  MAPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRASYSAFVDVLTLATKTIEDFGQGVD
        MAPTASVASDGEAKWEF CDFEVDYESEKKASIVYNAL VDKELQPDKVKREM VSDGKLSVHFEAVEARFLRAS+SAFVDVLTLATKTIEDFGQG+D
Subjt:  MAPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRASYSAFVDVLTLATKTIEDFGQGVD

A0A6J1G2C3 uncharacterized protein LOC1114500282.8e-4393.94Show/hide
Query:  MAPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRASYSAFVDVLTLATKTIEDFGQGVDF
        MAPTASV SDG+AKWEFSCDFEVD ESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRASYSAF+DVLTLA KTIEDFGQG+DF
Subjt:  MAPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRASYSAFVDVLTLATKTIEDFGQGVDF

A0A6J1HX84 uncharacterized protein LOC111467483 isoform X22.0e-4191.92Show/hide
Query:  MAPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRASYSAFVDVLTLATKTIEDFGQGVDF
        MAPTASV SDG+AKWEFSCDFEVD ESEKKASIVYNALVVDKELQPDKVKR MTVSDGKLSVHFEAVEARFLRAS SAF+DVLTLA KTIEDFGQG+DF
Subjt:  MAPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRASYSAFVDVLTLATKTIEDFGQGVDF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G53045.1 unknown protein6.6e-2963.16Show/hide
Query:  MAPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRASYSAFVDVLTLATKTIEDFGQ
        MA T    +  +  W+FSC+ +V +ESE+ A I Y +L VDKELQPDKV+R M+VS+ KLSVHFEA+EAR LRAS+SAFVDVLTLAT+TI++FGQ
Subjt:  MAPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRASYSAFVDVLTLATKTIEDFGQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCGACAGCTTCCGTCGCTTCTGATGGAGAGGCCAAATGGGAATTCAGCTGTGACTTTGAAGTCGATTATGAGTCTGAGAAGAAAGCTTCAATTGTCTATAATGC
TTTAGTCGTCGATAAAGAGTTGCAGCCAGACAAGGTTAAAAGGGAGATGACAGTTTCTGATGGAAAACTTTCAGTACACTTTGAGGCAGTGGAAGCAAGATTTCTGCGTG
CATCATACAGTGCTTTTGTGGATGTGCTTACTCTTGCCACAAAAACAATCGAAGATTTTGGACAAGGAGTGGATTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCGACAGCTTCCGTCGCTTCTGATGGAGAGGCCAAATGGGAATTCAGCTGTGACTTTGAAGTCGATTATGAGTCTGAGAAGAAAGCTTCAATTGTCTATAATGC
TTTAGTCGTCGATAAAGAGTTGCAGCCAGACAAGGTTAAAAGGGAGATGACAGTTTCTGATGGAAAACTTTCAGTACACTTTGAGGCAGTGGAAGCAAGATTTCTGCGTG
CATCATACAGTGCTTTTGTGGATGTGCTTACTCTTGCCACAAAAACAATCGAAGATTTTGGACAAGGAGTGGATTTCTGA
Protein sequenceShow/hide protein sequence
MAPTASVASDGEAKWEFSCDFEVDYESEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRASYSAFVDVLTLATKTIEDFGQGVDF