; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg002843 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg002843
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionS4 RNA-binding domain-containing protein
Genome locationscaffold6:5762794..5768926
RNA-Seq ExpressionSpg002843
SyntenySpg002843
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR002942 - RNA-binding S4 domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR017506 - Photosystem II S4
IPR036986 - RNA-binding S4 domain superfamily
IPR040591 - YlmH, putative RNA-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600381.1 hypothetical protein SDJN03_05614, partial [Cucurbita argyrosperma subsp. sororia]9.6e-15689.44Show/hide
Query:  LTMAATSIGTLWCLRRAAQASTFCSPFAANLNKLSFHEARFPSASSSPLGSSGTCQLLQAVKGDIDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHT
        +  A  SIG LW LRRAAQ+S+F +P A NL K+SFHEARFPS+ SSPLG+SG CQL+QAVKGDIDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHT
Subjt:  LTMAATSIGTLWCLRRAAQASTFCSPFAANLNKLSFHEARFPSASSSPLGSSGTCQLLQAVKGDIDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHT

Query:  NFLTPPVVKESMLALQKLADVKAIAQGGYPEAERCRISVGHADELTSDPDVISALSITGNFTFHPCSHGDFLGSILGTGIAREKLGDIILQEDRGAQVVI
        NFLTPPVVKESMLA+QKLADVKAIAQGGYPEAERCRISVGHADELTSDPDV+SALSITGNF FH C+HGDFLG+ILGTGIAREKLGDIILQE++GAQVVI
Subjt:  NFLTPPVVKESMLALQKLADVKAIAQGGYPEAERCRISVGHADELTSDPDVISALSITGNFTFHPCSHGDFLGSILGTGIAREKLGDIILQEDRGAQVVI

Query:  VPELVDFLVSSLRKVGNVTVSCTRIPLTALDYEPPKTKTFKTIEASLRVDALASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGR
        VPELVDFLVSSLRKVGNVTVSCTRIPLT LDYEPPKTKTFKTIEASLRVDALASAGFKISRSKLVD IS GDVRVNWT ITKNGTILKTGDIVSVSGKGR
Subjt:  VPELVDFLVSSLRKVGNVTVSCTRIPLTALDYEPPKTKTFKTIEASLRVDALASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGR

Query:  LKIGEINSTKKGKFAIELIRYV
        LKIGEIN TKKGKFAIELI+YV
Subjt:  LKIGEINSTKKGKFAIELIRYV

XP_004146247.1 uncharacterized protein LOC101221944 [Cucumis sativus]1.1e-15489.75Show/hide
Query:  LTMAATSIGTLWCLRRAAQASTFCSPFAANLNKLSFHEARFPSASSSPLGSSGTCQLLQAVKGDIDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHT
        +   ATSI  LW LRRAAQ S+F  P A NLN+L F+EARFP   SSPLG+SG CQL+QAVKGDIDVLLNGVGDKGVIVDVK ILVMAKRSLSRREVLHT
Subjt:  LTMAATSIGTLWCLRRAAQASTFCSPFAANLNKLSFHEARFPSASSSPLGSSGTCQLLQAVKGDIDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHT

Query:  NFLTPPVVKESMLALQKLADVKAIAQGGYPEAERCRISVGHADELTSDPDVISALSITGNFTFHPCSHGDFLGSILGTGIAREKLGDIILQEDRGAQVVI
        NFLTPPVVKESMLA+QKLADVKAIAQGGYPEAERCRISVGHADELTSDPD+ISALSITGNFTFHPCSHGDFLGSILGTGIAREKLGDI+LQE+ GAQVVI
Subjt:  NFLTPPVVKESMLALQKLADVKAIAQGGYPEAERCRISVGHADELTSDPDVISALSITGNFTFHPCSHGDFLGSILGTGIAREKLGDIILQEDRGAQVVI

Query:  VPELVDFLVSSLRKVGNVTVSCTRIPLTALDYEPPKTKTFKTIEASLRVDALASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGR
        VPELVDFL+SSLRKVGNVTVSCTRIPLTAL+YEPPKTKTFKTIEASLRVDA+ASAGFKISRSKLVDLISSGDVRVNWT ITKNGTILKTGDIVSVSGKGR
Subjt:  VPELVDFLVSSLRKVGNVTVSCTRIPLTALDYEPPKTKTFKTIEASLRVDALASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGR

Query:  LKIGEINSTKKGKFAIELIRYV
        LKIGEINSTKKGKFA+ELIRYV
Subjt:  LKIGEINSTKKGKFAIELIRYV

XP_022142743.1 uncharacterized protein LOC111012786 isoform X1 [Momordica charantia]9.6e-15690.31Show/hide
Query:  MAATSIGTLWCLRRAAQASTFCSPFAANLNKLSFHEARFPSASSSPLGSSGTCQLLQAVKGDIDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNF
        MAATSIG LW LRRAAQAS+F  P A N   LSFH+ARFP + SSP GSSG CQL+QAVKGDIDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNF
Subjt:  MAATSIGTLWCLRRAAQASTFCSPFAANLNKLSFHEARFPSASSSPLGSSGTCQLLQAVKGDIDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNF

Query:  LTPPVVKESMLALQKLADVKAIAQGGYPEAERCRISVGHADELTSDPDVISALSITGNFTFHPCSHGDFLGSILGTGIAREKLGDIILQEDRGAQVVIVP
        LTPPVVKESMLA+QKLADVKAIAQGGYPEAERCRISVGHADELTSDPD+ISALSITGNFTFHPCSHGDFLGSILGTGIAREKLGDIILQ + GAQVV+VP
Subjt:  LTPPVVKESMLALQKLADVKAIAQGGYPEAERCRISVGHADELTSDPDVISALSITGNFTFHPCSHGDFLGSILGTGIAREKLGDIILQEDRGAQVVIVP

Query:  ELVDFLVSSLRKVGNVTVSCTRIPLTALDYEPPKTKTFKTIEASLRVDALASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGRLK
        ELVDFL+SSLRKVGNVTVSCTRIPLTALDYEPPKTKTF TIEASLRVDA+ASAGFKISRSKLVDLISSGDVRVNWTP+TKNGT LKTGD+VSVSGKGRLK
Subjt:  ELVDFLVSSLRKVGNVTVSCTRIPLTALDYEPPKTKTFKTIEASLRVDALASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGRLK

Query:  IGEINSTKKGKFAIELIRYV
        IGEINSTKKGKF++ELIRYV
Subjt:  IGEINSTKKGKFAIELIRYV

XP_022981895.1 uncharacterized protein LOC111480897 isoform X1 [Cucurbita maxima]8.1e-15588.82Show/hide
Query:  LTMAATSIGTLWCLRRAAQASTFCSPFAANLNKLSFHEARFPSASSSPLGSSGTCQLLQAVKGDIDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHT
        +  A  SIG LW LRRAAQ+S+  +P A NL+K+SFHEARFP++ SSPLGSSG CQL+QAVKGDIDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHT
Subjt:  LTMAATSIGTLWCLRRAAQASTFCSPFAANLNKLSFHEARFPSASSSPLGSSGTCQLLQAVKGDIDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHT

Query:  NFLTPPVVKESMLALQKLADVKAIAQGGYPEAERCRISVGHADELTSDPDVISALSITGNFTFHPCSHGDFLGSILGTGIAREKLGDIILQEDRGAQVVI
        NFLTPPVVKESMLA++KLADVKAIAQGGYPEAERCRISVGHADELTSDPDV+SALSITGNF FH C+HGDFLG+ILGTGIAREKLGDIILQE++GAQVVI
Subjt:  NFLTPPVVKESMLALQKLADVKAIAQGGYPEAERCRISVGHADELTSDPDVISALSITGNFTFHPCSHGDFLGSILGTGIAREKLGDIILQEDRGAQVVI

Query:  VPELVDFLVSSLRKVGNVTVSCTRIPLTALDYEPPKTKTFKTIEASLRVDALASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGR
        VPELVDFLVSSL KVGNVTVSCTRIPLT LDYEPPKTKTFKTIEASLRVDALASAGFKISRSKLVD ISSGDVRVNWT ITKNGTILKTGDIVSVSGKGR
Subjt:  VPELVDFLVSSLRKVGNVTVSCTRIPLTALDYEPPKTKTFKTIEASLRVDALASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGR

Query:  LKIGEINSTKKGKFAIELIRYV
        LKIGEIN TKKGKFA+ELIRYV
Subjt:  LKIGEINSTKKGKFAIELIRYV

XP_038899605.1 putative RNA-binding protein YlmH [Benincasa hispida]1.3e-16092.5Show/hide
Query:  MAATSIGTLWCLRRAAQASTFCSPFAANLNKLSFHEARFPSASSSPLGSSGTCQLLQAVKGDIDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNF
        MAATSIG  W LRRAAQ+S+F SP A NLNKLSFHEARFPS+ SSPLGSSG CQL+QAVKGDIDVLLNGVGDKGVIVDVKHILVMAKRSLSRR VLHTNF
Subjt:  MAATSIGTLWCLRRAAQASTFCSPFAANLNKLSFHEARFPSASSSPLGSSGTCQLLQAVKGDIDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNF

Query:  LTPPVVKESMLALQKLADVKAIAQGGYPEAERCRISVGHADELTSDPDVISALSITGNFTFHPCSHGDFLGSILGTGIAREKLGDIILQEDRGAQVVIVP
        LTPPVVKES+LALQKLADVKAIAQGGYPEAERCRISVGHADEL SDPD++SALSITGNF FHPCSHGDFLG+ILGTGIAREKLGDIILQE++GAQVV+VP
Subjt:  LTPPVVKESMLALQKLADVKAIAQGGYPEAERCRISVGHADELTSDPDVISALSITGNFTFHPCSHGDFLGSILGTGIAREKLGDIILQEDRGAQVVIVP

Query:  ELVDFLVSSLRKVGNVTVSCTRIPLTALDYEPPKTKTFKTIEASLRVDALASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGRLK
        ELVDFL SSLRKVGNVTVSCTRIPLTALDYEPPKTKTFKTIEASLRVDALASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGRLK
Subjt:  ELVDFLVSSLRKVGNVTVSCTRIPLTALDYEPPKTKTFKTIEASLRVDALASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGRLK

Query:  IGEINSTKKGKFAIELIRYV
        IGEINSTKKGKFA+ELIRYV
Subjt:  IGEINSTKKGKFAIELIRYV

TrEMBL top hitse value%identityAlignment
A0A0A0LC56 S4 RNA-binding domain-containing protein5.1e-15589.75Show/hide
Query:  LTMAATSIGTLWCLRRAAQASTFCSPFAANLNKLSFHEARFPSASSSPLGSSGTCQLLQAVKGDIDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHT
        +   ATSI  LW LRRAAQ S+F  P A NLN+L F+EARFP   SSPLG+SG CQL+QAVKGDIDVLLNGVGDKGVIVDVK ILVMAKRSLSRREVLHT
Subjt:  LTMAATSIGTLWCLRRAAQASTFCSPFAANLNKLSFHEARFPSASSSPLGSSGTCQLLQAVKGDIDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHT

Query:  NFLTPPVVKESMLALQKLADVKAIAQGGYPEAERCRISVGHADELTSDPDVISALSITGNFTFHPCSHGDFLGSILGTGIAREKLGDIILQEDRGAQVVI
        NFLTPPVVKESMLA+QKLADVKAIAQGGYPEAERCRISVGHADELTSDPD+ISALSITGNFTFHPCSHGDFLGSILGTGIAREKLGDI+LQE+ GAQVVI
Subjt:  NFLTPPVVKESMLALQKLADVKAIAQGGYPEAERCRISVGHADELTSDPDVISALSITGNFTFHPCSHGDFLGSILGTGIAREKLGDIILQEDRGAQVVI

Query:  VPELVDFLVSSLRKVGNVTVSCTRIPLTALDYEPPKTKTFKTIEASLRVDALASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGR
        VPELVDFL+SSLRKVGNVTVSCTRIPLTAL+YEPPKTKTFKTIEASLRVDA+ASAGFKISRSKLVDLISSGDVRVNWT ITKNGTILKTGDIVSVSGKGR
Subjt:  VPELVDFLVSSLRKVGNVTVSCTRIPLTALDYEPPKTKTFKTIEASLRVDALASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGR

Query:  LKIGEINSTKKGKFAIELIRYV
        LKIGEINSTKKGKFA+ELIRYV
Subjt:  LKIGEINSTKKGKFAIELIRYV

A0A1S3C3I2 putative RNA-binding protein YlmH isoform X22.5e-15488.82Show/hide
Query:  LTMAATSIGTLWCLRRAAQASTFCSPFAANLNKLSFHEARFPSASSSPLGSSGTCQLLQAVKGDIDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHT
        +    T+IG LW LR A+Q S+F  P   NLN+L FHE RFP   SSPLG+SG CQL+QAVKGDIDVLLNGVGDKGVIVDVK ILVMAKRSLSRREVLHT
Subjt:  LTMAATSIGTLWCLRRAAQASTFCSPFAANLNKLSFHEARFPSASSSPLGSSGTCQLLQAVKGDIDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHT

Query:  NFLTPPVVKESMLALQKLADVKAIAQGGYPEAERCRISVGHADELTSDPDVISALSITGNFTFHPCSHGDFLGSILGTGIAREKLGDIILQEDRGAQVVI
        NFLTPPVVKESMLA+QKLADVKAIAQGGYPEAERCRISVGH+DELTSDPD+ISALSITGNFTFHPCSHGDFLGSILGTGIAREKLGDII+QE+ GAQVVI
Subjt:  NFLTPPVVKESMLALQKLADVKAIAQGGYPEAERCRISVGHADELTSDPDVISALSITGNFTFHPCSHGDFLGSILGTGIAREKLGDIILQEDRGAQVVI

Query:  VPELVDFLVSSLRKVGNVTVSCTRIPLTALDYEPPKTKTFKTIEASLRVDALASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGR
        VPELVDFL+SSLRKVGNVTVSCTRIPLTAL+YEPPKTKTFKTIEASLRVDALASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGR
Subjt:  VPELVDFLVSSLRKVGNVTVSCTRIPLTALDYEPPKTKTFKTIEASLRVDALASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGR

Query:  LKIGEINSTKKGKFAIELIRYV
        LKIGEINSTKKGKFA+ELIRYV
Subjt:  LKIGEINSTKKGKFAIELIRYV

A0A6J1CP18 uncharacterized protein LOC111012786 isoform X14.6e-15690.31Show/hide
Query:  MAATSIGTLWCLRRAAQASTFCSPFAANLNKLSFHEARFPSASSSPLGSSGTCQLLQAVKGDIDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNF
        MAATSIG LW LRRAAQAS+F  P A N   LSFH+ARFP + SSP GSSG CQL+QAVKGDIDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNF
Subjt:  MAATSIGTLWCLRRAAQASTFCSPFAANLNKLSFHEARFPSASSSPLGSSGTCQLLQAVKGDIDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNF

Query:  LTPPVVKESMLALQKLADVKAIAQGGYPEAERCRISVGHADELTSDPDVISALSITGNFTFHPCSHGDFLGSILGTGIAREKLGDIILQEDRGAQVVIVP
        LTPPVVKESMLA+QKLADVKAIAQGGYPEAERCRISVGHADELTSDPD+ISALSITGNFTFHPCSHGDFLGSILGTGIAREKLGDIILQ + GAQVV+VP
Subjt:  LTPPVVKESMLALQKLADVKAIAQGGYPEAERCRISVGHADELTSDPDVISALSITGNFTFHPCSHGDFLGSILGTGIAREKLGDIILQEDRGAQVVIVP

Query:  ELVDFLVSSLRKVGNVTVSCTRIPLTALDYEPPKTKTFKTIEASLRVDALASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGRLK
        ELVDFL+SSLRKVGNVTVSCTRIPLTALDYEPPKTKTF TIEASLRVDA+ASAGFKISRSKLVDLISSGDVRVNWTP+TKNGT LKTGD+VSVSGKGRLK
Subjt:  ELVDFLVSSLRKVGNVTVSCTRIPLTALDYEPPKTKTFKTIEASLRVDALASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGRLK

Query:  IGEINSTKKGKFAIELIRYV
        IGEINSTKKGKF++ELIRYV
Subjt:  IGEINSTKKGKFAIELIRYV

A0A6J1FU11 uncharacterized protein LOC111446880 isoform X28.7e-15588.82Show/hide
Query:  LTMAATSIGTLWCLRRAAQASTFCSPFAANLNKLSFHEARFPSASSSPLGSSGTCQLLQAVKGDIDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHT
        +  A  SIG LW LRRAA++S+F +P A NL K+SFHEARFPS+ SSPLG+SG CQL+QAVKGDIDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHT
Subjt:  LTMAATSIGTLWCLRRAAQASTFCSPFAANLNKLSFHEARFPSASSSPLGSSGTCQLLQAVKGDIDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHT

Query:  NFLTPPVVKESMLALQKLADVKAIAQGGYPEAERCRISVGHADELTSDPDVISALSITGNFTFHPCSHGDFLGSILGTGIAREKLGDIILQEDRGAQVVI
        NFLTPPVVKESMLA+QKLADVKAIAQGGYPEAERCRISVGHADELTSDPDV+SALSITGNF F  C+HGDFLG+ILGTGIAREKLGDIILQE++GAQVVI
Subjt:  NFLTPPVVKESMLALQKLADVKAIAQGGYPEAERCRISVGHADELTSDPDVISALSITGNFTFHPCSHGDFLGSILGTGIAREKLGDIILQEDRGAQVVI

Query:  VPELVDFLVSSLRKVGNVTVSCTRIPLTALDYEPPKTKTFKTIEASLRVDALASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGR
        VPELVDFLVSSLRKVGNVTVSCTRIPLT LDYEPPKTKTFKTIEASLRVDALASAGFKISRSKLVD IS GDVRVNWT ITKNGTILKTGDIVSVSGKGR
Subjt:  VPELVDFLVSSLRKVGNVTVSCTRIPLTALDYEPPKTKTFKTIEASLRVDALASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGR

Query:  LKIGEINSTKKGKFAIELIRYV
        LKIGEIN TKKGKFAIELI+YV
Subjt:  LKIGEINSTKKGKFAIELIRYV

A0A6J1J103 uncharacterized protein LOC111480897 isoform X13.9e-15588.82Show/hide
Query:  LTMAATSIGTLWCLRRAAQASTFCSPFAANLNKLSFHEARFPSASSSPLGSSGTCQLLQAVKGDIDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHT
        +  A  SIG LW LRRAAQ+S+  +P A NL+K+SFHEARFP++ SSPLGSSG CQL+QAVKGDIDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHT
Subjt:  LTMAATSIGTLWCLRRAAQASTFCSPFAANLNKLSFHEARFPSASSSPLGSSGTCQLLQAVKGDIDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHT

Query:  NFLTPPVVKESMLALQKLADVKAIAQGGYPEAERCRISVGHADELTSDPDVISALSITGNFTFHPCSHGDFLGSILGTGIAREKLGDIILQEDRGAQVVI
        NFLTPPVVKESMLA++KLADVKAIAQGGYPEAERCRISVGHADELTSDPDV+SALSITGNF FH C+HGDFLG+ILGTGIAREKLGDIILQE++GAQVVI
Subjt:  NFLTPPVVKESMLALQKLADVKAIAQGGYPEAERCRISVGHADELTSDPDVISALSITGNFTFHPCSHGDFLGSILGTGIAREKLGDIILQEDRGAQVVI

Query:  VPELVDFLVSSLRKVGNVTVSCTRIPLTALDYEPPKTKTFKTIEASLRVDALASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGR
        VPELVDFLVSSL KVGNVTVSCTRIPLT LDYEPPKTKTFKTIEASLRVDALASAGFKISRSKLVD ISSGDVRVNWT ITKNGTILKTGDIVSVSGKGR
Subjt:  VPELVDFLVSSLRKVGNVTVSCTRIPLTALDYEPPKTKTFKTIEASLRVDALASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGR

Query:  LKIGEINSTKKGKFAIELIRYV
        LKIGEIN TKKGKFA+ELIRYV
Subjt:  LKIGEINSTKKGKFAIELIRYV

SwissProt top hitse value%identityAlignment
P71020 Putative RNA-binding protein YlmH4.3e-1829.65Show/hide
Query:  TNFLTPPVVKESML--ALQKLADVKAIAQGGYPEAERCRISVGHADELTSDPD--VISALSITGNFTFHPCSHGDFLGSILGTGIAREKLGDIILQEDRG
        T+FL P   +E ++  A+   ADV     GGY  AER R ++   + +T +     + A ++     F    H   LG+++G G+ R+K GDI+  E   
Subjt:  TNFLTPPVVKESML--ALQKLADVKAIAQGGYPEAERCRISVGHADELTSDPD--VISALSITGNFTFHPCSHGDFLGSILGTGIAREKLGDIILQEDRG

Query:  AQVVIVPELVDFLVSSLRKVGNVTVSCTRIPLTALDYEPPKTKTFKTIEASLRVDALASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSV
         Q+++  +  DF+ + L + G   VS  +I L+ L+      +      +SLR+DA+ ++  + SR K   L+ +G V+VNW  +     I+  GD++S+
Subjt:  AQVVIVPELVDFLVSSLRKVGNVTVSCTRIPLTALDYEPPKTKTFKTIEASLRVDALASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSV

Query:  SGKGRLKIGEI-NSTKKGKFAIELIR
         G GR  + +I   TKK K+ +   R
Subjt:  SGKGRLKIGEI-NSTKKGKFAIELIR

Arabidopsis top hitse value%identityAlignment
AT1G53120.1 RNA-binding S4 domain-containing protein2.5e-11765.62Show/hide
Query:  MAATSIGTLWCLRRAAQASTFCSPFAANLNKLSFHEARFPSASSSPLGSSGTCQLLQAVKGDIDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNF
        MA TS+   W + R A  S   S       K        P++      +   C   +A+KGD+D LL GVGD+ V  +VK IL MA+R+ S+REVLHT+F
Subjt:  MAATSIGTLWCLRRAAQASTFCSPFAANLNKLSFHEARFPSASSSPLGSSGTCQLLQAVKGDIDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNF

Query:  LTPPVVKESMLALQKLADVKAIAQGGYPEAERCRISVGHADELTSDPDVISALSITGNFTFHPCSHGDFLGSILGTGIAREKLGDIILQEDRGAQVVIVP
        LTPP+VKES+  L+K ADVK +AQGGYPEAERCRIS+GH D LTSDPD+++ALSITGNF F PCSHGDFLG+ILGTGI+REKLGDI++QE++GAQV+IVP
Subjt:  LTPPVVKESMLALQKLADVKAIAQGGYPEAERCRISVGHADELTSDPDVISALSITGNFTFHPCSHGDFLGSILGTGIAREKLGDIILQEDRGAQVVIVP

Query:  ELVDFLVSSLRKVGNVTVSCTRIPLTALDYEPPKTKTFKTIEASLRVDALASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGRLK
        ELVDF+V++L KVGNV V+C++IPL AL+YEPP+T +FKT+EASLR+DA+ASAGFKISRSKLVDLISS DVRVNW  +TKNGTI+KTGD+VSVSGKGRLK
Subjt:  ELVDFLVSSLRKVGNVTVSCTRIPLTALDYEPPKTKTFKTIEASLRVDALASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGRLK

Query:  IGEINSTKKGKFAIELIRYV
        IGEIN TKKGKFA+E+IRY+
Subjt:  IGEINSTKKGKFAIELIRYV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTAAGTCAGAAAACGAAAGGAGGAGAGCAAGAGAGCAAGAGGAGAGAGTAGGGAATAGAGTTCGGGATCCTTTCTTCAGTGACGAAGAAGGGTTTAAATACTTGCT
CATGCTCCTAGGGTTTTTAGGAATTCGGAGGTGTTTCGGGACAAACCAGACGGAATCGGGGCGGCCAGAGGCAACAGTGACCAAACGGAGGCGTGCACGGGCCGACCATA
TGGGTCGGGCCAAGTTGGCCAGACCCTTTGGTCTGACTGACGAAGTTCGCTGCTCACTGACAATGGCCGCAACGAGCATTGGAACTCTGTGGTGTCTAAGAAGAGCAGCC
CAAGCTTCGACTTTCTGCAGTCCCTTTGCCGCTAACCTCAACAAGCTCTCCTTCCACGAGGCTCGCTTTCCCTCTGCTTCATCTTCTCCTCTTGGCTCCTCAGGAACATG
CCAATTACTACAAGCTGTAAAGGGGGACATTGATGTTTTACTTAATGGAGTTGGAGATAAAGGTGTTATTGTAGACGTGAAACATATTCTTGTGATGGCCAAACGTTCAT
TATCAAGACGAGAAGTTCTTCATACGAACTTTCTCACCCCACCTGTGGTGAAAGAGTCAATGCTAGCTTTACAAAAACTAGCTGACGTGAAAGCAATAGCTCAGGGAGGA
TACCCAGAGGCAGAGCGCTGCCGGATTTCTGTTGGGCATGCAGATGAACTAACAAGTGATCCAGACGTAATTTCGGCATTGAGTATCACAGGAAATTTTACGTTTCACCC
TTGTTCACATGGGGACTTCCTTGGATCAATTCTTGGTACAGGCATTGCTAGGGAAAAGCTTGGTGATATCATACTCCAGGAAGATAGGGGAGCTCAAGTAGTCATTGTTC
CAGAACTTGTTGACTTCCTTGTATCATCACTGCGTAAGGTTGGCAATGTCACAGTTTCTTGTACAAGGATTCCATTGACAGCTCTTGATTACGAACCACCGAAGACCAAG
ACATTTAAAACCATAGAGGCATCTCTTAGGGTGGATGCTCTAGCAAGTGCTGGATTCAAGATTTCACGGTCTAAACTAGTGGATTTGATCAGCAGTGGTGATGTTCGTGT
CAATTGGACGCCAATTACAAAAAATGGAACCATACTAAAGACTGGTGATATTGTTTCTGTTAGTGGGAAAGGGAGACTAAAGATTGGAGAAATAAATTCTACAAAAAAGG
GAAAATTTGCTATTGAGCTTATCAGGTATGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTAAGTCAGAAAACGAAAGGAGGAGAGCAAGAGAGCAAGAGGAGAGAGTAGGGAATAGAGTTCGGGATCCTTTCTTCAGTGACGAAGAAGGGTTTAAATACTTGCT
CATGCTCCTAGGGTTTTTAGGAATTCGGAGGTGTTTCGGGACAAACCAGACGGAATCGGGGCGGCCAGAGGCAACAGTGACCAAACGGAGGCGTGCACGGGCCGACCATA
TGGGTCGGGCCAAGTTGGCCAGACCCTTTGGTCTGACTGACGAAGTTCGCTGCTCACTGACAATGGCCGCAACGAGCATTGGAACTCTGTGGTGTCTAAGAAGAGCAGCC
CAAGCTTCGACTTTCTGCAGTCCCTTTGCCGCTAACCTCAACAAGCTCTCCTTCCACGAGGCTCGCTTTCCCTCTGCTTCATCTTCTCCTCTTGGCTCCTCAGGAACATG
CCAATTACTACAAGCTGTAAAGGGGGACATTGATGTTTTACTTAATGGAGTTGGAGATAAAGGTGTTATTGTAGACGTGAAACATATTCTTGTGATGGCCAAACGTTCAT
TATCAAGACGAGAAGTTCTTCATACGAACTTTCTCACCCCACCTGTGGTGAAAGAGTCAATGCTAGCTTTACAAAAACTAGCTGACGTGAAAGCAATAGCTCAGGGAGGA
TACCCAGAGGCAGAGCGCTGCCGGATTTCTGTTGGGCATGCAGATGAACTAACAAGTGATCCAGACGTAATTTCGGCATTGAGTATCACAGGAAATTTTACGTTTCACCC
TTGTTCACATGGGGACTTCCTTGGATCAATTCTTGGTACAGGCATTGCTAGGGAAAAGCTTGGTGATATCATACTCCAGGAAGATAGGGGAGCTCAAGTAGTCATTGTTC
CAGAACTTGTTGACTTCCTTGTATCATCACTGCGTAAGGTTGGCAATGTCACAGTTTCTTGTACAAGGATTCCATTGACAGCTCTTGATTACGAACCACCGAAGACCAAG
ACATTTAAAACCATAGAGGCATCTCTTAGGGTGGATGCTCTAGCAAGTGCTGGATTCAAGATTTCACGGTCTAAACTAGTGGATTTGATCAGCAGTGGTGATGTTCGTGT
CAATTGGACGCCAATTACAAAAAATGGAACCATACTAAAGACTGGTGATATTGTTTCTGTTAGTGGGAAAGGGAGACTAAAGATTGGAGAAATAAATTCTACAAAAAAGG
GAAAATTTGCTATTGAGCTTATCAGGTATGTGTGA
Protein sequenceShow/hide protein sequence
MLKSENERRRAREQEERVGNRVRDPFFSDEEGFKYLLMLLGFLGIRRCFGTNQTESGRPEATVTKRRRARADHMGRAKLARPFGLTDEVRCSLTMAATSIGTLWCLRRAA
QASTFCSPFAANLNKLSFHEARFPSASSSPLGSSGTCQLLQAVKGDIDVLLNGVGDKGVIVDVKHILVMAKRSLSRREVLHTNFLTPPVVKESMLALQKLADVKAIAQGG
YPEAERCRISVGHADELTSDPDVISALSITGNFTFHPCSHGDFLGSILGTGIAREKLGDIILQEDRGAQVVIVPELVDFLVSSLRKVGNVTVSCTRIPLTALDYEPPKTK
TFKTIEASLRVDALASAGFKISRSKLVDLISSGDVRVNWTPITKNGTILKTGDIVSVSGKGRLKIGEINSTKKGKFAIELIRYV